A citation-based method for searching scientific literature

Maaike van der Lee, William J Rowell, Roberta Menafra, Henk-Jan Guchelaar, Jesse J Swen, Seyed Yahya Anvar. Pharmacogenomics J 2022
Times Cited: 2







List of co-cited articles
4 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


PharmVar GeneFocus: CYP2D6.
Charity Nofziger, Amy J Turner, Katrin Sangkuhl, Michelle Whirl-Carrillo, José A G Agúndez, John L Black, Henry M Dunnenberger, Gualberto Ruano, Martin A Kennedy, Michael S Phillips,[...]. Clin Pharmacol Ther 2020
97
100

Long-read human genome sequencing and its applications.
Glennis A Logsdon, Mitchell R Vollger, Evan E Eichler. Nat Rev Genet 2020
203
100

Long-Read Single Molecule Real-Time Full Gene Sequencing of Cytochrome P450-2D6.
Wanqiong Qiao, Yao Yang, Robert Sebra, Geetu Mendiratta, Andrea Gaedigk, Robert J Desnick, Stuart A Scott. Hum Mutat 2016
58
100

Massively parallel variant characterization identifies NUDT15 alleles associated with thiopurine toxicity.
Chase C Suiter, Takaya Moriyama, Kenneth A Matreyek, Wentao Yang, Emma Rose Scaletti, Rina Nishii, Wenjian Yang, Keito Hoshitsuki, Minu Singh, Amita Trehan,[...]. Proc Natl Acad Sci U S A 2020
39
100

The Genome Analysis Toolkit: a MapReduce framework for analyzing next-generation DNA sequencing data.
Aaron McKenna, Matthew Hanna, Eric Banks, Andrey Sivachenko, Kristian Cibulskis, Andrew Kernytsky, Kiran Garimella, David Altshuler, Stacey Gabriel, Mark Daly,[...]. Genome Res 2010
50

Integrative analysis of 111 reference human epigenomes.
Anshul Kundaje, Wouter Meuleman, Jason Ernst, Misha Bilenky, Angela Yen, Alireza Heravi-Moussavi, Pouya Kheradpour, Zhizhuo Zhang, Jianrong Wang, Michael J Ziller,[...]. Nature 2015
50

Exome sequencing and analysis of 454,787 UK Biobank participants.
Joshua D Backman, Alexander H Li, Anthony Marcketta, Dylan Sun, Joelle Mbatchou, Michael D Kessler, Christian Benner, Daren Liu, Adam E Locke, Suganthi Balasubramanian,[...]. Nature 2021
75
50

PGG.Han: the Han Chinese genome database and analysis platform.
Yang Gao, Chao Zhang, Liyun Yuan, YunChao Ling, Xiaoji Wang, Chang Liu, Yuwen Pan, Xiaoxi Zhang, Xixian Ma, Yuchen Wang,[...]. Nucleic Acids Res 2020
28
50

Estimating the costs of genomic sequencing in cancer control.
Louisa G Gordon, Nicole M White, Thomas M Elliott, Katia Nones, Anthony G Beckhouse, Astrid J Rodriguez-Acevedo, Penelope M Webb, Xing J Lee, Nicholas Graves, Deborah J Schofield. BMC Health Serv Res 2020
8
50

Genetic variation in the human cytochrome P450 supergene family.
Kohei Fujikura, Magnus Ingelman-Sundberg, Volker M Lauschke. Pharmacogenet Genomics 2015
95
50


Insights into human genetic variation and population history from 929 diverse genomes.
Anders Bergström, Shane A McCarthy, Ruoyun Hui, Mohamed A Almarri, Qasim Ayub, Petr Danecek, Yuan Chen, Sabine Felkel, Pille Hallast, Jack Kamm,[...]. Science 2020
187
50

Regulatory variants: from detection to predicting impact.
Elena Rojano, Pedro Seoane, Juan A G Ranea, James R Perkins. Brief Bioinform 2019
50
50

The Genetics of Transcription Factor DNA Binding Variation.
Bart Deplancke, Daniel Alpern, Vincent Gardeux. Cell 2016
186
50

CADD-Splice-improving genome-wide variant effect prediction using deep learning-derived splice scores.
Philipp Rentzsch, Max Schubach, Jay Shendure, Martin Kircher. Genome Med 2021
110
50

DNA sequencing at 40: past, present and future.
Jay Shendure, Shankar Balasubramanian, George M Church, Walter Gilbert, Jane Rogers, Jeffery A Schloss, Robert H Waterston. Nature 2017
350
50

Stargazer: a software tool for calling star alleles from next-generation sequencing data using CYP2D6 as a model.
Seung-Been Lee, Marsha M Wheeler, Karynne Patterson, Sean McGee, Rachel Dalton, Erica L Woodahl, Andrea Gaedigk, Kenneth E Thummel, Deborah A Nickerson. Genet Med 2019
49
50

Functional Characterization of 34 CYP2A6 Allelic Variants by Assessment of Nicotine C-Oxidation and Coumarin 7-Hydroxylation Activities.
Hiroki Hosono, Masaki Kumondai, Masamitsu Maekawa, Hiroaki Yamaguchi, Nariyasu Mano, Akifumi Oda, Noriyasu Hirasawa, Masahiro Hiratsuka. Drug Metab Dispos 2017
17
50

Million Veteran Program: A mega-biobank to study genetic influences on health and disease.
John Michael Gaziano, John Concato, Mary Brophy, Louis Fiore, Saiju Pyarajan, James Breeling, Stacey Whitbourne, Jennifer Deen, Colleen Shannon, Donald Humphries,[...]. J Clin Epidemiol 2016
387
50


Pharmacogenomics of GPCR Drug Targets.
Alexander S Hauser, Sreenivas Chavali, Ikuo Masuho, Leonie J Jahn, Kirill A Martemyanov, David E Gloriam, M Madan Babu. Cell 2018
289
50

Nanopore sequencing technology, bioinformatics and applications.
Yunhao Wang, Yue Zhao, Audrey Bollas, Yuru Wang, Kin Fai Au. Nat Biotechnol 2021
60
50

Evaluating the utility of personal genomic information.
Morris W Foster, John J Mulvihill, Richard R Sharp. Genet Med 2009
130
50

CYP2C8, CYP2C9, and CYP2C19 Characterization Using Next-Generation Sequencing and Haplotype Analysis: A GeT-RM Collaborative Project.
Andrea Gaedigk, Erin C Boone, Steven E Scherer, Seung-Been Lee, Ibrahim Numanagić, Cenk Sahinalp, Joshua D Smith, Sean McGee, Aparna Radhakrishnan, Xiang Qin,[...]. J Mol Diagn 2022
3
50

Towards population-scale long-read sequencing.
Wouter De Coster, Matthias H Weissensteiner, Fritz J Sedlazeck. Nat Rev Genet 2021
40
50


Whole exome sequencing study identifies novel rare and common Alzheimer's-Associated variants involved in immune response and transcriptional regulation.
Joshua C Bis, Xueqiu Jian, Brian W Kunkle, Yuning Chen, Kara L Hamilton-Nelson, William S Bush, William J Salerno, Daniel Lancour, Yiyi Ma, Alan E Renton,[...]. Mol Psychiatry 2020
126
50

The evaluation of tools used to predict the impact of missense variants is hindered by two types of circularity.
Dominik G Grimm, Chloé-Agathe Azencott, Fabian Aicheler, Udo Gieraths, Daniel G MacArthur, Kaitlin E Samocha, David N Cooper, Peter D Stenson, Mark J Daly, Jordan W Smoller,[...]. Hum Mutat 2015
177
50


The ethnogeographic variability of genetic factors underlying G6PD deficiency.
Maria Koromina, Maria Theodora Pandi, Peter J van der Spek, George P Patrinos, Volker M Lauschke. Pharmacol Res 2021
4
50

Heritability of metoprolol and torsemide pharmacokinetics.
J Matthaei, J Brockmöller, M V Tzvetkov, D Sehrt, C Sachse-Seeboth, J B Hjelmborg, S Möller, U Halekoh, U Hofmann, M Schwab,[...]. Clin Pharmacol Ther 2015
40
50

Genetic associations with clozapine-induced myocarditis in patients with schizophrenia.
Paul Lacaze, Kathlyn J Ronaldson, Eunice J Zhang, Ana Alfirevic, Hardik Shah, Leah Newman, Maya Strahl, Melissa Smith, Chad Bousman, Ben Francis,[...]. Transl Psychiatry 2020
13
50

Biological relevance of computationally predicted pathogenicity of noncoding variants.
Li Liu, Maxwell D Sanderford, Ravi Patel, Pramod Chandrashekar, Greg Gibson, Sudhir Kumar. Nat Commun 2019
24
50

Integrating rare genetic variants into pharmacogenetic drug response predictions.
Magnus Ingelman-Sundberg, Souren Mkrtchian, Yitian Zhou, Volker M Lauschke. Hum Genomics 2018
103
50

Real-time DNA sequencing from single polymerase molecules.
John Eid, Adrian Fehr, Jeremy Gray, Khai Luong, John Lyle, Geoff Otto, Paul Peluso, David Rank, Primo Baybayan, Brad Bettman,[...]. Science 2009
50

Computational Methods for the Pharmacogenetic Interpretation of Next Generation Sequencing Data.
Yitian Zhou, Kohei Fujikura, Souren Mkrtchian, Volker M Lauschke. Front Pharmacol 2018
42
50

A sequencing method based on real-time pyrophosphate.
M Ronaghi, M Uhlén, P Nyrén. Science 1998
916
50

FUN-LDA: A Latent Dirichlet Allocation Model for Predicting Tissue-Specific Functional Effects of Noncoding Variation: Methods and Applications.
Daniel Backenroth, Zihuai He, Krzysztof Kiryluk, Valentina Boeva, Lynn Pethukova, Ekta Khurana, Angela Christiano, Joseph D Buxbaum, Iuliana Ionita-Laza. Am J Hum Genet 2018
44
50

Cost-effectiveness of pharmacogenetic-guided treatment: are we there yet?
M Verbelen, M E Weale, C M Lewis. Pharmacogenomics J 2017
113
50

Requirements for comprehensive pharmacogenetic genotyping platforms.
Volker M Lauschke, Magnus Ingelman-Sundberg. Pharmacogenomics 2016
32
50



Rare variant discovery by deep whole-genome sequencing of 1,070 Japanese individuals.
Masao Nagasaki, Jun Yasuda, Fumiki Katsuoka, Naoki Nariai, Kaname Kojima, Yosuke Kawai, Yumi Yamaguchi-Kabata, Junji Yokozawa, Inaho Danjoh, Sakae Saito,[...]. Nat Commun 2015
269
50

Systematic Computational Identification of Variants That Activate Exonic and Intronic Cryptic Splice Sites.
Melissa Lee, Patrick Roos, Neeraj Sharma, Melis Atalar, Taylor A Evans, Matthew J Pellicore, Emily Davis, Anh-Thu N Lam, Susan E Stanley, Sara E Khalil,[...]. Am J Hum Genet 2017
48
50

A comprehensive evaluation of long read error correction methods.
Haowen Zhang, Chirag Jain, Srinivas Aluru. BMC Genomics 2020
20
50

Determining Cost-Optimal Next-Generation Sequencing Panels for Rare Disease and Pharmacogenomics Testing.
Shanmukh Katragadda, Taryn O Hall, Radhakrishna Bettadapura, Joline C Dalton, Aparna Ganapathy, Pallavi Ghana, Ramesh Hariharan, Anand Janakiraman, Kumar B V S S P Kotha, Ashwini Manjunath,[...]. Clin Chem 2021
1
100


ACMG recommendations for reporting of incidental findings in clinical exome and genome sequencing.
Robert C Green, Jonathan S Berg, Wayne W Grody, Sarah S Kalia, Bruce R Korf, Christa L Martin, Amy L McGuire, Robert L Nussbaum, Julianne M O'Daniel, Kelly E Ormond,[...]. Genet Med 2013
50

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome.
Ben Langmead, Cole Trapnell, Mihai Pop, Steven L Salzberg. Genome Biol 2009
50

Comparative functional analysis of DPYD variants of potential clinical relevance to dihydropyrimidine dehydrogenase activity.
Steven M Offer, Croix C Fossum, Natalie J Wegner, Alexander J Stuflesser, Gabriel L Butterfield, Robert B Diasio. Cancer Res 2014
116
50


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.