A citation-based method for searching scientific literature

Liang Chen, Chuan Huang, Ge Shan. Trends Biochem Sci 2022
Times Cited: 15







List of co-cited articles
94 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


The biogenesis, biology and characterization of circular RNAs.
Lasse S Kristensen, Maria S Andersen, Lotte V W Stagsted, Karoline K Ebbesen, Thomas B Hansen, Jørgen Kjems. Nat Rev Genet 2019
53

Circular RNAs are abundant, conserved, and associated with ALU repeats.
William R Jeck, Jessica A Sorrentino, Kai Wang, Michael K Slevin, Christin E Burd, Jinze Liu, William F Marzluff, Norman E Sharpless. RNA 2013
46

Exon-intron circular RNAs regulate transcription in the nucleus.
Zhaoyong Li, Chuan Huang, Chun Bao, Liang Chen, Mei Lin, Xiaolin Wang, Guolin Zhong, Bin Yu, Wanchen Hu, Limin Dai,[...]. Nat Struct Mol Biol 2015
46


Natural RNA circles function as efficient microRNA sponges.
Thomas B Hansen, Trine I Jensen, Bettina H Clausen, Jesper B Bramsen, Bente Finsen, Christian K Damgaard, Jørgen Kjems. Nature 2013
40

Circular RNAs are a large class of animal RNAs with regulatory potency.
Sebastian Memczak, Marvin Jens, Antigoni Elefsinioti, Francesca Torti, Janna Krueger, Agnieszka Rybak, Luisa Maier, Sebastian D Mackowiak, Lea H Gregersen, Mathias Munschauer,[...]. Nature 2013
33

The RNA binding protein quaking regulates formation of circRNAs.
Simon J Conn, Katherine A Pillman, John Toubia, Vanessa M Conn, Marika Salmanidis, Caroline A Phillips, Suraya Roslan, Andreas W Schreiber, Philip A Gregory, Gregory J Goodall. Cell 2015
33

Circular intronic long noncoding RNAs.
Yang Zhang, Xiao-Ou Zhang, Tian Chen, Jian-Feng Xiang, Qing-Fei Yin, Yu-Hang Xing, Shanshan Zhu, Li Yang, Ling-Ling Chen. Mol Cell 2013
33

Identification of mecciRNAs and their roles in the mitochondrial entry of proteins.
Xu Liu, Xiaolin Wang, Jingxin Li, Shanshan Hu, Yuqi Deng, Hao Yin, Xichen Bao, Qiangfeng Cliff Zhang, Geng Wang, Baolong Wang,[...]. Sci China Life Sci 2020
59
33

The Landscape of Circular RNA in Cancer.
Josh N Vo, Marcin Cieslik, Yajia Zhang, Sudhanshu Shukla, Lanbo Xiao, Yuping Zhang, Yi-Mi Wu, Saravana M Dhanasekaran, Carl G Engelke, Xuhong Cao,[...]. Cell 2019
797
26

Circular RNAs in Eukaryotic Cells.
Liang Chen, Chuan Huang, Xiaolin Wang, Ge Shan. Curr Genomics 2015
102
26

Circ-ZNF609 Is a Circular RNA that Can Be Translated and Functions in Myogenesis.
Ivano Legnini, Gaia Di Timoteo, Francesca Rossi, Mariangela Morlando, Francesca Briganti, Olga Sthandier, Alessandro Fatica, Tiziana Santini, Adrian Andronache, Mark Wade,[...]. Mol Cell 2017
26

Circular RNAs in Cancer: Biogenesis, Function, and Clinical Significance.
Jiao Li, Dan Sun, Wenchen Pu, Jin Wang, Yong Peng. Trends Cancer 2020
214
26

Circular RNAs from BOULE play conserved roles in protection against stress-induced fertility decline.
Liuze Gao, Shuhui Chang, Wenjuan Xia, Xiaolin Wang, Chenwang Zhang, Liping Cheng, Xu Liu, Liang Chen, Qinghua Shi, Juan Huang,[...]. Sci Adv 2020
25
26

A length-dependent evolutionarily conserved pathway controls nuclear export of circular RNAs.
Chuan Huang, Dongming Liang, Deirdre C Tatomer, Jeremy E Wilusz. Genes Dev 2018
171
26

Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2.
Michael I Love, Wolfgang Huber, Simon Anders. Genome Biol 2014
20

Endogenous microRNA sponges: evidence and controversy.
Daniel W Thomson, Marcel E Dinger. Nat Rev Genet 2016
20

Circular RNA profiling reveals an abundant circHIPK3 that regulates cell growth by sponging multiple miRNAs.
Qiupeng Zheng, Chunyang Bao, Weijie Guo, Shuyi Li, Jie Chen, Bing Chen, Yanting Luo, Dongbin Lyu, Yan Li, Guohai Shi,[...]. Nat Commun 2016
20

RNA in cancer.
Gregory J Goodall, Vihandha O Wickramasinghe. Nat Rev Cancer 2021
420
20

CircURI1 interacts with hnRNPM to inhibit metastasis by modulating alternative splicing in gastric cancer.
Xiaolin Wang, Jingxin Li, Xing Bian, Cheng Wu, Jinghan Hua, Shuhui Chang, Tianyi Yu, Hong Li, Yongxiang Li, Shanshan Hu,[...]. Proc Natl Acad Sci U S A 2021
16
20


Genome-wide CRISPR screen identifies HNRNPL as a prostate cancer dependency regulating RNA splicing.
Teng Fei, Yiwen Chen, Tengfei Xiao, Wei Li, Laura Cato, Peng Zhang, Maura B Cotter, Michaela Bowden, Rosina T Lis, Shuang G Zhao,[...]. Proc Natl Acad Sci U S A 2017
181
20

Unique features of long non-coding RNA biogenesis and function.
Jeffrey J Quinn, Howard Y Chang. Nat Rev Genet 2016
20

Circular RNA-encoded oncogenic E-cadherin variant promotes glioblastoma tumorigenicity through activation of EGFR-STAT3 signalling.
Xinya Gao, Xin Xia, Fanying Li, Maolei Zhang, Huangkai Zhou, Xujia Wu, Jian Zhong, Zheng Zhao, Kun Zhao, Dawei Liu,[...]. Nat Cell Biol 2021
95
20

exoRBase: a database of circRNA, lncRNA and mRNA in human blood exosomes.
Shengli Li, Yuchen Li, Bing Chen, Jingjing Zhao, Shulin Yu, Yan Tang, Qiupeng Zheng, Yan Li, Peng Wang, Xianghuo He,[...]. Nucleic Acids Res 2018
305
20

Extensive translation of circular RNAs driven by N6-methyladenosine.
Yun Yang, Xiaojuan Fan, Miaowei Mao, Xiaowei Song, Ping Wu, Yang Zhang, Yongfeng Jin, Yi Yang, Ling-Ling Chen, Yang Wang,[...]. Cell Res 2017
999
20

Translation of CircRNAs.
Nagarjuna Reddy Pamudurti, Osnat Bartok, Marvin Jens, Reut Ashwal-Fluss, Christin Stottmeister, Larissa Ruhe, Mor Hanan, Emanuel Wyler, Daniel Perez-Hernandez, Evelyn Ramberger,[...]. Mol Cell 2017
20

Targeting Mitochondria-Located circRNA SCAR Alleviates NASH via Reducing mROS Output.
Qiyi Zhao, Jiayu Liu, Hong Deng, Ruiying Ma, Jian-You Liao, Huixin Liang, Jingxiong Hu, Jiaqian Li, Zhiyong Guo, Junchao Cai,[...]. Cell 2020
127
20

Comprehensive profiling of circular RNAs with nanopore sequencing and CIRI-long.
Jinyang Zhang, Lingling Hou, Zhenqiang Zuo, Peifeng Ji, Xiaorong Zhang, Yuanchao Xue, Fangqing Zhao. Nat Biotechnol 2021
58
20

Circular RNA is enriched and stable in exosomes: a promising biomarker for cancer diagnosis.
Yan Li, Qiupeng Zheng, Chunyang Bao, Shuyi Li, Weijie Guo, Jiang Zhao, Di Chen, Jianren Gu, Xianghuo He, Shenglin Huang. Cell Res 2015
20

Foxo3 circular RNA retards cell cycle progression via forming ternary complexes with p21 and CDK2.
William W Du, Weining Yang, Elizabeth Liu, Zhenguo Yang, Preet Dhaliwal, Burton B Yang. Nucleic Acids Res 2016
20

circRNA biogenesis competes with pre-mRNA splicing.
Reut Ashwal-Fluss, Markus Meyer, Nagarjuna Reddy Pamudurti, Andranik Ivanov, Osnat Bartok, Mor Hanan, Naveh Evantal, Sebastian Memczak, Nikolaus Rajewsky, Sebastian Kadener. Mol Cell 2014
20

Viroids are single-stranded covalently closed circular RNA molecules existing as highly base-paired rod-like structures.
H L Sanger, G Klotz, D Riesner, H J Gross, A K Kleinschmidt. Proc Natl Acad Sci U S A 1976
20

Circular RNAs are the predominant transcript isoform from hundreds of human genes in diverse cell types.
Julia Salzman, Charles Gawad, Peter Lincoln Wang, Norman Lacayo, Patrick O Brown. PLoS One 2012
20

New progresses of circular RNA biology: from nuclear export to degradation.
Min Zhou, Mei-Sheng Xiao, Zhengguo Li, Chuan Huang. RNA Biol 2021
12
25

Gawky modulates MTF-1-mediated transcription activation and metal discrimination.
Ruirui Jia, Zhenxing Song, Jiamei Lin, Zhengguo Li, Ge Shan, Chuan Huang. Nucleic Acids Res 2021
10
30

Defining an evolutionarily conserved role of GW182 in circular RNA degradation.
Ruirui Jia, Mei-Sheng Xiao, Zhengguo Li, Ge Shan, Chuan Huang. Cell Discov 2019
38
20

Non-coding RNAs in cardiovascular diseases: diagnostic and therapeutic perspectives.
Wolfgang Poller, Stefanie Dimmeler, Stephane Heymans, Tanja Zeller, Jan Haas, Mahir Karakas, David-Manuel Leistner, Philipp Jakob, Shinichi Nakagawa, Stefan Blankenberg,[...]. Eur Heart J 2018
204
13

Circbank: a comprehensive database for circRNA with standard nomenclature.
Ming Liu, Qian Wang, Jian Shen, Burton B Yang, Xiangming Ding. RNA Biol 2019
170
13

Translation and functional roles of circular RNAs in human cancer.
Ming Lei, Guantao Zheng, Qianqian Ning, Junnian Zheng, Dong Dong. Mol Cancer 2020
248
13

HNRNPM controls circRNA biogenesis and splicing fidelity to sustain cancer cell fitness.
Jessica Sy Ho, Federico Di Tullio, Megan Schwarz, Diana Low, Danny Incarnato, Florence Gay, Tommaso Tabaglio, JingXian Zhang, Heike Wollmann, Leilei Chen,[...]. Elife 2021
12
16

Gene regulation by long non-coding RNAs and its biological functions.
Luisa Statello, Chun-Jie Guo, Ling-Ling Chen, Maite Huarte. Nat Rev Mol Cell Biol 2021
13

Hallmarks of cancer: the next generation.
Douglas Hanahan, Robert A Weinberg. Cell 2011
13

Long noncoding RNAs in cancer metastasis.
S John Liu, Ha X Dang, Daniel A Lim, Felix Y Feng, Christopher A Maher. Nat Rev Cancer 2021
136
13

Explaining negative kin discrimination in a cooperative mammal society.
Faye J Thompson, Michael A Cant, Harry H Marshall, Emma I K Vitikainen, Jennifer L Sanderson, Hazel J Nichols, Jason S Gilchrist, Matthew B V Bell, Andrew J Young, Sarah J Hodge,[...]. Proc Natl Acad Sci U S A 2017
29
13

The Biogenesis, Functions, and Challenges of Circular RNAs.
Xiang Li, Li Yang, Ling-Ling Chen. Mol Cell 2018
13

CircInteractome: A web tool for exploring circular RNAs and their interacting proteins and microRNAs.
Dawood B Dudekula, Amaresh C Panda, Ioannis Grammatikakis, Supriyo De, Kotb Abdelmohsen, Myriam Gorospe. RNA Biol 2016
666
13

Mechanisms of non-coding RNA-modulated alternative splicing in cancer.
Xiaolin Wang, Jinghan Hua, Jingxin Li, Jiahui Zhang, Emmanuel Enoch Dzakah, Guozhen Cao, Wenchu Lin. RNA Biol 2022
5
40

Short intronic repeat sequences facilitate circular RNA production.
Dongming Liang, Jeremy E Wilusz. Genes Dev 2014
596
13

Characterization of RNase R-digested cellular RNA source that consists of lariat and circular RNAs from pre-mRNA splicing.
Hitoshi Suzuki, Yuhong Zuo, Jinhua Wang, Michael Q Zhang, Arun Malhotra, Akila Mayeda. Nucleic Acids Res 2006
413
13


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.