A citation-based method for searching scientific literature

Diana Arseni, Masato Hasegawa, Alexey G Murzin, Fuyuki Kametani, Makoto Arai, Mari Yoshida, Benjamin Ryskeldi-Falcon. Nature 2022
Times Cited: 33







List of co-cited articles
433 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Ubiquitinated TDP-43 in frontotemporal lobar degeneration and amyotrophic lateral sclerosis.
Manuela Neumann, Deepak M Sampathu, Linda K Kwong, Adam C Truax, Matthew C Micsenyi, Thomas T Chou, Jennifer Bruce, Theresa Schuck, Murray Grossman, Christopher M Clark,[...]. Science 2006
48

Structure-based classification of tauopathies.
Yang Shi, Wenjuan Zhang, Yang Yang, Alexey G Murzin, Benjamin Falcon, Abhay Kotecha, Mike van Beers, Airi Tarutani, Fuyuki Kametani, Holly J Garringer,[...]. Nature 2021
119
39

TDP-43 is a component of ubiquitin-positive tau-negative inclusions in frontotemporal lobar degeneration and amyotrophic lateral sclerosis.
Tetsuaki Arai, Masato Hasegawa, Haruhiko Akiyama, Kenji Ikeda, Takashi Nonaka, Hiroshi Mori, David Mann, Kuniaki Tsuchiya, Mari Yoshida, Yoshio Hashizume,[...]. Biochem Biophys Res Commun 2006
36

Structures of α-synuclein filaments from multiple system atrophy.
Manuel Schweighauser, Yang Shi, Airi Tarutani, Fuyuki Kametani, Alexey G Murzin, Bernardino Ghetti, Tomoyasu Matsubara, Taisuke Tomita, Takashi Ando, Kazuko Hasegawa,[...]. Nature 2020
238
33

Phosphorylated TDP-43 in frontotemporal lobar degeneration and amyotrophic lateral sclerosis.
Masato Hasegawa, Tetsuaki Arai, Takashi Nonaka, Fuyuki Kametani, Mari Yoshida, Yoshio Hashizume, Thomas G Beach, Emanuele Buratti, Francisco Baralle, Mitsuya Morita,[...]. Ann Neurol 2008
489
33

Cryo-EM structures of four polymorphic TDP-43 amyloid cores.
Qin Cao, David R Boyer, Michael R Sawaya, Peng Ge, David S Eisenberg. Nat Struct Mol Biol 2019
110
30

Cryo-EM structure of amyloid fibrils formed by the entire low complexity domain of TDP-43.
Qiuye Li, W Michael Babinchak, Witold K Surewicz. Nat Commun 2021
35
27

Cryo-EM structure and polymorphism of Aβ amyloid fibrils purified from Alzheimer's brain tissue.
Marius Kollmer, William Close, Leonie Funk, Jay Rasmussen, Aref Bsoul, Angelika Schierhorn, Matthias Schmidt, Christina J Sigurdson, Mathias Jucker, Marcus Fändrich. Nat Commun 2019
241
27

Cryo-EM structures of tau filaments from Alzheimer's disease.
Anthony W P Fitzpatrick, Benjamin Falcon, Shaoda He, Alexey G Murzin, Garib Murshudov, Holly J Garringer, R Anthony Crowther, Bernardino Ghetti, Michel Goedert, Sjors H W Scheres. Nature 2017
960
27

Aberrant cleavage of TDP-43 enhances aggregation and cellular toxicity.
Yong-Jie Zhang, Ya-Fei Xu, Casey Cook, Tania F Gendron, Paul Roettges, Christopher D Link, Wen-Lang Lin, Jimei Tong, Monica Castanedes-Casey, Peter Ash,[...]. Proc Natl Acad Sci U S A 2009
430
24

Novel tau filament fold in chronic traumatic encephalopathy encloses hydrophobic molecules.
Benjamin Falcon, Jasenko Zivanov, Wenjuan Zhang, Alexey G Murzin, Holly J Garringer, Ruben Vidal, R Anthony Crowther, Kathy L Newell, Bernardino Ghetti, Michel Goedert,[...]. Nature 2019
322
24

Structures of filaments from Pick's disease reveal a novel tau protein fold.
Benjamin Falcon, Wenjuan Zhang, Alexey G Murzin, Garib Murshudov, Holly J Garringer, Ruben Vidal, R Anthony Crowther, Bernardino Ghetti, Sjors H W Scheres, Michel Goedert. Nature 2018
385
24

Novel tau filament fold in corticobasal degeneration.
Wenjuan Zhang, Airi Tarutani, Kathy L Newell, Alexey G Murzin, Tomoyasu Matsubara, Benjamin Falcon, Ruben Vidal, Holly J Garringer, Yang Shi, Takeshi Ikeuchi,[...]. Nature 2020
210
24

Cryo-EM structures of amyloid-β 42 filaments from human brains.
Yang Yang, Diana Arseni, Wenjuan Zhang, Melissa Huang, Sofia Lövestam, Manuel Schweighauser, Abhay Kotecha, Alexey G Murzin, Sew Y Peak-Chew, Jennifer Macdonald,[...]. Science 2022
49
21

Disturbance of nuclear and cytoplasmic TAR DNA-binding protein (TDP-43) induces disease-like redistribution, sequestration, and aggregate formation.
Matthew J Winton, Lionel M Igaz, Margaret M Wong, Linda K Kwong, John Q Trojanowski, Virginia M-Y Lee. J Biol Chem 2008
415
21

Molecular Mechanisms of TDP-43 Misfolding and Pathology in Amyotrophic Lateral Sclerosis.
Archana Prasad, Vidhya Bharathi, Vishwanath Sivalingam, Amandeep Girdhar, Basant K Patel. Front Mol Neurosci 2019
253
21

Structural determinants of the cellular localization and shuttling of TDP-43.
Youhna M Ayala, Paola Zago, Andrea D'Ambrogio, Ya-Fei Xu, Leonard Petrucelli, Emanuele Buratti, Francisco E Baralle. J Cell Sci 2008
379
21

TDP-43 immunoreactivity in hippocampal sclerosis and Alzheimer's disease.
Catalina Amador-Ortiz, Wen-Lang Lin, Zeshan Ahmed, David Personett, Peter Davies, Ranjan Duara, Neill R Graff-Radford, Michael L Hutton, Dennis W Dickson. Ann Neurol 2007
612
18

A single N-terminal phosphomimic disrupts TDP-43 polymerization, phase separation, and RNA splicing.
Ailin Wang, Alexander E Conicella, Hermann Broder Schmidt, Erik W Martin, Shannon N Rhoads, Ashley N Reeb, Amanda Nourse, Daniel Ramirez Montero, Veronica H Ryan, Rajat Rohatgi,[...]. EMBO J 2018
181
18

Characterizing the RNA targets and position-dependent splicing regulation by TDP-43.
James R Tollervey, Tomaž Curk, Boris Rogelj, Michael Briese, Matteo Cereda, Melis Kayikci, Julian König, Tibor Hortobágyi, Agnes L Nishimura, Vera Zupunski,[...]. Nat Neurosci 2011
717
18

Prion-like properties of pathological TDP-43 aggregates from diseased brains.
Takashi Nonaka, Masami Masuda-Suzukake, Tetsuaki Arai, Yoko Hasegawa, Hiroyasu Akatsu, Tomokazu Obi, Mari Yoshida, Shigeo Murayama, David M A Mann, Haruhiko Akiyama,[...]. Cell Rep 2013
308
18

Common variants at 7p21 are associated with frontotemporal lobar degeneration with TDP-43 inclusions.
Vivianna M Van Deerlin, Patrick M A Sleiman, Maria Martinez-Lage, Alice Chen-Plotkin, Li-San Wang, Neill R Graff-Radford, Dennis W Dickson, Rosa Rademakers, Bradley F Boeve, Murray Grossman,[...]. Nat Genet 2010
359
18

Amyloid fibrils in FTLD-TDP are composed of TMEM106B and not TDP-43.
Yi Xiao Jiang, Qin Cao, Michael R Sawaya, Romany Abskharon, Peng Ge, Michael DeTure, Dennis W Dickson, Janine Y Fu, Rachel R Ogorzalek Loo, Joseph A Loo,[...]. Nature 2022
12
50

Mass spectrometric analysis of accumulated TDP-43 in amyotrophic lateral sclerosis brains.
Fuyuki Kametani, Tomokazu Obi, Takeo Shishido, Hiroyasu Akatsu, Shigeo Murayama, Yuko Saito, Mari Yoshida, Masato Hasegawa. Sci Rep 2016
85
18

The Pathobiology of TDP-43 C-Terminal Fragments in ALS and FTLD.
Britt A Berning, Adam K Walker. Front Neurosci 2019
72
18

Neuropathological stageing of Alzheimer-related changes.
H Braak, E Braak. Acta Neuropathol 1991
15

TDP-43 proteinopathies: a new wave of neurodegenerative diseases.
Eva Maria Johanna de Boer, Viyanti K Orie, Timothy Williams, Mark R Baker, Hugo M De Oliveira, Tuomo Polvikoski, Matthew Silsby, Parvathi Menon, Mehdi van den Bos, Glenda M Halliday,[...]. J Neurol Neurosurg Psychiatry 2020
72
15

Limbic-predominant age-related TDP-43 encephalopathy (LATE): consensus working group report.
Peter T Nelson, Dennis W Dickson, John Q Trojanowski, Clifford R Jack, Patricia A Boyle, Konstantinos Arfanakis, Rosa Rademakers, Irina Alafuzoff, Johannes Attems, Carol Brayne,[...]. Brain 2019
507
15

TDP-43 is intercellularly transmitted across axon terminals.
Marisa S Feiler, Benjamin Strobel, Axel Freischmidt, Anika M Helferich, Julia Kappel, Bryson M Brewer, Deyu Li, Dietmar R Thal, Paul Walther, Albert C Ludolph,[...]. J Cell Biol 2015
184
15

TDP-43 is recruited to stress granules in conditions of oxidative insult.
Claudia Colombrita, Eleonora Zennaro, Claudia Fallini, Markus Weber, Andreas Sommacal, Emanuele Buratti, Vincenzo Silani, Antonia Ratti. J Neurochem 2009
342
15

RNA Binding Antagonizes Neurotoxic Phase Transitions of TDP-43.
Jacob R Mann, Amanda M Gleixner, Jocelyn C Mauna, Edward Gomes, Michael R DeChellis-Marks, Patrick G Needham, Katie E Copley, Bryan Hurtle, Bede Portz, Noah J Pyles,[...]. Neuron 2019
212
15

ALS Mutations Disrupt Phase Separation Mediated by α-Helical Structure in the TDP-43 Low-Complexity C-Terminal Domain.
Alexander E Conicella, Gül H Zerze, Jeetain Mittal, Nicolas L Fawzi. Structure 2016
403
15


Disease-linked TDP-43 hyperphosphorylation suppresses TDP-43 condensation and aggregation.
Lara A Gruijs da Silva, Francesca Simonetti, Saskia Hutten, Henrick Riemenschneider, Erin L Sternburg, Lisa M Pietrek, Jakob Gebel, Volker Dötsch, Dieter Edbauer, Gerhard Hummer,[...]. EMBO J 2022
18
27

Patient-derived frontotemporal lobar degeneration brain extracts induce formation and spreading of TDP-43 pathology in vivo.
Sílvia Porta, Yan Xu, Clark R Restrepo, Linda K Kwong, Bin Zhang, Hannah J Brown, Edward B Lee, John Q Trojanowski, Virginia M-Y Lee. Nat Commun 2018
104
15

Helical reconstruction in RELION.
Shaoda He, Sjors H W Scheres. J Struct Biol 2017
223
15

Heparin-induced tau filaments are polymorphic and differ from those in Alzheimer's and Pick's diseases.
Wenjuan Zhang, Benjamin Falcon, Alexey G Murzin, Juan Fan, R Anthony Crowther, Michel Goedert, Sjors Hw Scheres. Elife 2019
212
15

Tau PTM Profiles Identify Patient Heterogeneity and Stages of Alzheimer's Disease.
Hendrik Wesseling, Waltraud Mair, Mukesh Kumar, Christoph N Schlaffner, Shaojun Tang, Pieter Beerepoot, Benoit Fatou, Amanda J Guise, Long Cheng, Shuko Takeda,[...]. Cell 2020
143
15

Assembly of microtubule-associated protein tau into Alzheimer-like filaments induced by sulphated glycosaminoglycans.
M Goedert, R Jakes, M G Spillantini, M Hasegawa, M J Smith, R A Crowther. Nature 1996
781
15

A harmonized classification system for FTLD-TDP pathology.
Ian R A Mackenzie, Manuela Neumann, Atik Baborie, Deepak M Sampathu, Daniel Du Plessis, Evelyn Jaros, Robert H Perry, John Q Trojanowski, David M A Mann, Virginia M Y Lee. Acta Neuropathol 2011
646
15

Age-dependent formation of TMEM106B amyloid filaments in human brains.
Manuel Schweighauser, Diana Arseni, Mehtap Bacioglu, Melissa Huang, Sofia Lövestam, Yang Shi, Yang Yang, Wenjuan Zhang, Abhay Kotecha, Holly J Garringer,[...]. Nature 2022
13
38

Stages of pTDP-43 pathology in amyotrophic lateral sclerosis.
Johannes Brettschneider, Kelly Del Tredici, Jon B Toledo, John L Robinson, David J Irwin, Murray Grossman, EunRan Suh, Vivianna M Van Deerlin, Elisabeth M Wood, Young Baek,[...]. Ann Neurol 2013
599
15

TDP-43 condensation properties specify its RNA-binding and regulatory repertoire.
Martina Hallegger, Anob M Chakrabarti, Flora C Y Lee, Bo Lim Lee, Aram G Amalietti, Hana M Odeh, Katie E Copley, Jack D Rubien, Bede Portz, Klara Kuret,[...]. Cell 2021
32
12

Concomitant TAR-DNA-binding protein 43 pathology is present in Alzheimer disease and corticobasal degeneration but not in other tauopathies.
Kunihiro Uryu, Hanae Nakashima-Yasuda, Mark S Forman, Linda K Kwong, Christopher M Clark, Murray Grossman, Bruce L Miller, Hans A Kretzschmar, Virginia M-Y Lee, John Q Trojanowski,[...]. J Neuropathol Exp Neurol 2008
286
12


An acetylation switch controls TDP-43 function and aggregation propensity.
Todd J Cohen, Andrew W Hwang, Clark R Restrepo, Chao-Xing Yuan, John Q Trojanowski, Virginia M Y Lee. Nat Commun 2015
148
12

Poly(ADP-Ribose) Prevents Pathological Phase Separation of TDP-43 by Promoting Liquid Demixing and Stress Granule Localization.
Leeanne McGurk, Edward Gomes, Lin Guo, Jelena Mojsilovic-Petrovic, Van Tran, Robert G Kalb, James Shorter, Nancy M Bonini. Mol Cell 2018
202
12

Abnormal phosphorylation of Ser409/410 of TDP-43 in FTLD-U and ALS.
Yuki Inukai, Takashi Nonaka, Tetsuaki Arai, Mari Yoshida, Yoshio Hashizume, Thomas G Beach, Emanuele Buratti, Francisco E Baralle, Haruhiko Akiyama, Shin-ichi Hisanaga,[...]. FEBS Lett 2008
143
12

TAR DNA-binding protein 43 (TDP-43) liquid-liquid phase separation is mediated by just a few aromatic residues.
Hao-Ru Li, Wan-Chin Chiang, Po-Chun Chou, Won-Jing Wang, Jie-Rong Huang. J Biol Chem 2018
109
12

Nuclear import impairment causes cytoplasmic trans-activation response DNA-binding protein accumulation and is associated with frontotemporal lobar degeneration.
Agnes L Nishimura, Vera Zupunski, Claire Troakes, Claudia Kathe, Pietro Fratta, Michael Howell, Jean-Marc Gallo, Tibor Hortobágyi, Christopher E Shaw, Boris Rogelj. Brain 2010
140
12


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.