A citation-based method for searching scientific literature

Suresh Kumar, Simardeep Kaur, Karishma Seem, Santosh Kumar, Trilochan Mohapatra. Front Cell Dev Biol 2021
Times Cited: 3







List of co-cited articles
3 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Epigenetics of Modified DNA Bases: 5-Methylcytosine and Beyond.
Suresh Kumar, Viswanathan Chinnusamy, Trilochan Mohapatra. Front Genet 2018
90
66

Dynamics of DNA Methylation and Its Functions in Plant Growth and Development.
Suresh Kumar, Trilochan Mohapatra. Front Plant Sci 2021
30
66

Characterization of contrasting rice (Oryza sativa L.) genotypes reveals the Pi-efficient schema for phosphate starvation tolerance.
Suresh Kumar, Pallavi, Chetna Chugh, Karishma Seem, Santosh Kumar, K K Vinod, Trilochan Mohapatra. BMC Plant Biol 2021
10
66

Widespread dynamic DNA methylation in response to biotic stress.
Robert H Dowen, Mattia Pelizzola, Robert J Schmitz, Ryan Lister, Jill M Dowen, Joseph R Nery, Jack E Dixon, Joseph R Ecker. Proc Natl Acad Sci U S A 2012
541
33

Single-base resolution maps of cultivated and wild rice methylomes and regulatory roles of DNA methylation in plant gene expression.
Xin Li, Jingde Zhu, Fengyi Hu, Song Ge, Mingzhi Ye, Hui Xiang, Guojie Zhang, Xiaoming Zheng, Hongyu Zhang, Shilai Zhang,[...]. BMC Genomics 2012
183
33

Signaling network in sensing phosphate availability in plants.
Tzyy-Jen Chiou, Shu-I Lin. Annu Rev Plant Biol 2011
395
33


Rice H2A.Z negatively regulates genes responsive to nutrient starvation but promotes expression of key housekeeping genes.
Sara Zahraeifard, Maryam Foroozani, Aliasghar Sepehri, Dong-Ha Oh, Guannan Wang, Venkata Mangu, Bin Chen, Niranjan Baisakh, Maheshi Dassanayake, Aaron P Smith. J Exp Bot 2018
21
33

The floral transcriptome of Eucalyptus grandis.
Kelly J Vining, Elisson Romanel, Rebecca C Jones, Amy Klocko, Marcio Alves-Ferreira, Charles A Hefer, Vindhya Amarasinghe, Palitha Dharmawardhana, Sushma Naithani, Martin Ranik,[...]. New Phytol 2015
33
33

Low-Phosphate Chromatin Dynamics Predict a Cell Wall Remodeling Network in Rice Shoots.
Maryam Foroozani, Sara Zahraeifard, Dong-Ha Oh, Guannan Wang, Maheshi Dassanayake, Aaron P Smith. Plant Physiol 2020
9
33

Histone posttranslational modifications rather than DNA methylation underlie gene reprogramming in pollination-dependent and pollination-independent fruit set in tomato.
Guojian Hu, Baowen Huang, Keke Wang, Pierre Frasse, Elie Maza, Anis Djari, Moussa Benhamed, Philippe Gallusci, Zhengguo Li, Mohamed Zouine,[...]. New Phytol 2021
9
33

Root tip contact with low-phosphate media reprograms plant root architecture.
Sergio Svistoonoff, Audrey Creff, Matthieu Reymond, Cécile Sigoillot-Claude, Lilian Ricaud, Aline Blanchet, Laurent Nussaume, Thierry Desnos. Nat Genet 2007
349
33



Targeted disruption of an orthologue of DOMAINS REARRANGED METHYLASE 2, OsDRM2, impairs the growth of rice plants by abnormal DNA methylation.
Satoru Moritoh, Chang-Ho Eun, Akemi Ono, Hisayo Asao, Yosuke Okano, Katsushi Yamaguchi, Zenpei Shimatani, Amane Koizumi, Rie Terada. Plant J 2012
75
33

Dual Role of the Histone Variant H2A.Z in Transcriptional Regulation of Stress-Response Genes.
Weronika Sura, Michał Kabza, Wojciech M Karlowski, Tomasz Bieluszewski, Marta Kus-Slowinska, Łukasz Pawełoszek, Jan Sadowski, Piotr A Ziolkowski. Plant Cell 2017
91
33


Induced and constitutive DNA methylation in a salinity-tolerant wheat introgression line.
Meng Wang, Lumin Qin, Chao Xie, Wei Li, Jiarui Yuan, Lina Kong, Wenlong Yu, Guangmin Xia, Shuwei Liu. Plant Cell Physiol 2014
62
33

Rice SPX1 and SPX2 inhibit phosphate starvation responses through interacting with PHR2 in a phosphate-dependent manner.
Zhiye Wang, Wenyuan Ruan, Jing Shi, Li Zhang, Dan Xiang, Chao Yang, Changying Li, Zhongchang Wu, Yu Liu, Yanan Yu,[...]. Proc Natl Acad Sci U S A 2014
205
33

Parental epigenetic asymmetry of PRC2-mediated histone modifications in the Arabidopsis endosperm.
Jordi Moreno-Romero, Hua Jiang, Juan Santos-González, Claudia Köhler. EMBO J 2016
77
33

Targets and dynamics of promoter DNA methylation during early mouse development.
Julie Borgel, Sylvain Guibert, Yufeng Li, Hatsune Chiba, Dirk Schübeler, Hiroyuki Sasaki, Thierry Forné, Michael Weber. Nat Genet 2010
419
33

Active DNA demethylation: mechanism and role in plant development.
Yan Li, Suresh Kumar, Weiqiang Qian. Plant Cell Rep 2018
36
33

Stress induced gene expression drives transient DNA methylation changes at adjacent repetitive elements.
David Secco, Chuang Wang, Huixia Shou, Matthew D Schultz, Serge Chiarenza, Laurent Nussaume, Joseph R Ecker, James Whelan, Ryan Lister. Elife 2015
198
33

Variation of DNA methylation patterns associated with gene expression in rice (Oryza sativa) exposed to cadmium.
Sheng Jun Feng, Xue Song Liu, Hua Tao, Shang Kun Tan, Shan Shan Chu, Youko Oono, Xian Duo Zhang, Jian Chen, Zhi Min Yang. Plant Cell Environ 2016
77
33

Histone H2A.Z regulates the expression of several classes of phosphate starvation response genes but not as a transcriptional activator.
Aaron P Smith, Ajay Jain, Roger B Deal, Vinay K Nagarajan, Michael D Poling, Kashchandra G Raghothama, Richard B Meagher. Plant Physiol 2010
113
33


Differential nucleosome occupancy modulates alternative splicing in Arabidopsis thaliana.
Ibtissam Jabre, Saurabh Chaudhary, Wenbin Guo, Maria Kalyna, Anireddy S N Reddy, Weizhong Chen, Runxuan Zhang, Cornelia Wilson, Naeem H Syed. New Phytol 2021
9
33

The transcriptome of zinc deficient maize roots and its relationship to DNA methylation loss.
Svenja Mager, Brigitte Schönberger, Uwe Ludewig. BMC Plant Biol 2018
17
33


Identification and functional characterization of the BAG protein family in Arabidopsis thaliana.
Elena V Doukhanina, Shaorong Chen, Esther van der Zalm, Adam Godzik, John Reed, Martin B Dickman. J Biol Chem 2006
128
33

Transcriptome analysis of a near-isogenic line and its recurrent parent reveals the role of Pup1 QTL in phosphorus deficiency tolerance of rice at tillering stage.
Suresh Kumar, Anuradha Agrawal, Karishma Seem, Santosh Kumar, K K Vinod, Trilochan Mohapatra. Plant Mol Biol 2022
1
100

Identification and expression analysis of OsLPR family revealed the potential roles of OsLPR3 and 5 in maintaining phosphate homeostasis in rice.
Yue Cao, Hao Ai, Ajay Jain, Xueneng Wu, Liang Zhang, Wenxia Pei, Aiqun Chen, Guohua Xu, Shubin Sun. BMC Plant Biol 2016
9
33

Mutation of the RDR1 gene caused genome-wide changes in gene expression, regional variation in small RNA clusters and localized alteration in DNA methylation in rice.
Ningning Wang, Di Zhang, Zhenhui Wang, Hongwei Xun, Jian Ma, Hui Wang, Wei Huang, Ying Liu, Xiuyun Lin, Ning Li,[...]. BMC Plant Biol 2014
23
33

Epigenetic mechanisms of plant stress responses and adaptation.
Pranav Pankaj Sahu, Garima Pandey, Namisha Sharma, Swati Puranik, Mehanathan Muthamilarasan, Manoj Prasad. Plant Cell Rep 2013
117
33

Genome-wide survey reveals dynamic widespread tissue-specific changes in DNA methylation during development.
Ping Liang, Fei Song, Srimoyee Ghosh, Evan Morien, Maochun Qin, Saleh Mahmood, Kyoko Fujiwara, Jun Igarashi, Hiroki Nagase, William A Held. BMC Genomics 2011
95
33

Gardening the genome: DNA methylation in Arabidopsis thaliana.
Simon W-L Chan, Ian R Henderson, Steven E Jacobsen. Nat Rev Genet 2005
573
33

Genome-wide reprogramming of metabolism and regulatory networks of Arabidopsis in response to phosphorus.
Rosa Morcuende, Rajendra Bari, Yves Gibon, Wenming Zheng, Bikram Datt Pant, Oliver Bläsing, Björn Usadel, Tomasz Czechowski, Michael K Udvardi, Mark Stitt,[...]. Plant Cell Environ 2007
334
33

Involvement of OsSPX1 in phosphate homeostasis in rice.
Chuang Wang, Shan Ying, Hongjie Huang, Kuan Li, Ping Wu, Huixia Shou. Plant J 2009
142
33


DNA methylation and gene expression in Mimulus guttatus.
Jack M Colicchio, Fumihito Miura, John K Kelly, Takashi Ito, Lena C Hileman. BMC Genomics 2015
19
33

The cytosolic Fe-S cluster assembly component MET18 is required for the full enzymatic activity of ROS1 in active DNA demethylation.
Xiaokang Wang, Qi Li, Wei Yuan, Zhendong Cao, Bei Qi, Suresh Kumar, Yan Li, Weiqiang Qian. Sci Rep 2016
27
33

Dissection of local and systemic transcriptional responses to phosphate starvation in Arabidopsis.
Marie-Christine Thibaud, Jean-François Arrighi, Vincent Bayle, Serge Chiarenza, Audrey Creff, Regla Bustos, Javier Paz-Ares, Yves Poirier, Laurent Nussaume. Plant J 2010
187
33


Methylation-sensitive expression of a DNA demethylase gene serves as an epigenetic rheostat.
Ben P Williams, Daniela Pignatta, Steven Henikoff, Mary Gehring. PLoS Genet 2015
108
33

Divergence of gene body DNA methylation and evolution of plant duplicate genes.
Jun Wang, Nicholas C Marowsky, Chuanzhu Fan. PLoS One 2014
32
33

Consistent inverse correlation between DNA methylation of the first intron and gene expression across tissues and species.
Dafni Anastasiadi, Anna Esteve-Codina, Francesc Piferrer. Epigenetics Chromatin 2018
160
33

Physiological and transcriptome analysis of iron and phosphorus interaction in rice seedlings.
Luqing Zheng, Fangliang Huang, Reena Narsai, Jiaojiao Wu, Estelle Giraud, Fei He, Longjun Cheng, Fang Wang, Ping Wu, James Whelan,[...]. Plant Physiol 2009
167
33


Uncovering small RNA-mediated responses to phosphate deficiency in Arabidopsis by deep sequencing.
Li-Ching Hsieh, Shu-I Lin, Arthur Chun-Chieh Shih, June-Wei Chen, Wei-Yi Lin, Ching-Ying Tseng, Wen-Hsiung Li, Tzyy-Jen Chiou. Plant Physiol 2009
443
33



Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.