A citation-based method for searching scientific literature

Xuan Yang, Binyuan Zhai, Shunxin Wang, Xiangfei Kong, Yingjin Tan, Lin Liu, Xiao Yang, Taicong Tan, Shuxian Zhang, Liangran Zhang. Cell Rep 2021
Times Cited: 3







List of co-cited articles
10 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Recognition of RNA by the S9.6 antibody creates pervasive artifacts when imaging RNA:DNA hybrids.
John A Smolka, Lionel A Sanz, Stella R Hartono, Frédéric Chédin. J Cell Biol 2021
31
66

RNase H1 and H2 Are Differentially Regulated to Process RNA-DNA Hybrids.
Arianna Lockhart, Vanessa Borges Pires, Fabio Bento, Vanessa Kellner, Sarah Luke-Glaser, George Yakoub, Helle D Ulrich, Brian Luke. Cell Rep 2019
47
66

Human Rad52 Promotes XPG-Mediated R-loop Processing to Initiate Transcription-Associated Homologous Recombination Repair.
Takaaki Yasuhara, Reona Kato, Yoshihiko Hagiwara, Bunsyo Shiotani, Motohiro Yamauchi, Shinichiro Nakada, Atsushi Shibata, Kiyoshi Miyagawa. Cell 2018
158
66

R-loops cause replication impairment and genome instability during meiosis.
Maikel Castellano-Pozo, Tatiana García-Muse, Andrés Aguilera. EMBO Rep 2012
57
66


RNase H enables efficient repair of R-loop induced DNA damage.
Jeremy D Amon, Douglas Koshland. Elife 2016
85
66

R Loops: From Physiological to Pathological Roles.
Tatiana García-Muse, Andrés Aguilera. Cell 2019
209
66

Senataxin plays an essential role with DNA damage response proteins in meiotic recombination and gene silencing.
Olivier J Becherel, Abrey J Yeo, Alissa Stellati, Evelyn Y H Heng, John Luff, Amila M Suraweera, Rick Woods, Jean Fleming, Dianne Carrie, Kristine McKinney,[...]. PLoS Genet 2013
107
66


Transcript-RNA-templated DNA recombination and repair.
Havva Keskin, Ying Shen, Fei Huang, Mikir Patel, Taehwan Yang, Katie Ashley, Alexander V Mazin, Francesca Storici. Nature 2014
211
66

The Affinity of the S9.6 Antibody for Double-Stranded RNAs Impacts the Accurate Mapping of R-Loops in Fission Yeast.
Stella R Hartono, Amélie Malapert, Pénélope Legros, Pascal Bernard, Frédéric Chédin, Vincent Vanoosthuyse. J Mol Biol 2018
74
33

Optimizing sporulation conditions for different Saccharomyces cerevisiae strain backgrounds.
Susan L Elrod, Sabrina M Chen, Katja Schwartz, Elizabeth O Shuster. Methods Mol Biol 2009
14
33

NIH Image to ImageJ: 25 years of image analysis.
Caroline A Schneider, Wayne S Rasband, Kevin W Eliceiri. Nat Methods 2012
33

Surface Spreading and Immunostaining of Yeast Chromosomes.
Jennifer Grubb, M Scott Brown, Douglas K Bishop. J Vis Exp 2015
16
33

RNA-DNA hybrid (R-loop) immunoprecipitation mapping: an analytical workflow to evaluate inherent biases.
László Halász, Zsolt Karányi, Beáta Boros-Oláh, Tímea Kuik-Rózsa, Éva Sipos, Éva Nagy, Ágnes Mosolygó-L, Anett Mázló, Éva Rajnavölgyi, Gábor Halmos,[...]. Genome Res 2017
52
33

Real-time imaging of meiotic chromosomes in Saccharomyces cerevisiae.
Romain Koszul, Sei Kameoka, Beth M Weiner. Methods Mol Biol 2009
6
33

Induction and Analysis of Synchronous Meiotic Yeast Cultures.
G Valentin Börner, Rita S Cha. Cold Spring Harb Protoc 2015
12
33

Analysis of Meiotic Recombination and Homolog Interaction during Yeast Meiosis.
G Valentin Börner, Rita S Cha. Cold Spring Harb Protoc 2015
5
33

DNA repair, recombination, and damage signaling.
Anton Gartner, JoAnne Engebrecht. Genetics 2022
4
33


Transcription-coupled nucleotide excision repair factors promote R-loop-induced genome instability.
Julie Sollier, Caroline Townsend Stork, María L García-Rubio, Renee D Paulsen, Andrés Aguilera, Karlene A Cimprich. Mol Cell 2014
325
33

Spatiotemporal Gene Expression Analysis of the Caenorhabditis elegans Germline Uncovers a Syncytial Expression Switch.
Yonatan B Tzur, Eitan Winter, Jinmin Gao, Tamar Hashimshony, Itai Yanai, Monica P Colaiácovo. Genetics 2018
21
33

The splicing factor XAB2 interacts with ERCC1-XPF and XPG for R-loop processing.
Evi Goulielmaki, Maria Tsekrekou, Nikos Batsiotos, Mariana Ascensão-Ferreira, Eleftheria Ledaki, Kalliopi Stratigi, Georgia Chatzinikolaou, Pantelis Topalis, Theodore Kosteas, Janine Altmüller,[...]. Nat Commun 2021
15
33

A new light on the meiotic DSB catalytic complex.
Thomas Robert, Nathalie Vrielynck, Christine Mézard, Bernard de Massy, Mathilde Grelon. Semin Cell Dev Biol 2016
45
33

Transcription-Replication Collisions-A Series of Unfortunate Events.
Commodore St Germain, Hongchang Zhao, Jacqueline H Barlow. Biomolecules 2021
3
33

The auxin-inducible degradation (AID) system enables versatile conditional protein depletion in C. elegans.
Liangyu Zhang, Jordan D Ward, Ze Cheng, Abby F Dernburg. Development 2015
243
33

Genetic and cytological characterization of the recombination protein RAD-51 in Caenorhabditis elegans.
Arno Alpi, Pawel Pasierbek, Anton Gartner, Josef Loidl. Chromosoma 2003
182
33

Single-strand annealing mediates the conservative repair of double-strand DNA breaks in homologous recombination-defective germ cells of Caenorhabditis elegans.
Woori Bae, Seokbong Hong, Mi So Park, Ha-Kyeong Jeong, Myon-Hee Lee, Hyeon-Sook Koo. DNA Repair (Amst) 2019
10
33

Poly(ADP-ribose) glycohydrolase coordinates meiotic DNA double-strand break induction and repair independent of its catalytic activity.
Eva Janisiw, Marilina Raices, Fabiola Balmir, Luis F Paulin, Antoine Baudrimont, Arndt von Haeseler, Judith L Yanowitz, Verena Jantsch, Nicola Silva. Nat Commun 2020
7
33

How Cells Respond to DNA Breaks in Mitosis.
Andrew N Blackford, Manuel Stucki. Trends Biochem Sci 2020
26
33

Functions of Replication Protein A as a Sensor of R Loops and a Regulator of RNaseH1.
Hai Dang Nguyen, Tribhuwan Yadav, Sumanprava Giri, Borja Saez, Timothy A Graubert, Lee Zou. Mol Cell 2017
138
33

RPA complexes in Caenorhabditis elegans meiosis; unique roles in replication, meiotic recombination and apoptosis.
Adam Hefel, Masayoshi Honda, Nicholas Cronin, Kailey Harrell, Pooja Patel, Maria Spies, Sarit Smolikove. Nucleic Acids Res 2021
7
33

Dual Processing of R-Loops and Topoisomerase I Induces Transcription-Dependent DNA Double-Strand Breaks.
Agnese Cristini, Giulia Ricci, Sébastien Britton, Simona Salimbeni, Shar-Yin Naomi Huang, Jessica Marinello, Patrick Calsou, Yves Pommier, Gilles Favre, Giovanni Capranico,[...]. Cell Rep 2019
62
33

Initiation of meiotic homologous recombination: flexibility, impact of histone modifications, and chromatin remodeling.
Lóránt Székvölgyi, Kunihiro Ohta, Alain Nicolas. Cold Spring Harb Perspect Biol 2015
34
33

RAD-51-dependent and -independent roles of a Caenorhabditis elegans BRCA2-related protein during DNA double-strand break repair.
Julie S Martin, Nicole Winkelmann, Mark I R Petalcorin, Michael J McIlwraith, Simon J Boulton. Mol Cell Biol 2005
128
33


Histone H3K9 methylation is dispensable for Caenorhabditis elegans development but suppresses RNA:DNA hybrid-associated repeat instability.
Peter Zeller, Jan Padeken, Robin van Schendel, Veronique Kalck, Marcel Tijsterman, Susan M Gasser. Nat Genet 2016
116
33

Loss of TOP3B leads to increased R-loop formation and genome instability.
Tao Zhang, Mathew Wallis, Vida Petrovic, Jackie Challis, Paul Kalitsis, Damien F Hudson. Open Biol 2019
28
33


Joint molecule resolution requires the redundant activities of MUS-81 and XPF-1 during Caenorhabditis elegans meiosis.
Nigel J O'Neil, Julie S Martin, Jillian L Youds, Jordan D Ward, Mark I R Petalcorin, Anne M Rose, Simon J Boulton. PLoS Genet 2013
47
33

Interplay between structure-specific endonucleases for crossover control during Caenorhabditis elegans meiosis.
Takamune T Saito, Doris Y Lui, Hyun-Min Kim, Katherine Meyer, Monica P Colaiácovo. PLoS Genet 2013
57
33

Differential timing of S phases, X chromosome replication, and meiotic prophase in the C. elegans germ line.
Aimee Jaramillo-Lambert, Marina Ellefson, Anne M Villeneuve, JoAnne Engebrecht. Dev Biol 2007
151
33


Combinatorial regulation of meiotic holliday junction resolution in C. elegans by HIM-6 (BLM) helicase, SLX-4, and the SLX-1, MUS-81 and XPF-1 nucleases.
Ana Agostinho, Bettina Meier, Remi Sonneville, Marlène Jagut, Alexander Woglar, Julian Blow, Verena Jantsch, Anton Gartner. PLoS Genet 2013
69
33

A DNA repair protein and histone methyltransferase interact to promote genome stability in the Caenorhabditis elegans germ line.
Bing Yang, Xia Xu, Logan Russell, Matthew T Sullenberger, Judith L Yanowitz, Eleanor M Maine. PLoS Genet 2019
13
33



Germline survival and apoptosis.
Anton Gartner, Peter R Boag, T Keith Blackwell. WormBook 2008
115
33

Methods for analyzing checkpoint responses in Caenorhabditis elegans.
Anton Gartner, Amy J MacQueen, Anne M Villeneuve. Methods Mol Biol 2004
48
33

RAD51: Beyond the break.
Isabel E Wassing, Fumiko Esashi. Semin Cell Dev Biol 2021
15
33


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.