A citation-based method for searching scientific literature

Kerem Ayoz, Erman Ayday, A Ercument Cicek. Proc Priv Enhanc Technol 2021
Times Cited: 6







List of co-cited articles
84 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Privacy Risks from Genomic Data-Sharing Beacons.
Suyash S Shringarpure, Carlos D Bustamante. Am J Hum Genet 2015
87
83

Identifying personal genomes by surname inference.
Melissa Gymrek, Amy L McGuire, David Golan, Eran Halperin, Yaniv Erlich. Science 2013
499
83

Routes for breaching and protecting genetic privacy.
Yaniv Erlich, Arvind Narayanan. Nat Rev Genet 2014
158
66

Privacy challenges and research opportunities for genomic data sharing.
Luca Bonomi, Yingxiang Huang, Lucila Ohno-Machado. Nat Genet 2020
31
66

Resolving individuals contributing trace amounts of DNA to highly complex mixtures using high-density SNP genotyping microarrays.
Nils Homer, Szabolcs Szelinger, Margot Redman, David Duggan, Waibhav Tembe, Jill Muehling, John V Pearson, Dietrich A Stephan, Stanley F Nelson, David W Craig. PLoS Genet 2008
471
66

Identity inference of genomic data using long-range familial searches.
Yaniv Erlich, Tal Shor, Itsik Pe'er, Shai Carmi. Science 2018
107
66



Genomic privacy and limits of individual detection in a pool.
Sriram Sankararaman, Guillaume Obozinski, Michael I Jordan, Eran Halperin. Nat Genet 2009
74
66

An Inference Attack on Genomic Data Using Kinship, Complex Correlations, and Phenotype Information.
Iman Deznabi, Mohammad Mobayen, Nazanin Jafari, Oznur Tastan, Erman Ayday. IEEE/ACM Trans Comput Biol Bioinform 2018
12
66

On sharing quantitative trait GWAS results in an era of multiple-omics data and the limits of genomic privacy.
Hae Kyung Im, Eric R Gamazon, Dan L Nicolae, Nancy J Cox. Am J Hum Genet 2012
55
50

The "All of Us" Research Program.
Joshua C Denny, Joni L Rutter, David B Goldstein, Anthony Philippakis, Jordan W Smoller, Gwynne Jenkins, Eric Dishman. N Engl J Med 2019
374
50

Research ethics. The complexities of genomic identifiability.
Laura L Rodriguez, Lisa D Brooks, Judith H Greenberg, Eric D Green. Science 2013
73
50

Data Sanitization to Reduce Private Information Leakage from Functional Genomics.
Gamze Gürsoy, Prashant Emani, Charlotte M Brannon, Otto A Jolanki, Arif Harmanci, J Seth Strattan, J Michael Cherry, Andrew D Miranker, Mark Gerstein. Cell 2020
13
50

Sketching algorithms for genomic data analysis and querying in a secure enclave.
Can Kockan, Kaiyuan Zhu, Natnatee Dokmai, Nikolai Karpov, M Oguzhan Kulekci, David P Woodruff, S Cenk Sahinalp. Nat Methods 2020
11
50

Realizing the potential of blockchain technologies in genomics.
Halil Ibrahim Ozercan, Atalay Mert Ileri, Erman Ayday, Can Alkan. Genome Res 2018
32
50

Privacy-Preserving Data Sharing for Genome-Wide Association Studies.
Caroline Uhlerop, Aleksandra Slavković, Stephen E Fienberg. J Priv Confid 2013
25
50

Privacy Policy and Technology in Biomedical Data Science.
April Moreno Arellano, Wenrui Dai, Shuang Wang, Xiaoqian Jiang, Lucila Ohno-Machado. Annu Rev Biomed Data Sci 2018
15
50


Secure genome-wide association analysis using multiparty computation.
Hyunghoon Cho, David J Wu, Bonnie Berger. Nat Biotechnol 2018
44
50

Federated discovery and sharing of genomic data using Beacons.
Marc Fiume, Miroslav Cupak, Stephen Keenan, Jordi Rambla, Sabela de la Torre, Stephanie O M Dyke, Anthony J Brookes, Knox Carey, David Lloyd, Peter Goodhand,[...]. Nat Biotechnol 2019
39
50

Identification of individuals by trait prediction using whole-genome sequencing data.
Christoph Lippert, Riccardo Sabatini, M Cyrus Maher, Eun Yong Kang, Seunghak Lee, Okan Arikan, Alena Harley, Axel Bernal, Peter Garst, Victor Lavrenko,[...]. Proc Natl Acad Sci U S A 2017
61
50

Statistical Detection of Relatives Typed with Disjoint Forensic and Biomedical Loci.
Jaehee Kim, Michael D Edge, Bridget F B Algee-Hewitt, Jun Z Li, Noah A Rosenberg. Cell 2018
18
50

Privacy in the Genomic Era.
Muhammad Naveed, Erman Ayday, Ellen W Clayton, Jacques Fellay, Carl A Gunter, Jean-Pierre Hubaux, Bradley A Malin, Xiaofeng Wang. ACM Comput Surv 2015
78
50

Linkage disequilibrium matches forensic genetic records to disjoint genomic marker sets.
Michael D Edge, Bridget F B Algee-Hewitt, Trevor J Pemberton, Jun Z Li, Noah A Rosenberg. Proc Natl Acad Sci U S A 2017
24
50


Methylation array data can simultaneously identify individuals and convey protected health information: an unrecognized ethical concern.
Robert A Philibert, Nicolas Terry, Cheryl Erwin, Winter J Philibert, Steven Rh Beach, Gene H Brody. Clin Epigenetics 2014
25
33

Fair compute loads enabled by blockchain: sharing models by alternating client and server roles.
Tsung-Ting Kuo, Rodney A Gabriel, Lucila Ohno-Machado. J Am Med Inform Assoc 2019
19
33

The Cancer Genome Atlas Pan-Cancer analysis project.
John N Weinstein, Eric A Collisson, Gordon B Mills, Kenna R Mills Shaw, Brad A Ozenberger, Kyle Ellrott, Ilya Shmulevich, Chris Sander, Joshua M Stuart. Nat Genet 2013
33

FANCY: fast estimation of privacy risk in functional genomics data.
Gamze Gürsoy, Charlotte M Brannon, Fabio C P Navarro, Mark Gerstein. Bioinformatics 2021
2
100

A privacy-preserving solution for compressed storage and selective retrieval of genomic data.
Zhicong Huang, Erman Ayday, Huang Lin, Raeka S Aiyar, Adam Molyneaux, Zhenyu Xu, Jacques Fellay, Lars M Steinmetz, Jean-Pierre Hubaux. Genome Res 2016
14
33

Recovering genotypes and phenotypes using allele-specific genes.
Gamze Gürsoy, Nancy Lu, Sarah Wagner, Mark Gerstein. Genome Biol 2021
2
100

Identifying genetic relatives without compromising privacy.
Dan He, Nicholas A Furlotte, Farhad Hormozdiari, Jong Wha J Joo, Akshay Wadia, Rafail Ostrovsky, Amit Sahai, Eleazar Eskin. Genome Res 2014
20
33

Next generation sequencing in functional genomics.
Thomas Werner. Brief Bioinform 2010
65
33



Rapid genotype imputation from sequence with reference panels.
Robert W Davies, Marek Kucka, Dingwen Su, Sinan Shi, Maeve Flanagan, Christopher M Cunniff, Yingguang Frank Chan, Simon Myers. Nat Genet 2021
14
33


Leveraging blockchain for immutable logging and querying across multiple sites.
Mustafa Safa Ozdayi, Murat Kantarcioglu, Bradley Malin. BMC Med Genomics 2020
6
33


Decentralized genomics audit logging via permissioned blockchain ledgering.
Nicholas D Pattengale, Corey M Hudson. BMC Med Genomics 2020
6
33

A global reference for human genetic variation.
Adam Auton, Lisa D Brooks, Richard M Durbin, Erik P Garrison, Hyun Min Kang, Jan O Korbel, Jonathan L Marchini, Shane McCarthy, Gil A McVean, Gonçalo R Abecasis. Nature 2015
33

Addressing Beacon re-identification attacks: quantification and mitigation of privacy risks.
Jean Louis Raisaro, Florian Tramèr, Zhanglong Ji, Diyue Bu, Yongan Zhao, Knox Carey, David Lloyd, Heidi Sofia, Dixie Baker, Paul Flicek,[...]. J Am Med Inform Assoc 2017
39
33


Using blockchain to log genome dataset access: efficient storage and query.
Gamze Gürsoy, Robert Bjornson, Molly E Green, Mark Gerstein. BMC Med Genomics 2020
9
33

NCBI's Database of Genotypes and Phenotypes: dbGaP.
Kimberly A Tryka, Luning Hao, Anne Sturcke, Yumi Jin, Zhen Y Wang, Lora Ziyabari, Moira Lee, Natalia Popova, Nataliya Sharopova, Masato Kimura,[...]. Nucleic Acids Res 2014
269
33

Realizing private and practical pharmacological collaboration.
Brian Hie, Hyunghoon Cho, Bonnie Berger. Science 2018
23
33

Data use under the NIH GWAS data sharing policy and future directions.
Dina N Paltoo, Laura Lyman Rodriguez, Michael Feolo, Elizabeth Gillanders, Erin M Ramos, Joni L Rutter, Stephen Sherry, Vivian Ota Wang, Alice Bailey, Rebecca Baker,[...]. Nat Genet 2014
60
33

Three decades of genetic privacy: a metaphoric journey.
Bartha Maria Knoppers, Michael J S Beauvais. Hum Mol Genet 2021
2
100

Next generation sequencing based approaches to epigenomics.
Martin Hirst, Marco A Marra. Brief Funct Genomics 2010
38
33


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.