Vinay S Swamy, Temesgen D Fufa, Robert B Hufnagel, David M McGaughey. Gigascience 2021
Times Cited: 2
Times Cited: 2
Times Cited
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Efficient integration of heterogeneous single-cell transcriptomes using Scanorama.
Brian Hie, Bryan Bryson, Bonnie Berger. Nat Biotechnol 2019
Brian Hie, Bryan Bryson, Bonnie Berger. Nat Biotechnol 2019
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Gerrit Grieb, Guy Steffens, Norbert Pallua, Jürgen Bernhagen, Richard Bucala. Int Rev Cell Mol Biol 2011
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Tim Stuart, Andrew Butler, Paul Hoffman, Christoph Hafemeister, Efthymia Papalexi, William M Mauck, Yuhan Hao, Marlon Stoeckius, Peter Smibert, Rahul Satija. Cell 2019
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Ronald A Reilkoff, Richard Bucala, Erica L Herzog. Nat Rev Immunol 2011
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Integrating single-cell transcriptomic data across different conditions, technologies, and species.
Andrew Butler, Paul Hoffman, Peter Smibert, Efthymia Papalexi, Rahul Satija. Nat Biotechnol 2018
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MAST: a flexible statistical framework for assessing transcriptional changes and characterizing heterogeneity in single-cell RNA sequencing data.
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Alexander Lachmann, Denis Torre, Alexandra B Keenan, Kathleen M Jagodnik, Hoyjin J Lee, Lily Wang, Moshe C Silverstein, Avi Ma'ayan. Nat Commun 2018
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Prostaglandin E2 hydrogel improves cutaneous wound healing via M2 macrophages polarization.
Shuaiqiang Zhang, Yuanyuan Liu, Xin Zhang, Dashuai Zhu, Xin Qi, Xiaocang Cao, Yihu Fang, Yongzhe Che, Zhong-Chao Han, Zuo-Xiang He,[...]. Theranostics 2018
Shuaiqiang Zhang, Yuanyuan Liu, Xin Zhang, Dashuai Zhu, Xin Qi, Xiaocang Cao, Yihu Fang, Yongzhe Che, Zhong-Chao Han, Zuo-Xiang He,[...]. Theranostics 2018
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Fast, sensitive and accurate integration of single-cell data with Harmony.
Ilya Korsunsky, Nghia Millard, Jean Fan, Kamil Slowikowski, Fan Zhang, Kevin Wei, Yuriy Baglaenko, Michael Brenner, Po-Ru Loh, Soumya Raychaudhuri. Nat Methods 2019
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alona: a web server for single-cell RNA-seq analysis.
Oscar Franzén, Johan L M Björkegren. Bioinformatics 2020
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Benchmarking atlas-level data integration in single-cell genomics.
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GSVA: gene set variation analysis for microarray and RNA-seq data.
Sonja Hänzelmann, Robert Castelo, Justin Guinney. BMC Bioinformatics 2013
Sonja Hänzelmann, Robert Castelo, Justin Guinney. BMC Bioinformatics 2013
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Nebulosa recovers single cell gene expression signals by kernel density estimation.
Jose Alquicira-Hernandez, Joseph E Powell. Bioinformatics 2021
Jose Alquicira-Hernandez, Joseph E Powell. Bioinformatics 2021
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Hedgehog stimulates hair follicle neogenesis by creating inductive dermis during murine skin wound healing.
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PanglaoDB: a web server for exploration of mouse and human single-cell RNA sequencing data.
Oscar Franzén, Li-Ming Gan, Johan L M Björkegren. Database (Oxford) 2019
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The Achilles' heel of senescent cells: from transcriptome to senolytic drugs.
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Transfer learning of clinical outcomes from preclinical molecular data, principles and perspectives.
Axel Kowald, Israel Barrantes, Steffen Möller, Daniel Palmer, Hugo Murua Escobar, Anne Schwerk, Georg Fuellen. Brief Bioinform 2022
Axel Kowald, Israel Barrantes, Steffen Möller, Daniel Palmer, Hugo Murua Escobar, Anne Schwerk, Georg Fuellen. Brief Bioinform 2022
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Exploration of databases and methods supporting drug repurposing: a comprehensive survey.
Ziaurrehman Tanoli, Umair Seemab, Andreas Scherer, Krister Wennerberg, Jing Tang, Markus Vähä-Koskela. Brief Bioinform 2021
Ziaurrehman Tanoli, Umair Seemab, Andreas Scherer, Krister Wennerberg, Jing Tang, Markus Vähä-Koskela. Brief Bioinform 2021
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Gene expression profile in human trabecular meshwork from patients with primary open-angle glaucoma.
Yutao Liu, R Rand Allingham, Xuejun Qin, David Layfield, Andrew E Dellinger, Jason Gibson, Joshua Wheeler, Allison E Ashley-Koch, W Daniel Stamer, Michael A Hauser. Invest Ophthalmol Vis Sci 2013
Yutao Liu, R Rand Allingham, Xuejun Qin, David Layfield, Andrew E Dellinger, Jason Gibson, Joshua Wheeler, Allison E Ashley-Koch, W Daniel Stamer, Michael A Hauser. Invest Ophthalmol Vis Sci 2013
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Intraocular Pressure-Lowering Effects of Trabeculectomy Versus MicroShunt Insertion in Rabbit Eyes.
Tomokazu Fujimoto, Kei-Ichi Nakashima, Fumika Watanabe-Kitamura, Takahiro Watanabe, Kenichi Nakamura, Kentaro Maki, Atsushi Shimazaki, Masatomo Kato, Hidenobu Tanihara, Toshihiro Inoue. Transl Vis Sci Technol 2021
Tomokazu Fujimoto, Kei-Ichi Nakashima, Fumika Watanabe-Kitamura, Takahiro Watanabe, Kenichi Nakamura, Kentaro Maki, Atsushi Shimazaki, Masatomo Kato, Hidenobu Tanihara, Toshihiro Inoue. Transl Vis Sci Technol 2021
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Cellular crosstalk regulates the aqueous humor outflow pathway and provides new targets for glaucoma therapies.
Benjamin R Thomson, Pan Liu, Tuncer Onay, Jing Du, Stuart W Tompson, Sol Misener, Raj R Purohit, Terri L Young, Jing Jin, Susan E Quaggin. Nat Commun 2021
Benjamin R Thomson, Pan Liu, Tuncer Onay, Jing Du, Stuart W Tompson, Sol Misener, Raj R Purohit, Terri L Young, Jing Jin, Susan E Quaggin. Nat Commun 2021
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Transcriptome analysis reveals autophagy as regulator of TGFβ/Smad-induced fibrogenesis in trabecular meshwork cells.
April Nettesheim, Myoung Sup Shim, Josh Hirt, Paloma B Liton. Sci Rep 2019
April Nettesheim, Myoung Sup Shim, Josh Hirt, Paloma B Liton. Sci Rep 2019
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Mapping the origin and fate of myeloid cells in distinct compartments of the eye by single-cell profiling.
Peter Wieghofer, Nora Hagemeyer, Roman Sankowski, Anja Schlecht, Ori Staszewski, Lukas Amann, Markus Gruber, Jana Koch, Annika Hausmann, Peipei Zhang,[...]. EMBO J 2021
Peter Wieghofer, Nora Hagemeyer, Roman Sankowski, Anja Schlecht, Ori Staszewski, Lukas Amann, Markus Gruber, Jana Koch, Annika Hausmann, Peipei Zhang,[...]. EMBO J 2021
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Commonalities of optic nerve injury and glaucoma-induced neurodegeneration: Insights from transcriptome-wide studies.
Jiaxing Wang, Felix L Struebing, Eldon E Geisert. Exp Eye Res 2021
Jiaxing Wang, Felix L Struebing, Eldon E Geisert. Exp Eye Res 2021
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DNA Methylation Analysis of Human Trabecular Meshwork Cells During Dexamethasone Stimulation.
Akira Matsuda, Yosuke Asada, Kanae Takakuwa, Jobu Sugita, Akira Murakami, Nobuyuki Ebihara. Invest Ophthalmol Vis Sci 2015
Akira Matsuda, Yosuke Asada, Kanae Takakuwa, Jobu Sugita, Akira Murakami, Nobuyuki Ebihara. Invest Ophthalmol Vis Sci 2015
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Molecular taxonomy of human ocular outflow tissues defined by single-cell transcriptomics.
Gaurang Patel, Wen Fury, Hua Yang, Maria Gomez-Caraballo, Yu Bai, Tao Yang, Christina Adler, Yi Wei, Min Ni, Heather Schmitt,[...]. Proc Natl Acad Sci U S A 2020
Gaurang Patel, Wen Fury, Hua Yang, Maria Gomez-Caraballo, Yu Bai, Tao Yang, Christina Adler, Yi Wei, Min Ni, Heather Schmitt,[...]. Proc Natl Acad Sci U S A 2020
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Role of miR-29b on the regulation of the extracellular matrix in human trabecular meshwork cells under chronic oxidative stress.
Coralia Luna, Guorong Li, Jianmimg Qiu, David L Epstein, Pedro Gonzalez. Mol Vis 2009
Coralia Luna, Guorong Li, Jianmimg Qiu, David L Epstein, Pedro Gonzalez. Mol Vis 2009
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Ocular fibroblast types differ in their mRNA profiles--implications for fibrosis prevention after aqueous shunt implantation.
Marian Löbler, Diana Buß, Christian Kastner, Jörg Mostertz, Georg Homuth, Mathias Ernst, Rudolf Guthoff, Andreas Wree, Thomas Stahnke, Georg Fuellen,[...]. Mol Vis 2013
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Suppression of the TGF-β pathway by a macrolide antibiotic decreases fibrotic responses by ocular fibroblasts in vitro.
Thomas Stahnke, Beata Gajda-Deryło, Anselm G Jünemann, Oliver Stachs, Katharina A Sterenczak, Robert Rejdak, Julia Beck, Ekkehard Schütz, Steffen Möller, Israel Barrantes,[...]. R Soc Open Sci 2020
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Comparison of Glaucoma-Relevant Transcriptomic Datasets Identifies Novel Drug Targets for Retinal Ganglion Cell Neuroprotection.
Tim J Enz, James R Tribble, Pete A Williams. J Clin Med 2021
Tim J Enz, James R Tribble, Pete A Williams. J Clin Med 2021
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Overexpression and Activation of αvβ3 Integrin Differentially Affects TGFβ2 Signaling in Human Trabecular Meshwork Cells.
Mark S Filla, Kristy K Meyer, Jennifer A Faralli, Donna M Peters. Cells 2021
Mark S Filla, Kristy K Meyer, Jennifer A Faralli, Donna M Peters. Cells 2021
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RNA-sequencing in ophthalmology research: considerations for experimental design and analysis.
Nicholas Owen, Mariya Moosajee. Ther Adv Ophthalmol 2019
Nicholas Owen, Mariya Moosajee. Ther Adv Ophthalmol 2019
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Alteration of gene expression in mice after glaucoma filtration surgery.
Keisuke Adachi, Yosuke Asada, Toshiaki Hirakata, Miki Onoue, Satoshi Iwamoto, Toshimitsu Kasuga, Akira Matsuda. Sci Rep 2020
Keisuke Adachi, Yosuke Asada, Toshiaki Hirakata, Miki Onoue, Satoshi Iwamoto, Toshimitsu Kasuga, Akira Matsuda. Sci Rep 2020
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The Molecular Processes in the Trabecular Meshwork After Exposure to Corticosteroids and in Corticosteroid-Induced Ocular Hypertension.
Ilona Liesenborghs, Lars M T Eijssen, Martina Kutmon, Theo G M F Gorgels, Chris T Evelo, Henny J M Beckers, Carroll A B Webers, Johannes S A G Schouten. Invest Ophthalmol Vis Sci 2020
Ilona Liesenborghs, Lars M T Eijssen, Martina Kutmon, Theo G M F Gorgels, Chris T Evelo, Henny J M Beckers, Carroll A B Webers, Johannes S A G Schouten. Invest Ophthalmol Vis Sci 2020
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Conjunctival fibrosis following filtering glaucoma surgery.
Günther Schlunck, Tobias Meyer-ter-Vehn, Thomas Klink, Franz Grehn. Exp Eye Res 2016
Günther Schlunck, Tobias Meyer-ter-Vehn, Thomas Klink, Franz Grehn. Exp Eye Res 2016
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Cell atlas of aqueous humor outflow pathways in eyes of humans and four model species provides insight into glaucoma pathogenesis.
Tavé van Zyl, Wenjun Yan, Alexi McAdams, Yi-Rong Peng, Karthik Shekhar, Aviv Regev, Dejan Juric, Joshua R Sanes. Proc Natl Acad Sci U S A 2020
Tavé van Zyl, Wenjun Yan, Alexi McAdams, Yi-Rong Peng, Karthik Shekhar, Aviv Regev, Dejan Juric, Joshua R Sanes. Proc Natl Acad Sci U S A 2020
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Single-cell RNA-sequencing analysis of the ciliary epithelium and contiguous tissues in the mouse eye.
J C Youkilis, S Bassnett. Exp Eye Res 2021
J C Youkilis, S Bassnett. Exp Eye Res 2021
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Gene expression profiles of human trabecular meshwork cells induced by triamcinolone and dexamethasone.
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The FAIR Guiding Principles for scientific data management and stewardship.
Mark D Wilkinson, Michel Dumontier, I Jsbrand Jan Aalbersberg, Gabrielle Appleton, Myles Axton, Arie Baak, Niklas Blomberg, Jan-Willem Boiten, Luiz Bonino da Silva Santos, Philip E Bourne,[...]. Sci Data 2016
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Transcriptome-wide study of the response of human trabecular meshwork cells to the substrate stiffness increase.
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Alterations in gene expression induced by cyclic mechanical stress in trabecular meshwork cells.
Coralia Luna, Guorong Li, Paloma B Liton, David L Epstein, Pedro Gonzalez. Mol Vis 2009
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Modulation of wound healing during and after glaucoma surgery.
Stelios Georgoulas, Annegret Dahlmann-Noor, Stephen Brocchini, Peng Tee Khaw. Prog Brain Res 2008
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Steroid-induced ocular hypertension/glaucoma: Focus on pharmacogenomics and implications for precision medicine.
M Elizabeth Fini, Stephen G Schwartz, Xiaoyi Gao, Shinwu Jeong, Nitin Patel, Tatsuo Itakura, Marianne O Price, Francis W Price, Rohit Varma, W Daniel Stamer. Prog Retin Eye Res 2017
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Implementation and relevance of FAIR data principles in biopharmaceutical R&D.
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An omics perspective on drug target discovery platforms.
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Glucocorticoids with different chemical structures but similar glucocorticoid receptor potency regulate subsets of common and unique genes in human trabecular meshwork cells.
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Primary cilia and the reciprocal activation of AKT and SMAD2/3 regulate stretch-induced autophagy in trabecular meshwork cells.
Myoung Sup Shim, April Nettesheim, Angela Dixon, Paloma B Liton. Proc Natl Acad Sci U S A 2021
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Up-regulated expression of extracellular matrix remodeling genes in phagocytically challenged trabecular meshwork cells.
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Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.