A citation-based method for searching scientific literature

Qian Cai, Dhasarathan Ganesan. Neurobiol Dis 2022
Times Cited: 10







List of co-cited articles
92 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Exome sequencing reveals VCP mutations as a cause of familial ALS.
Janel O Johnson, Jessica Mandrioli, Michael Benatar, Yevgeniya Abramzon, Vivianna M Van Deerlin, John Q Trojanowski, J Raphael Gibbs, Maura Brunetti, Susan Gronka, Joanne Wuu,[...]. Neuron 2010
894
30

Mutations of optineurin in amyotrophic lateral sclerosis.
Hirofumi Maruyama, Hiroyuki Morino, Hidefumi Ito, Yuishin Izumi, Hidemasa Kato, Yasuhito Watanabe, Yoshimi Kinoshita, Masaki Kamada, Hiroyuki Nodera, Hidenori Suzuki,[...]. Nature 2010
900
30

Guidelines for the use and interpretation of assays for monitoring autophagy (4th edition)1.
Daniel J Klionsky, Amal Kamal Abdel-Aziz, Sara Abdelfatah, Mahmoud Abdellatif, Asghar Abdoli, Steffen Abel, Hagai Abeliovich, Marie H Abildgaard, Yakubu Princely Abudu, Abraham Acevedo-Arozena,[...]. Autophagy 2021
748
30


An overview of autophagy: morphology, mechanism, and regulation.
Katherine R Parzych, Daniel J Klionsky. Antioxid Redox Signal 2014
30

Autophagy fights disease through cellular self-digestion.
Noboru Mizushima, Beth Levine, Ana Maria Cuervo, Daniel J Klionsky. Nature 2008
30

Loss of autophagy in the central nervous system causes neurodegeneration in mice.
Masaaki Komatsu, Satoshi Waguri, Tomoki Chiba, Shigeo Murata, Jun-ichi Iwata, Isei Tanida, Takashi Ueno, Masato Koike, Yasuo Uchiyama, Eiki Kominami,[...]. Nature 2006
30

VCP-dependent muscle degeneration is linked to defects in a dynamic tubular lysosomal network in vivo.
Alyssa E Johnson, Huidy Shu, Anna G Hauswirth, Amy Tong, Graeme W Davis. Elife 2015
55
20

Proteasome and p97 mediate mitophagy and degradation of mitofusins induced by Parkin.
Atsushi Tanaka, Megan M Cleland, Shan Xu, Derek P Narendra, Der-Fen Suen, Mariusz Karbowski, Richard J Youle. J Cell Biol 2010
963
20

Selective autophagy: ubiquitin-mediated recognition and beyond.
Claudine Kraft, Matthias Peter, Kay Hofmann. Nat Cell Biol 2010
472
20

A Crucial Role for the Protein Quality Control System in Motor Neuron Diseases.
Riccardo Cristofani, Valeria Crippa, Maria Elena Cicardi, Barbara Tedesco, Veronica Ferrari, Marta Chierichetti, Elena Casarotto, Margherita Piccolella, Elio Messi, Mariarita Galbiati,[...]. Front Aging Neurosci 2020
11
20

TDP-43 mediates degeneration in a novel Drosophila model of disease caused by mutations in VCP/p97.
Gillian P Ritson, Sara K Custer, Brian D Freibaum, Jake B Guinto, Dyanna Geffel, Jennifer Moore, Waixing Tang, Matthew J Winton, Manuela Neumann, John Q Trojanowski,[...]. J Neurosci 2010
195
20

HspB8 and Bag3: a new chaperone complex targeting misfolded proteins to macroautophagy.
Serena Carra, Samuel J Seguin, Jacques Landry. Autophagy 2008
171
20

A gene network regulating lysosomal biogenesis and function.
Marco Sardiello, Michela Palmieri, Alberto di Ronza, Diego Luis Medina, Marta Valenza, Vincenzo Alessandro Gennarino, Chiara Di Malta, Francesca Donaudy, Valerio Embrione, Roman S Polishchuk,[...]. Science 2009
20


Inclusion body myopathy associated with Paget disease of bone and frontotemporal dementia is caused by mutant valosin-containing protein.
Giles D J Watts, Jill Wymer, Margaret J Kovach, Sarju G Mehta, Steven Mumm, Daniel Darvish, Alan Pestronk, Michael P Whyte, Virginia E Kimonis. Nat Genet 2004
993
20

VCP/p97 regulates Beclin-1-dependent autophagy initiation.
Sandra M Hill, Lidia Wrobel, Avraham Ashkenazi, Marian Fernandez-Estevez, Keith Tan, Roland W Bürli, David C Rubinsztein. Nat Chem Biol 2021
29
20

Autosomal dominant inclusion body myopathy, Paget disease of bone, and frontotemporal dementia.
Virginia E Kimonis, Giles D J Watts. Alzheimer Dis Assoc Disord 2005
41
20

The nutrient-responsive transcription factor TFE3 promotes autophagy, lysosomal biogenesis, and clearance of cellular debris.
José A Martina, Heba I Diab, Li Lishu, Lim Jeong-A, Simona Patange, Nina Raben, Rosa Puertollano. Sci Signal 2014
372
20


Delineating the genetic heterogeneity of ALS using targeted high-throughput sequencing.
Kevin P Kenna, Russell L McLaughlin, Susan Byrne, Marwa Elamin, Mark Heverin, Elaine M Kenny, Paul Cormican, Derek W Morris, Colette G Donaghy, Daniel G Bradley,[...]. J Med Genet 2013
129
20

Trehalose induces autophagy via lysosomal-mediated TFEB activation in models of motoneuron degeneration.
Paola Rusmini, Katia Cortese, Valeria Crippa, Riccardo Cristofani, Maria Elena Cicardi, Veronica Ferrari, Giulia Vezzoli, Barbara Tedesco, Marco Meroni, Elio Messi,[...]. Autophagy 2019
175
20

The ubiquitin-selective segregase VCP/p97 orchestrates the response to DNA double-strand breaks.
Mayura Meerang, Danilo Ritz, Shreya Paliwal, Zuzana Garajova, Matthias Bosshard, Niels Mailand, Pavel Janscak, Ulrich Hübscher, Hemmo Meyer, Kristijan Ramadan. Nat Cell Biol 2011
193
20

Genotype-phenotype studies of VCP-associated inclusion body myopathy with Paget disease of bone and/or frontotemporal dementia.
S G Mehta, M Khare, R Ramani, G D J Watts, M Simon, K E Osann, S Donkervoort, E Dec, A Nalbandian, J Platt,[...]. Clin Genet 2013
68
20


Specific inhibition of p97/VCP ATPase and kinetic analysis demonstrate interaction between D1 and D2 ATPase domains.
Tsui-Fen Chou, Stacie L Bulfer, Conrad C Weihl, Kelin Li, Lev G Lis, Michael A Walters, Frank J Schoenen, Henry J Lin, Raymond J Deshaies, Michelle R Arkin. J Mol Biol 2014
77
20

Lysosomal physiology.
Haoxing Xu, Dejian Ren. Annu Rev Physiol 2015
543
20


Aggrephagy: selective disposal of protein aggregates by macroautophagy.
Trond Lamark, Terje Johansen. Int J Cell Biol 2012
283
20

The crystal structure of murine p97/VCP at 3.6A.
Trevor Huyton, Valerie E Pye, Louise C Briggs, Terence C Flynn, Fabienne Beuron, Hisao Kondo, Jianpeng Ma, Xiaodong Zhang, Paul S Freemont. J Struct Biol 2003
147
20

Distinct regulation of autophagic activity by Atg14L and Rubicon associated with Beclin 1-phosphatidylinositol-3-kinase complex.
Yun Zhong, Qing Jun Wang, Xianting Li, Ying Yan, Jonathan M Backer, Brian T Chait, Nathaniel Heintz, Zhenyu Yue. Nat Cell Biol 2009
701
20

Cdc48/p97 promotes degradation of aberrant nascent polypeptides bound to the ribosome.
Rati Verma, Robert S Oania, Natalie J Kolawa, Raymond J Deshaies. Elife 2013
172
20

Autophagy in major human diseases.
Daniel J Klionsky, Giulia Petroni, Ravi K Amaravadi, Eric H Baehrecke, Andrea Ballabio, Patricia Boya, José Manuel Bravo-San Pedro, Ken Cadwell, Francesco Cecconi, Augustine M K Choi,[...]. EMBO J 2021
200
20

The AAA-ATPase p97 is essential for outer mitochondrial membrane protein turnover.
Shan Xu, Guihong Peng, Yang Wang, Shengyun Fang, Mariusz Karbowski. Mol Biol Cell 2011
185
20

Tyrosine phosphorylation regulates cell cycle-dependent nuclear localization of Cdc48p.
F Madeo, J Schlauer, H Zischka, D Mecke, K U Fröhlich. Mol Biol Cell 1998
111
20

The formation of Golgi stacks from vesiculated Golgi membranes requires two distinct fusion events.
U Acharya, R Jacobs, J M Peters, N Watson, M G Farquhar, V Malhotra. Cell 1995
179
20

HDAC6-p97/VCP controlled polyubiquitin chain turnover.
Cyril Boyault, Benoit Gilquin, Yu Zhang, Vladimir Rybin, Elspeth Garman, Wolfram Meyer-Klaucke, Patrick Matthias, Christoph W Müller, Saadi Khochbin. EMBO J 2006
213
20



The role of the N-domain in the ATPase activity of the mammalian AAA ATPase p97/VCP.
Hajime Niwa, Caroline A Ewens, Chun Tsang, Heidi O Yeung, Xiaodong Zhang, Paul S Freemont. J Biol Chem 2012
89
20

VCP/p97 is essential for maturation of ubiquitin-containing autophagosomes and this function is impaired by mutations that cause IBMPFD.
Emilie Tresse, Florian A Salomons, Jouni Vesa, Laura C Bott, Virginia Kimonis, Tso-Pang Yao, Nico P Dantuma, J Paul Taylor. Autophagy 2010
325
20

Autophagy requires endoplasmic reticulum targeting of the PI3-kinase complex via Atg14L.
Kohichi Matsunaga, Eiji Morita, Tatsuya Saitoh, Shizuo Akira, Nicholas T Ktistakis, Tetsuro Izumi, Takeshi Noda, Tamotsu Yoshimori. J Cell Biol 2010
312
20

Molecular pathways: autophagy in cancer--a matter of timing and context.
Michelle Cicchini, Vassiliki Karantza, Bing Xia. Clin Cancer Res 2015
55
20

Valosin-containing protein (VCP) is required for autophagy and is disrupted in VCP disease.
Jeong-Sun Ju, Rodrigo A Fuentealba, Sara E Miller, Erin Jackson, David Piwnica-Worms, Robert H Baloh, Conrad C Weihl. J Cell Biol 2009
377
20

VCP maintains lysosomal homeostasis and TFEB activity in differentiated skeletal muscle.
Khalid Arhzaouy, Chrisovalantis Papadopoulos, Nina Schulze, Sara K Pittman, Hemmo Meyer, Conrad C Weihl. Autophagy 2019
33
20

Key steps in ERAD of luminal ER proteins reconstituted with purified components.
Alexander Stein, Annamaria Ruggiano, Pedro Carvalho, Tom A Rapoport. Cell 2014
135
20

VCP/p97 cooperates with YOD1, UBXD1 and PLAA to drive clearance of ruptured lysosomes by autophagy.
Chrisovalantis Papadopoulos, Philipp Kirchner, Monika Bug, Daniel Grum, Lisa Koerver, Nina Schulze, Robert Poehler, Alina Dressler, Sven Fengler, Khalid Arhzaouy,[...]. EMBO J 2017
180
20

VCP/p97 in abnormal protein aggregates, cytoplasmic vacuoles, and cell death, phenotypes relevant to neurodegeneration.
M Hirabayashi, K Inoue, K Tanaka, K Nakadate, Y Ohsawa, Y Kamei, A H Popiel, A Sinohara, A Iwamatsu, Y Kimura,[...]. Cell Death Differ 2001
212
20

TFEB links autophagy to lysosomal biogenesis.
Carmine Settembre, Chiara Di Malta, Vinicia Assunta Polito, Moises Garcia Arencibia, Francesco Vetrini, Serkan Erdin, Serpil Uckac Erdin, Tuong Huynh, Diego Medina, Pasqualina Colella,[...]. Science 2011
20

HDAC6 and microtubules are required for autophagic degradation of aggregated huntingtin.
Atsushi Iwata, Brigit E Riley, Jennifer A Johnston, Ron R Kopito. J Biol Chem 2005
585
20


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.