A citation-based method for searching scientific literature

Yaping Liu. Br J Cancer 2022
Times Cited: 1







List of co-cited articles
articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Patient-derived organoids as a predictive biomarker for treatment response in cancer patients.
G Emerens Wensink, Sjoerd G Elias, Jasper Mullenders, Miriam Koopman, Sylvia F Boj, Onno W Kranenburg, Jeanine M L Roodhart. NPJ Precis Oncol 2021
52
100

Tazemetostat for patients with relapsed or refractory follicular lymphoma: an open-label, single-arm, multicentre, phase 2 trial.
Franck Morschhauser, Hervé Tilly, Aristeidis Chaidos, Pamela McKay, Tycel Phillips, Sarit Assouline, Connie Lee Batlevi, Phillip Campbell, Vincent Ribrag, Gandhi Laurent Damaj,[...]. Lancet Oncol 2020
142
100

Detection and characterization of lung cancer using cell-free DNA fragmentomes.
Dimitrios Mathios, Jakob Sidenius Johansen, Stephen Cristiano, Jamie E Medina, Jillian Phallen, Klaus R Larsen, Daniel C Bruhm, Noushin Niknafs, Leonardo Ferreira, Vilmos Adleff,[...]. Nat Commun 2021
43
100

Predicting Molecular Phenotypes from Histopathology Images: A Transcriptome-Wide Expression-Morphology Analysis in Breast Cancer.
Yinxi Wang, Kimmo Kartasalo, Philippe Weitz, Balázs Ács, Masi Valkonen, Christer Larsson, Pekka Ruusuvuori, Johan Hartman, Mattias Rantalainen. Cancer Res 2021
6
100

Real-world data from a molecular tumor board demonstrates improved outcomes with a precision N-of-One strategy.
Shumei Kato, Ki Hwan Kim, Hyo Jeong Lim, Amelie Boichard, Mina Nikanjam, Elizabeth Weihe, Dennis J Kuo, Ramez N Eskander, Aaron Goodman, Natalie Galanina,[...]. Nat Commun 2020
92
100


Inter- and intra-tumor heterogeneity of metastatic prostate cancer determined by digital spatial gene expression profiling.
Lauren Brady, Michelle Kriner, Ilsa Coleman, Colm Morrissey, Martine Roudier, Lawrence D True, Roman Gulati, Stephen R Plymate, Zoey Zhou, Brian Birditt,[...]. Nat Commun 2021
61
100

Higher-Order Inter-chromosomal Hubs Shape 3D Genome Organization in the Nucleus.
Sofia A Quinodoz, Noah Ollikainen, Barbara Tabak, Ali Palla, Jan Marten Schmidt, Elizabeth Detmar, Mason M Lai, Alexander A Shishkin, Prashant Bhat, Yodai Takei,[...]. Cell 2018
376
100

High-throughput single-cell ChIP-seq identifies heterogeneity of chromatin states in breast cancer.
Kevin Grosselin, Adeline Durand, Justine Marsolier, Adeline Poitou, Elisabetta Marangoni, Fariba Nemati, Ahmed Dahmani, Sonia Lameiras, Fabien Reyal, Olivia Frenoy,[...]. Nat Genet 2019
200
100

NeoPalAna: Neoadjuvant Palbociclib, a Cyclin-Dependent Kinase 4/6 Inhibitor, and Anastrozole for Clinical Stage 2 or 3 Estrogen Receptor-Positive Breast Cancer.
Cynthia X Ma, Feng Gao, Jingqin Luo, Donald W Northfelt, Matthew Goetz, Andres Forero, Jeremy Hoog, Michael Naughton, Foluso Ademuyiwa, Rama Suresh,[...]. Clin Cancer Res 2017
182
100

Towards personalized medicine: chemosensitivity assays of patient lung cancer cell spheroids in a perfused microfluidic platform.
Janine Ruppen, Franziska D Wildhaber, Christoph Strub, Sean R R Hall, Ralph A Schmid, Thomas Geiser, Olivier T Guenat. Lab Chip 2015
63
100

Models that combine transcriptomic with spatial protein information exceed the predictive value for either single modality.
Ioannis A Vathiotis, Zhi Yang, Jason Reeves, Maria Toki, Thazin Nwe Aung, Pok Fai Wong, Harriet Kluger, Konstantinos N Syrigos, Sarah Warren, David L Rimm. NPJ Precis Oncol 2021
8
100

Ultra-fast, label-free isolation of circulating tumor cells from blood using spiral microfluidics.
Majid Ebrahimi Warkiani, Bee Luan Khoo, Lidan Wu, Andy Kah Ping Tay, Ali Asgar S Bhagat, Jongyoon Han, Chwee Teck Lim. Nat Protoc 2016
278
100

Genomic Analysis of Circulating Tumor DNA in 3,334 Patients with Advanced Prostate Cancer Identifies Targetable BRCA Alterations and AR Resistance Mechanisms.
Hanna Tukachinsky, Russell W Madison, Jon H Chung, Ole V Gjoerup, Eric A Severson, Lucas Dennis, Bernard J Fendler, Samantha Morley, Lei Zhong, Ryon P Graf,[...]. Clin Cancer Res 2021
42
100

Integrated digital error suppression for improved detection of circulating tumor DNA.
Aaron M Newman, Alexander F Lovejoy, Daniel M Klass, David M Kurtz, Jacob J Chabon, Florian Scherer, Henning Stehr, Chih Long Liu, Scott V Bratman, Carmen Say,[...]. Nat Biotechnol 2016
591
100

Dissecting spatial heterogeneity and the immune-evasion mechanism of CTCs by single-cell RNA-seq in hepatocellular carcinoma.
Yun-Fan Sun, Liang Wu, Shi-Ping Liu, Miao-Miao Jiang, Bo Hu, Kai-Qian Zhou, Wei Guo, Yang Xu, Yu Zhong, Xiao-Rui Zhou,[...]. Nat Commun 2021
29
100

High-throughput single-cell activity-based screening and sequencing of antibodies using droplet microfluidics.
Annabelle Gérard, Adam Woolfe, Guillaume Mottet, Marcel Reichen, Carlos Castrillon, Vera Menrath, Sami Ellouze, Adeline Poitou, Raphaël Doineau, Luis Briseno-Roa,[...]. Nat Biotechnol 2020
69
100

Circulating tumor cells predict survival benefit from treatment in metastatic castration-resistant prostate cancer.
Johann S de Bono, Howard I Scher, R Bruce Montgomery, Christopher Parker, M Craig Miller, Henk Tissing, Gerald V Doyle, Leon W W M Terstappen, Kenneth J Pienta, Derek Raghavan. Clin Cancer Res 2008
100

Mass spectrometry analysis of circulating breast cancer cells from a Xenograft mouse model.
Cinzia Donato, Katarzyna Buczak, Alexander Schmidt, Nicola Aceto. STAR Protoc 2021
3
100

Nuclear organization of active and inactive chromatin domains uncovered by chromosome conformation capture-on-chip (4C).
Marieke Simonis, Petra Klous, Erik Splinter, Yuri Moshkin, Rob Willemsen, Elzo de Wit, Bas van Steensel, Wouter de Laat. Nat Genet 2006
916
100

Hypoxia Triggers the Intravasation of Clustered Circulating Tumor Cells.
Cinzia Donato, Leo Kunz, Francesc Castro-Giner, Aino Paasinen-Sohns, Karin Strittmatter, Barbara Maria Szczerba, Ramona Scherrer, Nunzia Di Maggio, Wolf Heusermann, Oliver Biehlmaier,[...]. Cell Rep 2020
56
100

Dynamics and Spatial Genomics of the Nascent Transcriptome by Intron seqFISH.
Sheel Shah, Yodai Takei, Wen Zhou, Eric Lubeck, Jina Yun, Chee-Huat Linus Eng, Noushin Koulena, Christopher Cronin, Christoph Karp, Eric J Liaw,[...]. Cell 2018
128
100


Reprogramming of bivalent chromatin states in NRAS mutant melanoma suggests PRC2 inhibition as a therapeutic strategy.
Christopher J Terranova, Ming Tang, Mayinuer Maitituoheti, Ayush T Raman, Archit K Ghosh, Jonathan Schulz, Samir B Amin, Elias Orouji, Katarzyna Tomczak, Sharmistha Sarkar,[...]. Cell Rep 2021
6
100

A single-cell and spatially resolved atlas of human breast cancers.
Sunny Z Wu, Ghamdan Al-Eryani, Daniel Lee Roden, Simon Junankar, Kate Harvey, Alma Andersson, Aatish Thennavan, Chenfei Wang, James R Torpy, Nenad Bartonicek,[...]. Nat Genet 2021
84
100

Single-cell nuclear architecture across cell types in the mouse brain.
Yodai Takei, Shiwei Zheng, Jina Yun, Sheel Shah, Nico Pierson, Jonathan White, Simone Schindler, Carsten H Tischbirek, Guo-Cheng Yuan, Long Cai. Science 2021
21
100

High-Spatial-Resolution Multi-Omics Sequencing via Deterministic Barcoding in Tissue.
Yang Liu, Mingyu Yang, Yanxiang Deng, Graham Su, Archibald Enninful, Cindy C Guo, Toma Tebaldi, Di Zhang, Dongjoo Kim, Zhiliang Bai,[...]. Cell 2020
146
100

Live single cell mass spectrometry reveals cancer-specific metabolic profiles of circulating tumor cells.
Yasmine Abouleila, Kaoru Onidani, Ahmed Ali, Hirokazu Shoji, Takayuki Kawai, Chwee Teck Lim, Vipin Kumar, Shinobu Okaya, Ken Kato, Eiso Hiyama,[...]. Cancer Sci 2019
46
100

Multimodal liquid biopsy for early monitoring and outcome prediction of chemotherapy in metastatic breast cancer.
Amanda Bortolini Silveira, François-Clément Bidard, Marie-Laure Tanguy, Elodie Girard, Olivier Trédan, Coraline Dubot, William Jacot, Anthony Goncalves, Marc Debled, Christelle Levy,[...]. NPJ Breast Cancer 2021
13
100

Targeting epigenetic regulatory machinery to overcome cancer therapy resistance.
Lei Guo, Yi-Tsang Lee, Yubin Zhou, Yun Huang. Semin Cancer Biol 2022
10
100

Multiplex chromatin interactions with single-molecule precision.
Meizhen Zheng, Simon Zhongyuan Tian, Daniel Capurso, Minji Kim, Rahul Maurya, Byoungkoo Lee, Emaly Piecuch, Liang Gong, Jacqueline Jufen Zhu, Zhihui Li,[...]. Nature 2019
103
100

Surface Proteomics Reveals CD72 as a Target for In Vitro-Evolved Nanobody-Based CAR-T Cells in KMT2A/MLL1-Rearranged B-ALL.
Matthew A Nix, Kamal Mandal, Huimin Geng, Neha Paranjape, Yu-Hsiu T Lin, Jose M Rivera, Makeba Marcoulis, Kristie L White, Jeffrey D Whitman, Sagar P Bapat,[...]. Cancer Discov 2021
10
100

Spatial-CUT&Tag: Spatially resolved chromatin modification profiling at the cellular level.
Yanxiang Deng, Marek Bartosovic, Petra Kukanja, Di Zhang, Yang Liu, Graham Su, Archibald Enninful, Zhiliang Bai, Gonçalo Castelo-Branco, Rong Fan. Science 2022
25
100

Integrating microarray-based spatial transcriptomics and single-cell RNA-seq reveals tissue architecture in pancreatic ductal adenocarcinomas.
Reuben Moncada, Dalia Barkley, Florian Wagner, Marta Chiodin, Joseph C Devlin, Maayan Baron, Cristina H Hajdu, Diane M Simeone, Itai Yanai. Nat Biotechnol 2020
235
100

Spatial transcriptomic analysis of cryosectioned tissue samples with Geo-seq.
Jun Chen, Shengbao Suo, Patrick Pl Tam, Jing-Dong J Han, Guangdun Peng, Naihe Jing. Nat Protoc 2017
124
100

An N-Cadherin 2 expressing epithelial cell subpopulation predicts response to surgery, chemotherapy and immunotherapy in bladder cancer.
Kenneth H Gouin, Nathan Ing, Jasmine T Plummer, Charles J Rosser, Bassem Ben Cheikh, Catherine Oh, Stephanie S Chen, Keith Syson Chan, Hideki Furuya, Warren G Tourtellotte,[...]. Nat Commun 2021
19
100

Mapping long-range promoter contacts in human cells with high-resolution capture Hi-C.
Borbala Mifsud, Filipe Tavares-Cadete, Alice N Young, Robert Sugar, Stefan Schoenfelder, Lauren Ferreira, Steven W Wingett, Simon Andrews, William Grey, Philip A Ewels,[...]. Nat Genet 2015
565
100

Organoid Models of Tumor Immunology.
Kanako Yuki, Ning Cheng, Michitaka Nakano, Calvin J Kuo. Trends Immunol 2020
107
100

Targeting the cancer epigenome for therapy.
Peter A Jones, Jean-Pierre J Issa, Stephen Baylin. Nat Rev Genet 2016
638
100

Interactions between cancer cells and immune cells drive transitions to mesenchymal-like states in glioblastoma.
Toshiro Hara, Rony Chanoch-Myers, Nathan D Mathewson, Chad Myskiw, Lyla Atta, Lillian Bussema, Stephen W Eichhorn, Alissa C Greenwald, Gabriela S Kinker, Christopher Rodman,[...]. Cancer Cell 2021
92
100

EASI-FISH for thick tissue defines lateral hypothalamus spatio-molecular organization.
Yuhan Wang, Mark Eddison, Greg Fleishman, Martin Weigert, Shengjin Xu, Tim Wang, Konrad Rokicki, Cristian Goina, Fredrick E Henry, Andrew L Lemire,[...]. Cell 2021
15
100

Automated CUT&Tag profiling of chromatin heterogeneity in mixed-lineage leukemia.
Derek H Janssens, Michael P Meers, Steven J Wu, Ekaterina Babaeva, Soheil Meshinchi, Jay F Sarthy, Kami Ahmad, Steven Henikoff. Nat Genet 2021
12
100

Simultaneous visualization of DNA loci in single cells by combinatorial multi-color iFISH.
Ana Mota, Maud Schweitzer, Erik Wernersson, Nicola Crosetto, Magda Bienko. Sci Data 2022
1
100



Analysis of the Human Kinome and Phosphatome by Mass Cytometry Reveals Overexpression-Induced Effects on Cancer-Related Signaling.
Xiao-Kang Lun, Damian Szklarczyk, Attila Gábor, Nadine Dobberstein, Vito Riccardo Tomaso Zanotelli, Julio Saez-Rodriguez, Christian von Mering, Bernd Bodenmiller. Mol Cell 2019
17
100

Cell-free DNA captures tumor heterogeneity and driver alterations in rapid autopsies with pre-treated metastatic cancer.
Bernard Pereira, Christopher T Chen, Lipika Goyal, Charlotte Walmsley, Christopher J Pinto, Islam Baiev, Read Allen, Laura Henderson, Supriya Saha, Stephanie Reyes,[...]. Nat Commun 2021
12
100

Uncovering an Organ's Molecular Architecture at Single-Cell Resolution by Spatially Resolved Transcriptomics.
Jie Liao, Xiaoyan Lu, Xin Shao, Ling Zhu, Xiaohui Fan. Trends Biotechnol 2021
62
100

Recent advances and discoveries in the mechanisms and functions of CAR T cells.
Rebecca C Larson, Marcela V Maus. Nat Rev Cancer 2021
171
100

Spatially resolved transcriptomics and its applications in cancer.
Silas Maniatis, Joana Petrescu, Hemali Phatnani. Curr Opin Genet Dev 2021
28
100


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.