A citation-based method for searching scientific literature

Heleen M van 't Spijker, Emily E Stackpole, Sandra Almeida, Olga Katsara, Botao Liu, Kuang Shen, Robert J Schneider, Fen-Biao Gao, Joel D Richter. RNA 2022
Times Cited: 1







List of co-cited articles
articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Determination of the relative precision of atoms in a macromolecular structure.
G Zhou, J Wang, E Blanc, M S Chapman. Acta Crystallogr D Biol Crystallogr 1998
13
100


C9orf72-mediated ALS and FTD: multiple pathways to disease.
Rubika Balendra, Adrian M Isaacs. Nat Rev Neurol 2018
252
100

Poly(GR) impairs protein translation and stress granule dynamics in C9orf72-associated frontotemporal dementia and amyotrophic lateral sclerosis.
Yong-Jie Zhang, Tania F Gendron, Mark T W Ebbert, Aliesha D O'Raw, Mei Yue, Karen Jansen-West, Xu Zhang, Mercedes Prudencio, Jeannie Chew, Casey N Cook,[...]. Nat Med 2018
148
100

UCSF Chimera--a visualization system for exploratory research and analysis.
Eric F Pettersen, Thomas D Goddard, Conrad C Huang, Gregory S Couch, Daniel M Greenblatt, Elaine C Meng, Thomas E Ferrin. J Comput Chem 2004
100

Proteomics and C9orf72 neuropathology identify ribosomes as poly-GR/PR interactors driving toxicity.
Hannelore Hartmann, Daniel Hornburg, Mareike Czuppa, Jakob Bader, Meike Michaelsen, Daniel Farny, Thomas Arzberger, Matthias Mann, Felix Meissner, Dieter Edbauer. Life Sci Alliance 2018
50
100

Structural basis for the inhibition of the eukaryotic ribosome.
Nicolas Garreau de Loubresse, Irina Prokhorova, Wolf Holtkamp, Marina V Rodnina, Gulnara Yusupova, Marat Yusupov. Nature 2014
276
100

Solution structure of the E. coli 70S ribosome at 11.5 A resolution.
I S Gabashvili, R K Agrawal, C M Spahn, R A Grassucci, D I Svergun, J Frank, P Penczek. Cell 2000
312
100

Chimeric Peptide Species Contribute to Divergent Dipeptide Repeat Pathology in c9ALS/FTD and SCA36.
Zachary T McEachin, Tania F Gendron, Nisha Raj, María García-Murias, Anwesha Banerjee, Ryan H Purcell, Patricia J Ward, Tiffany W Todd, Megan E Merritt-Garza, Karen Jansen-West,[...]. Neuron 2020
24
100

Elevated methylation levels, reduced expression levels, and frequent contractions in a clinical cohort of C9orf72 expansion carriers.
Jazmyne L Jackson, NiCole A Finch, Matthew C Baker, Jennifer M Kachergus, Mariely DeJesus-Hernandez, Kimberly Pereira, Elizabeth Christopher, Mercedes Prudencio, Michael G Heckman, E Aubrey Thompson,[...]. Mol Neurodegener 2020
20
100

Simulated-annealing real-space refinement as a tool in model building.
Andrei Korostelev, Richard Bertram, Michael S Chapman. Acta Crystallogr D Biol Crystallogr 2002
45
100

The Overlapping Genetics of Amyotrophic Lateral Sclerosis and Frontotemporal Dementia.
Yevgeniya A Abramzon, Pietro Fratta, Bryan J Traynor, Ruth Chia. Front Neurosci 2020
78
100

The Phenix software for automated determination of macromolecular structures.
Paul D Adams, Pavel V Afonine, Gábor Bunkóczi, Vincent B Chen, Nathaniel Echols, Jeffrey J Headd, Li-Wei Hung, Swati Jain, Gary J Kapral, Ralf W Grosse Kunstleve,[...]. Methods 2011
561
100

Likelihood-based classification of cryo-EM images using FREALIGN.
Dmitry Lyumkis, Axel F Brilot, Douglas L Theobald, Nikolaus Grigorieff. J Struct Biol 2013
167
100

FTD/ALS-associated poly(GR) protein impairs the Notch pathway and is recruited by poly(GA) into cytoplasmic inclusions.
Dejun Yang, Abbas Abdallah, Zhaodong Li, Yubing Lu, Sandra Almeida, Fen-Biao Gao. Acta Neuropathol 2015
93
100

Computer visualization of three-dimensional image data using IMOD.
J R Kremer, D N Mastronarde, J R McIntosh. J Struct Biol 1996
100

Structures of the Escherichia coli ribosome with antibiotics bound near the peptidyl transferase center explain spectra of drug action.
Jack A Dunkle, Liqun Xiong, Alexander S Mankin, Jamie H D Cate. Proc Natl Acad Sci U S A 2010
280
100

Heterochromatin anomalies and double-stranded RNA accumulation underlie C9orf72 poly(PR) toxicity.
Yong-Jie Zhang, Lin Guo, Patrick K Gonzales, Tania F Gendron, Yanwei Wu, Karen Jansen-West, Aliesha D O'Raw, Sarah R Pickles, Mercedes Prudencio, Yari Carlomagno,[...]. Science 2019
100
100

Coot: model-building tools for molecular graphics.
Paul Emsley, Kevin Cowtan. Acta Crystallogr D Biol Crystallogr 2004
100

Trogocytosis of peptide-MHC class II complexes from dendritic cells confers antigen-presenting ability on basophils.
Kensuke Miyake, Nozomu Shiozawa, Toshihisa Nagao, Soichiro Yoshikawa, Yoshinori Yamanishi, Hajime Karasuyama. Proc Natl Acad Sci U S A 2017
77
100

C9orf72 is required for proper macrophage and microglial function in mice.
J G O'Rourke, L Bogdanik, A Yáñez, D Lall, A J Wolf, A K M G Muhammad, R Ho, S Carmona, J P Vit, J Zarrow,[...]. Science 2016
319
100



Phenotype difference between ALS patients with expanded repeats in C9ORF72 and patients with mutations in other ALS-related genes.
Stéphanie Millecamps, Séverine Boillée, Isabelle Le Ber, Danielle Seilhean, Elisa Teyssou, Marine Giraudeau, Carine Moigneu, Nadia Vandenberghe, Véronique Danel-Brunaud, Philippe Corcia,[...]. J Med Genet 2012
127
100

Ensemble cryo-EM elucidates the mechanism of translation fidelity.
Anna B Loveland, Gabriel Demo, Nikolaus Grigorieff, Andrei A Korostelev. Nature 2017
97
100

Poly-dipeptides encoded by the C9orf72 repeats bind nucleoli, impede RNA biogenesis, and kill cells.
Ilmin Kwon, Siheng Xiang, Masato Kato, Leeju Wu, Pano Theodoropoulos, Tao Wang, Jiwoong Kim, Jonghyun Yun, Yang Xie, Steven L McKnight. Science 2014
394
100

Conformational Control of Translation Termination on the 70S Ribosome.
Egor Svidritskiy, Andrei A Korostelev. Structure 2018
17
100

Nucleolar stress and impaired stress granule formation contribute to C9orf72 RAN translation-induced cytotoxicity.
Zhouteng Tao, Hongfeng Wang, Qin Xia, Ke Li, Kai Li, Xiaogang Jiang, Guoqiang Xu, Guanghui Wang, Zheng Ying. Hum Mol Genet 2015
159
100

NanoLuc: A Small Luciferase Is Brightening Up the Field of Bioluminescence.
Christopher G England, Emily B Ehlerding, Weibo Cai. Bioconjug Chem 2016
185
100

C9orf72-generated poly-GR and poly-PR do not directly interfere with nucleocytoplasmic transport.
Joni Vanneste, Thomas Vercruysse, Steven Boeynaems, Adria Sicart, Philip Van Damme, Dirk Daelemans, Ludo Van Den Bosch. Sci Rep 2019
29
100

Toxic PR Poly-Dipeptides Encoded by the C9orf72 Repeat Expansion Target LC Domain Polymers.
Yi Lin, Eiichiro Mori, Masato Kato, Siheng Xiang, Leeju Wu, Ilmin Kwon, Steven L McKnight. Cell 2016
218
100

Cryo-EM of elongating ribosome with EF-Tu•GTP elucidates tRNA proofreading.
Anna B Loveland, Gabriel Demo, Andrei A Korostelev. Nature 2020
33
100

Real-space refinement in PHENIX for cryo-EM and crystallography.
Pavel V Afonine, Billy K Poon, Randy J Read, Oleg V Sobolev, Thomas C Terwilliger, Alexandre Urzhumtsev, Paul D Adams. Acta Crystallogr D Struct Biol 2018
809
100

Eukaryotic protein synthesis inhibitors identified by comparison of cytotoxicity profiles.
Jenny Chan, Shakila N Khan, Isabelle Harvey, William Merrick, Jerry Pelletier. RNA 2004
48
100

Poly(GR) in C9ORF72-Related ALS/FTD Compromises Mitochondrial Function and Increases Oxidative Stress and DNA Damage in iPSC-Derived Motor Neurons.
Rodrigo Lopez-Gonzalez, Yubing Lu, Tania F Gendron, Anna Karydas, Helene Tran, Dejun Yang, Leonard Petrucelli, Bruce L Miller, Sandra Almeida, Fen-Biao Gao. Neuron 2016
210
100

Converging mechanisms in ALS and FTD: disrupted RNA and protein homeostasis.
Shuo-Chien Ling, Magdalini Polymenidou, Don W Cleveland. Neuron 2013
985
100

Bacterial protein synthesis: the effects of antibiotics.
E Cundliffe, K McQuillen. J Mol Biol 1967
147
100

Expanded GGGGCC hexanucleotide repeat in noncoding region of C9ORF72 causes chromosome 9p-linked FTD and ALS.
Mariely DeJesus-Hernandez, Ian R Mackenzie, Bradley F Boeve, Adam L Boxer, Matt Baker, Nicola J Rutherford, Alexandra M Nicholson, NiCole A Finch, Heather Flynn, Jennifer Adamson,[...]. Neuron 2011
100

C9ORF72 hexanucleotide expansions of 20-22 repeats are associated with frontotemporal deterioration.
Estrella Gómez-Tortosa, Jesús Gallego, Rosa Guerrero-López, Alberto Marcos, Eulogio Gil-Neciga, María José Sainz, Asunción Díaz, Emilio Franco-Macías, María José Trujillo-Tiebas, Carmen Ayuso,[...]. Neurology 2013
72
100

Large C9orf72 repeat expansions are seen in Chinese patients with sporadic amyotrophic lateral sclerosis.
Yongping Chen, Ziqiang Lin, Xueping Chen, Bei Cao, Qianqian Wei, Ruwei Ou, Bi Zhao, Wei Song, Ying Wu, Hui-Fang Shang. Neurobiol Aging 2016
36
100

An antimicrobial peptide that inhibits translation by trapping release factors on the ribosome.
Tanja Florin, Cristina Maracci, Michael Graf, Prajwal Karki, Dorota Klepacki, Otto Berninghausen, Roland Beckmann, Nora Vázquez-Laslop, Daniel N Wilson, Marina V Rodnina,[...]. Nat Struct Mol Biol 2017
67
100

Antisense proline-arginine RAN dipeptides linked to C9ORF72-ALS/FTD form toxic nuclear aggregates that initiate in vitro and in vivo neuronal death.
Xinmei Wen, Wenzhi Tan, Thomas Westergard, Karthik Krishnamurthy, Shashirekha S Markandaiah, Yingxiao Shi, Shaoyu Lin, Neil A Shneider, John Monaghan, Udai B Pandey,[...]. Neuron 2014
318
100

Multiplex analyte assays to characterize different dementias: brain inflammatory cytokines in poststroke and other dementias.
Aiqing Chen, Arthur E Oakley, Maria Monteiro, Katri Tuomela, Louise M Allan, Elizabeta B Mukaetova-Ladinska, John T O'Brien, Raj N Kalaria. Neurobiol Aging 2016
41
100

Structures of proline-rich peptides bound to the ribosome reveal a common mechanism of protein synthesis inhibition.
Matthieu G Gagnon, Raktim N Roy, Ivan B Lomakin, Tanja Florin, Alexander S Mankin, Thomas A Steitz. Nucleic Acids Res 2016
89
100

Quantitative analysis of ribosome-mRNA complexes at different translation stages.
Nikolay E Shirokikh, Elena Z Alkalaeva, Konstantin S Vassilenko, Zhanna A Afonina, Olga M Alekhina, Lev L Kisselev, Alexander S Spirin. Nucleic Acids Res 2010
27
100

C9orf72 arginine-rich dipeptide proteins interact with ribosomal proteins in vivo to induce a toxic translational arrest that is rescued by eIF1A.
Thomas G Moens, Teresa Niccoli, Katherine M Wilson, Magda L Atilano, Nicol Birsa, Lauren M Gittings, Benedikt V Holbling, Miranda C Dyson, Annora Thoeng, Jacob Neeves,[...]. Acta Neuropathol 2019
50
100

Assembly and analysis of eukaryotic translation initiation complexes.
Andrey V Pisarev, Anett Unbehaun, Christopher U T Hellen, Tatyana V Pestova. Methods Enzymol 2007
88
100

Roadblocks and resolutions in eukaryotic translation.
Anthony P Schuller, Rachel Green. Nat Rev Mol Cell Biol 2018
87
100


Frontotemporal Dementia.
Nicholas T Olney, Salvatore Spina, Bruce L Miller. Neurol Clin 2017
147
100


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.