A citation-based method for searching scientific literature

Anne Strigli, Shreya Gopalakrishnan, Yvonne Zeissig, Marijana Basic, Jun Wang, Tobias Schwerd, Shauni Doms, Kenneth Peuker, Jelka Hartwig, Jürgen Harder, Pia Hönscheid, Philipp Arnold, Thomas Kurth, Fabian Rost, Britt-Sabina Petersen, Michael Forster, Andre Franke, Judith R Kelsen, Meino Rohlfs, Christoph Klein, Aleixo M Muise, Neil Warner, Ryusuke Nambu, Julia Mayerle, Helga-Paula Török, Andreas Linkermann, Michael H Muders, Gustavo B Baretton, Jochen Hampe, Daniela E Aust, John F Baines, André Bleich, Sebastian Zeissig. Sci Immunol 2021
Times Cited: 2







List of co-cited articles
3 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Hematopoietic Cell Transplantation Rescues Inflammatory Bowel Disease and Dysbiosis of Gut Microbiota in XIAP Deficiency.
Shintaro Ono, Kozue Takeshita, Yuko Kiridoshi, Motohiro Kato, Takahiro Kamiya, Akihiro Hoshino, Masakatsu Yanagimachi, Katsuhiro Arai, Ichiro Takeuchi, Nariaki Toita,[...]. J Allergy Clin Immunol Pract 2021
6
100

XIAP deficiency in humans causes an X-linked lymphoproliferative syndrome.
Stéphanie Rigaud, Marie-Claude Fondanèche, Nathalie Lambert, Benoit Pasquier, Véronique Mateo, Pauline Soulas, Lionel Galicier, Françoise Le Deist, Frédéric Rieux-Laucat, Patrick Revy,[...]. Nature 2006
468
100

Biallelic RIPK1 mutations in humans cause severe immunodeficiency, arthritis, and intestinal inflammation.
Delphine Cuchet-Lourenço, Davide Eletto, Changxin Wu, Vincent Plagnol, Olivier Papapietro, James Curtis, Lourdes Ceron-Gutierrez, Chris M Bacon, Scott Hackett, Badr Alsaleem,[...]. Science 2018
106
100

Autophagy protein ATG16L1 prevents necroptosis in the intestinal epithelium.
Yu Matsuzawa-Ishimoto, Yusuke Shono, Luis E Gomez, Vanessa M Hubbard-Lucey, Michael Cammer, Jessica Neil, M Zahidunnabi Dewan, Sophia R Lieberman, Amina Lazrak, Jill M Marinis,[...]. J Exp Med 2017
134
50

Interleukin-1β (IL-1β) promotes susceptibility of Toll-like receptor 5 (TLR5) deficient mice to colitis.
Frederic A Carvalho, Ilke Nalbantoglu, Sophie Ortega-Fernandez, Jesse D Aitken, Yueju Su, Omry Koren, William A Walters, Rob Knight, Ruth E Ley, Matam Vijay-Kumar,[...]. Gut 2012
58
50

Activity of protein kinase RIPK3 determines whether cells die by necroptosis or apoptosis.
Kim Newton, Debra L Dugger, Katherine E Wickliffe, Neeraj Kapoor, M Cristina de Almagro, Domagoj Vucic, Laszlo Komuves, Ronald E Ferrando, Dorothy M French, Joshua Webster,[...]. Science 2014
408
50

Two tumour necrosis factor receptors: structure and function.
P Vandenabeele, W Declercq, R Beyaert, W Fiers. Trends Cell Biol 1995
697
50

The effect of host genetics on the gut microbiome.
Marc Jan Bonder, Alexander Kurilshikov, Ettje F Tigchelaar, Zlatan Mujagic, Floris Imhann, Arnau Vich Vila, Patrick Deelen, Tommi Vatanen, Melanie Schirmer, Sanne P Smeekens,[...]. Nat Genet 2016
363
50

Exogenous TNFR2 activation protects from acute GvHD via host T reg cell expansion.
Martin Chopra, Marlene Biehl, Tim Steinfatt, Andreas Brandl, Juliane Kums, Jorge Amich, Martin Vaeth, Janina Kuen, Rafaela Holtappels, Jürgen Podlech,[...]. J Exp Med 2016
101
50

Transcriptional risk scores link GWAS to eQTLs and predict complications in Crohn's disease.
Urko M Marigorta, Lee A Denson, Jeffrey S Hyams, Kajari Mondal, Jarod Prince, Thomas D Walters, Anne Griffiths, Joshua D Noe, Wallace V Crandall, Joel R Rosh,[...]. Nat Genet 2017
74
50

Environment dominates over host genetics in shaping human gut microbiota.
Daphna Rothschild, Omer Weissbrod, Elad Barkan, Alexander Kurilshikov, Tal Korem, David Zeevi, Paul I Costea, Anastasia Godneva, Iris N Kalka, Noam Bar,[...]. Nature 2018
948
50

Helicobacter infection decreases reproductive performance of IL10-deficient mice.
Julie M Sharp, Deborah A Vanderford, Maciej Chichlowski, Matthew H Myles, Laura P Hale. Comp Med 2008
15
50

Host-microbe interactions have shaped the genetic architecture of inflammatory bowel disease.
Luke Jostins, Stephan Ripke, Rinse K Weersma, Richard H Duerr, Dermot P McGovern, Ken Y Hui, James C Lee, L Philip Schumm, Yashoda Sharma, Carl A Anderson,[...]. Nature 2012
50

Paneth cells as a site of origin for intestinal inflammation.
Timon E Adolph, Michal F Tomczak, Lukas Niederreiter, Hyun-Jeong Ko, Janne Böck, Eduardo Martinez-Naves, Jonathan N Glickman, Markus Tschurtschenthaler, John Hartwig, Shuhei Hosomi,[...]. Nature 2013
429
50

Multi-omics of the gut microbial ecosystem in inflammatory bowel diseases.
Jason Lloyd-Price, Cesar Arze, Ashwin N Ananthakrishnan, Melanie Schirmer, Julian Avila-Pacheco, Tiffany W Poon, Elizabeth Andrews, Nadim J Ajami, Kevin S Bonham, Colin J Brislawn,[...]. Nature 2019
667
50

Metabolic syndrome and altered gut microbiota in mice lacking Toll-like receptor 5.
Matam Vijay-Kumar, Jesse D Aitken, Frederic A Carvalho, Tyler C Cullender, Simon Mwangi, Shanthi Srinivasan, Shanthi V Sitaraman, Rob Knight, Ruth E Ley, Andrew T Gewirtz. Science 2010
50

Tumour necrosis factor-alpha receptor 1 and 2 polymorphisms in inflammatory bowel disease and their association with response to infliximab.
M Pierik, S Vermeire, K V Steen, S Joossens, G Claessens, R Vlietinck, P Rutgeerts. Aliment Pharmacol Ther 2004
120
50


LC-MS/MS method for rapid and concomitant quantification of pro-inflammatory and pro-resolving polyunsaturated fatty acid metabolites.
Pauline Le Faouder, Vincent Baillif, Ian Spreadbury, Jean-Paul Motta, Perrine Rousset, Gerald Chêne, Charlotte Guigné, François Tercé, Stephen Vanner, Nathalie Vergnolle,[...]. J Chromatogr B Analyt Technol Biomed Life Sci 2013
126
50

Evaluation of changes in intestinal microbiota in Crohn's disease patients after anti-TNF alpha treatment.
Laura Sanchis-Artero, Juan Francisco Martínez-Blanch, Sergio Manresa-Vera, Ernesto Cortés-Castell, Marina Valls-Gandia, Marisa Iborra, Jose Maria Paredes-Arquiola, Maia Boscá-Watts, Jose Maria Huguet, Rafael Gil-Borrás,[...]. Sci Rep 2021
4
50


Dissecting Allele Architecture of Early Onset IBD Using High-Density Genotyping.
David J Cutler, Michael E Zwick, David T Okou, Sampath Prahalad, Thomas Walters, Stephen L Guthery, Marla Dubinsky, Robert Baldassano, Wallace V Crandall, Joel Rosh,[...]. PLoS One 2015
33
50

Tumor Necrosis Factor Receptor 2 Restricts the Pathogenicity of CD8(+) T Cells in Mice With Colitis.
Shivesh Punit, Philip E Dubé, Cambrian Y Liu, Nandini Girish, M Kay Washington, D Brent Polk. Gastroenterology 2015
31
50

Epithelial Toll-like receptors and their role in gut homeostasis and disease.
Juan F Burgueño, Maria T Abreu. Nat Rev Gastroenterol Hepatol 2020
91
50

Recognition of commensal microflora by toll-like receptors is required for intestinal homeostasis.
Seth Rakoff-Nahoum, Justin Paglino, Fatima Eslami-Varzaneh, Stephen Edberg, Ruslan Medzhitov. Cell 2004
50

Genetic variants synthesize to produce paneth cell phenotypes that define subtypes of Crohn's disease.
Kelli L VanDussen, Ta-Chiang Liu, Dalin Li, Fadi Towfic, Nir Modiano, Rachel Winter, Talin Haritunians, Kent D Taylor, Deepti Dhall, Stephan R Targan,[...]. Gastroenterology 2014
108
50

The gut microbiota in IBD.
Chaysavanh Manichanh, Natalia Borruel, Francesc Casellas, Francisco Guarner. Nat Rev Gastroenterol Hepatol 2012
682
50

Pathobionts of the gastrointestinal microbiota and inflammatory disease.
Janet Chow, Haiqing Tang, Sarkis K Mazmanian. Curr Opin Immunol 2011
229
50


The pseudokinase MLKL mediates necroptosis via a molecular switch mechanism.
James M Murphy, Peter E Czabotar, Joanne M Hildebrand, Isabelle S Lucet, Jian-Guo Zhang, Silvia Alvarez-Diaz, Rowena Lewis, Najoua Lalaoui, Donald Metcalf, Andrew I Webb,[...]. Immunity 2013
662
50

Paneth cells constitute the niche for Lgr5 stem cells in intestinal crypts.
Toshiro Sato, Johan H van Es, Hugo J Snippert, Daniel E Stange, Robert G Vries, Maaike van den Born, Nick Barker, Noah F Shroyer, Marc van de Wetering, Hans Clevers. Nature 2011
50

The Impact of NOD2 Variants on Fecal Microbiota in Crohn's Disease and Controls Without Gastrointestinal Disease.
Nicholas A Kennedy, Christopher A Lamb, Susan H Berry, Alan W Walker, John Mansfield, Miles Parkes, Rachel Simpkins, Mark Tremelling, Sarah Nutland, Julian Parkhill,[...]. Inflamm Bowel Dis 2018
26
50

Rewilding Nod2 and Atg16l1 Mutant Mice Uncovers Genetic and Environmental Contributions to Microbial Responses and Immune Cell Composition.
Jian-Da Lin, Joseph C Devlin, Frank Yeung, Caroline McCauley, Jacqueline M Leung, Ying-Han Chen, Alex Cronkite, Christina Hansen, Charlotte Drake-Dunn, Kelly V Ruggles,[...]. Cell Host Microbe 2020
29
50

Mice lacking the tumour necrosis factor receptor 1 are resistant to TNF-mediated toxicity but highly susceptible to infection by Listeria monocytogenes.
J Rothe, W Lesslauer, H Lötscher, Y Lang, P Koebel, F Köntgen, A Althage, R Zinkernagel, M Steinmetz, H Bluethmann. Nature 1993
50


Polymorphisms of the TNF gene and the TNF receptor superfamily member 1B gene are associated with susceptibility to ulcerative colitis and Crohn's disease, respectively.
Hiroko Sashio, Kazuo Tamura, Reiko Ito, Yoshihiro Yamamoto, Hiroko Bamba, Tadashi Kosaka, Shin Fukui, Koji Sawada, Yoshihiro Fukuda, Kazutami Tamura,[...]. Immunogenetics 2002
117
50

Oncostatin M drives intestinal inflammation and predicts response to tumor necrosis factor-neutralizing therapy in patients with inflammatory bowel disease.
Nathaniel R West, Ahmed N Hegazy, Benjamin M J Owens, Samuel J Bullers, Bryan Linggi, Sofia Buonocore, Margherita Coccia, Dieter Görtz, Sébastien This, Krista Stockenhuber,[...]. Nat Med 2017
313
50

Prevalence and Clinical Features of Inflammatory Bowel Diseases Associated With Monogenic Variants, Identified by Whole-Exome Sequencing in 1000 Children at a Single Center.
Eileen Crowley, Neil Warner, Jie Pan, Sam Khalouei, Abdul Elkadri, Karoline Fiedler, Justin Foong, Andrei L Turinsky, Dana Bronte-Tinkew, Shiqi Zhang,[...]. Gastroenterology 2020
33
50

Decreased sensitivity to tumour-necrosis factor but normal T-cell development in TNF receptor-2-deficient mice.
S L Erickson, F J de Sauvage, K Kikly, K Carver-Moore, S Pitts-Meek, N Gillett, K C Sheehan, R D Schreiber, D V Goeddel, M W Moore. Nature 1994
543
50

The Short Chain Fatty Acid Butyrate Imprints an Antimicrobial Program in Macrophages.
Julie Schulthess, Sumeet Pandey, Melania Capitani, Kevin C Rue-Albrecht, Isabelle Arnold, Fanny Franchini, Agnieszka Chomka, Nicholas E Ilott, Daniel G W Johnston, Elisabete Pires,[...]. Immunity 2019
272
50

XIAP restricts TNF- and RIP3-dependent cell death and inflammasome activation.
Monica Yabal, Nicole Müller, Heiko Adler, Nathalie Knies, Christina J Groß, Rune Busk Damgaard, Hirokazu Kanegane, Marc Ringelhan, Thomas Kaufmann, Mathias Heikenwälder,[...]. Cell Rep 2014
161
50

Tumour necrosis factor receptor-associated periodic syndrome (TRAPS): state of the art and future perspectives.
Luca Cantarini, Orso Maria Lucherini, Isabella Muscari, Bruno Frediani, Mauro Galeazzi, Maria Giuseppina Brizi, Gabriele Simonini, Rolando Cimaz. Autoimmun Rev 2012
64
50

Recovery of the Gut Microbiota after Antibiotics Depends on Host Diet, Community Context, and Environmental Reservoirs.
Katharine Michelle Ng, Andrés Aranda-Díaz, Carolina Tropini, Matthew Ryan Frankel, William Van Treuren, Colleen T O'Loughlin, Bryan Douglas Merrill, Feiqiao Brian Yu, Kali M Pruss, Rita Almeida Oliveira,[...]. Cell Host Microbe 2019
63
50

Paneth cell defects in Crohn's disease patients promote dysbiosis.
Ta-Chiang Liu, Bhaskar Gurram, Megan T Baldridge, Richard Head, Vy Lam, Chengwei Luo, Yumei Cao, Pippa Simpson, Michael Hayward, Mary L Holtz,[...]. JCI Insight 2016
51
50

Current and emerging therapeutic targets for IBD.
Markus F Neurath. Nat Rev Gastroenterol Hepatol 2017
255
50

Liver p53 is stabilized upon starvation and required for amino acid catabolism and gluconeogenesis.
Andreas Prokesch, Franziska A Graef, Tobias Madl, Jennifer Kahlhofer, Steffi Heidenreich, Anne Schumann, Elisabeth Moyschewitz, Petra Pristoynik, Astrid Blaschitz, Miriam Knauer,[...]. FASEB J 2017
38
50

Deletion of the Toll-Like Receptor 5 Gene Per Se Does Not Determine the Gut Microbiome Profile That Induces Metabolic Syndrome: Environment Trumps Genotype.
Wei Zhang, Riley Hartmann, Hein Min Tun, Charles O Elson, Ehsan Khafipour, W Timothy Garvey. PLoS One 2016
13
50

Defective ATG16L1-mediated removal of IRE1α drives Crohn's disease-like ileitis.
Markus Tschurtschenthaler, Timon E Adolph, Jonathan W Ashcroft, Lukas Niederreiter, Richa Bharti, Svetlana Saveljeva, Joya Bhattacharyya, Magdalena B Flak, David Q Shih, Gwenny M Fuhler,[...]. J Exp Med 2017
103
50

The ubiquitin ligase XIAP recruits LUBAC for NOD2 signaling in inflammation and innate immunity.
Rune Busk Damgaard, Ueli Nachbur, Monica Yabal, Wendy Wei-Lynn Wong, Berthe Katrine Fiil, Mischa Kastirr, Eva Rieser, James Arthur Rickard, Aleksandra Bankovacki, Christian Peschel,[...]. Mol Cell 2012
256
50

Neonatal selection by Toll-like receptor 5 influences long-term gut microbiota composition.
Marcus Fulde, Felix Sommer, Benoit Chassaing, Kira van Vorst, Aline Dupont, Michael Hensel, Marijana Basic, Robert Klopfleisch, Philip Rosenstiel, André Bleich,[...]. Nature 2018
86
50


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.