A citation-based method for searching scientific literature

Julia F Greiwe, Thomas C R Miller, Julia Locke, Fabrizio Martino, Steven Howell, Anne Schreiber, Andrea Nans, John F X Diffley, Alessandro Costa. Nat Struct Mol Biol 2022
Times Cited: 4







List of co-cited articles
34 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity



Regulated eukaryotic DNA replication origin firing with purified proteins.
Joseph T P Yeeles, Tom D Deegan, Agnieszka Janska, Anne Early, John F X Diffley. Nature 2015
306
75


CDK-dependent phosphorylation of Sld2 and Sld3 initiates DNA replication in budding yeast.
Seiji Tanaka, Toshiko Umemori, Kazuyuki Hirai, Sachiko Muramatsu, Yoichiro Kamimura, Hiroyuki Araki. Nature 2007
345
75

The mechanism of eukaryotic CMG helicase activation.
Max E Douglas, Ferdos Abid Ali, Alessandro Costa, John F X Diffley. Nature 2018
117
75

How the Eukaryotic Replisome Achieves Rapid and Efficient DNA Replication.
Joseph T P Yeeles, Agnieska Janska, Anne Early, John F X Diffley. Mol Cell 2017
201
75

Incorporation into the prereplicative complex activates the Mcm2-7 helicase for Cdc7-Dbf4 phosphorylation.
Laura I Francis, John C W Randell, Thomas J Takara, Lilen Uchima, Stephen P Bell. Genes Dev 2009
94
75

Concerted loading of Mcm2-7 double hexamers around DNA during DNA replication origin licensing.
Dirk Remus, Fabienne Beuron, Gökhan Tolun, Jack D Griffith, Edward P Morris, John F X Diffley. Cell 2009
443
75

Isolation of the Cdc45/Mcm2-7/GINS (CMG) complex, a candidate for the eukaryotic DNA replication fork helicase.
Stephen E Moyer, Peter W Lewis, Michael R Botchan. Proc Natl Acad Sci U S A 2006
521
75

The Initiation of Eukaryotic DNA Replication.
Alessandro Costa, John F X Diffley. Annu Rev Biochem 2022
5
75

Treslin collaborates with TopBP1 in triggering the initiation of DNA replication.
Akiko Kumagai, Anna Shevchenko, Andrej Shevchenko, William G Dunphy. Cell 2010
168
75

Origin association of Sld3, Sld7, and Cdc45 proteins is a key step for determination of origin-firing timing.
Seiji Tanaka, Ryuichiro Nakato, Yuki Katou, Katsuhiko Shirahige, Hiroyuki Araki. Curr Biol 2011
172
50



Structure of eukaryotic CMG helicase at a replication fork and implications to replisome architecture and origin initiation.
Roxana Georgescu, Zuanning Yuan, Lin Bai, Ruda de Luna Almeida Santos, Jingchuan Sun, Dan Zhang, Olga Yurieva, Huilin Li, Michael E O'Donnell. Proc Natl Acad Sci U S A 2017
130
50

Structure of DNA-CMG-Pol epsilon elucidates the roles of the non-catalytic polymerase modules in the eukaryotic replisome.
Panchali Goswami, Ferdos Abid Ali, Max E Douglas, Julia Locke, Andrew Purkiss, Agnieszka Janska, Patrik Eickhoff, Anne Early, Andrea Nans, Alan M C Cheung,[...]. Nat Commun 2018
58
50

Eukaryotic origin-dependent DNA replication in vitro reveals sequential action of DDK and S-CDK kinases.
Ryan C Heller, Sukhyun Kang, Wendy M Lam, Shuyan Chen, Clara S Chan, Stephen P Bell. Cell 2011
221
50

Cryo-EM Structure of the Fork Protection Complex Bound to CMG at a Replication Fork.
Domagoj Baretić, Michael Jenkyn-Bedford, Valentina Aria, Giuseppe Cannone, Mark Skehel, Joseph T P Yeeles. Mol Cell 2020
59
50

A double-hexameric MCM2-7 complex is loaded onto origin DNA during licensing of eukaryotic DNA replication.
Cecile Evrin, Pippa Clarke, Juergen Zech, Rudi Lurz, Jingchuan Sun, Stefan Uhle, Huilin Li, Bruce Stillman, Christian Speck. Proc Natl Acad Sci U S A 2009
370
50

Mechanism of head-to-head MCM double-hexamer formation revealed by cryo-EM.
Thomas C R Miller, Julia Locke, Julia F Greiwe, John F X Diffley, Alessandro Costa. Nature 2019
50
50

Mcm10 regulates DNA replication elongation by stimulating the CMG replicative helicase.
Marko Lõoke, Michael F Maloney, Stephen P Bell. Genes Dev 2017
68
50

ATR Restrains DNA Synthesis and Mitotic Catastrophe in Response to CDC7 Inhibition.
Michael D Rainey, Declan Bennett, Rachel O'Dea, Melania E Zanchetta, Muriel Voisin, Cathal Seoighe, Corrado Santocanale. Cell Rep 2020
16
50

Chromosome Duplication in Saccharomyces cerevisiae.
Stephen P Bell, Karim Labib. Genetics 2016
200
50


Single-molecule visualization of Saccharomyces cerevisiae leading-strand synthesis reveals dynamic interaction between MTC and the replisome.
Jacob S Lewis, Lisanne M Spenkelink, Grant D Schauer, Flynn R Hill, Roxanna E Georgescu, Michael E O'Donnell, Antoine M van Oijen. Proc Natl Acad Sci U S A 2017
36
50

The Cdk8/19-cyclin C transcription regulator functions in genome replication through metazoan Sld7.
Kerstin Köhler, Luis Sanchez-Pulido, Verena Höfer, Anika Marko, Chris P Ponting, Ambrosius P Snijders, Regina Feederle, Aloys Schepers, Dominik Boos. PLoS Biol 2019
19
50


Inevitability and containment of replication errors for eukaryotic genome lengths spanning megabase to gigabase.
Mohammed Al Mamun, Luca Albergante, Alberto Moreno, James T Carrington, J Julian Blow, Timothy J Newman. Proc Natl Acad Sci U S A 2016
24
50

Structural Insight into the MCM double hexamer activation by Dbf4-Cdc7 kinase.
Jiaxuan Cheng, Ningning Li, Yunjing Huo, Shangyu Dang, Bik-Kwoon Tye, Ning Gao, Yuanliang Zhai. Nat Commun 2022
4
50


Mcm10 promotes rapid isomerization of CMG-DNA for replisome bypass of lagging strand DNA blocks.
Lance D Langston, Ryan Mayle, Grant D Schauer, Olga Yurieva, Daniel Zhang, Nina Y Yao, Roxana E Georgescu, Mike E O'Donnell. Elife 2017
58
50

Helicase loading at chromosomal origins of replication.
Stephen P Bell, Jon M Kaguni. Cold Spring Harb Perspect Biol 2013
90
50

Limiting replication initiation factors execute the temporal programme of origin firing in budding yeast.
Davide Mantiero, Amanda Mackenzie, Anne Donaldson, Philip Zegerman. EMBO J 2011
192
50

S-Cdk-dependent phosphorylation of Sld2 essential for chromosomal DNA replication in budding yeast.
Hiroshi Masumoto, Sachiko Muramatsu, Yoichiro Kamimura, Hiroyuki Araki. Nature 2002
165
50

Cryo-EM structure of Mcm2-7 double hexamer on DNA suggests a lagging-strand DNA extrusion model.
Yasunori Noguchi, Zuanning Yuan, Lin Bai, Sarah Schneider, Gongpu Zhao, Bruce Stillman, Christian Speck, Huilin Li. Proc Natl Acad Sci U S A 2017
51
25

DNA stretching by bacterial initiators promotes replication origin opening.
Karl E Duderstadt, Kevin Chuang, James M Berger. Nature 2011
141
25

Mcm10 has potent strand-annealing activity and limits translocase-mediated fork regression.
Ryan Mayle, Lance Langston, Kelly R Molloy, Dan Zhang, Brian T Chait, Michael E O'Donnell. Proc Natl Acad Sci U S A 2019
20
25

MolProbity: all-atom structure validation for macromolecular crystallography.
Vincent B Chen, W Bryan Arendall, Jeffrey J Headd, Daniel A Keedy, Robert M Immormino, Gary J Kapral, Laura W Murray, Jane S Richardson, David C Richardson. Acta Crystallogr D Biol Crystallogr 2010
25

MCM: one ring to rule them all.
Tom D Deegan, John F X Diffley. Curr Opin Struct Biol 2016
98
25

CUL-2LRR-1 and UBXN-3 drive replisome disassembly during DNA replication termination and mitosis.
Remi Sonneville, Sara Priego Moreno, Axel Knebel, Clare Johnson, C James Hastie, Anton Gartner, Agnieszka Gambus, Karim Labib. Nat Cell Biol 2017
57
25

Structure of RNA polymerase II pre-initiation complex at 2.9 Å defines initial DNA opening.
Sandra Schilbach, Shintaro Aibara, Christian Dienemann, Frauke Grabbe, Patrick Cramer. Cell 2021
16
25

PHENIX: a comprehensive Python-based system for macromolecular structure solution.
Paul D Adams, Pavel V Afonine, Gábor Bunkóczi, Vincent B Chen, Ian W Davis, Nathaniel Echols, Jeffrey J Headd, Li-Wei Hung, Gary J Kapral, Ralf W Grosse-Kunstleve,[...]. Acta Crystallogr D Biol Crystallogr 2010
25

UCSF Chimera--a visualization system for exploratory research and analysis.
Eric F Pettersen, Thomas D Goddard, Conrad C Huang, Gregory S Couch, Daniel M Greenblatt, Elaine C Meng, Thomas E Ferrin. J Comput Chem 2004
25

DNA unwinding mechanism of a eukaryotic replicative CMG helicase.
Zuanning Yuan, Roxana Georgescu, Lin Bai, Dan Zhang, Huilin Li, Michael E O'Donnell. Nat Commun 2020
31
25

The mechanism of DNA replication termination in vertebrates.
James M Dewar, Magda Budzowska, Johannes C Walter. Nature 2015
91
25

Codon bias imposes a targetable limitation on KRAS-driven therapeutic resistance.
Moiez Ali, Erin Kaltenbrun, Gray R Anderson, Sarah Jo Stephens, Sabrina Arena, Alberto Bardelli, Christopher M Counter, Kris C Wood. Nat Commun 2017
30
25

Molecular Basis for ATP-Hydrolysis-Driven DNA Translocation by the CMG Helicase of the Eukaryotic Replisome.
Patrik Eickhoff, Hazal B Kose, Fabrizio Martino, Tatjana Petojevic, Ferdos Abid Ali, Julia Locke, Nele Tamberg, Andrea Nans, James M Berger, Michael R Botchan,[...]. Cell Rep 2019
42
25

ATPase-dependent quality control of DNA replication origin licensing.
Jordi Frigola, Dirk Remus, Amina Mehanna, John F X Diffley. Nature 2013
145
25


The Phyre2 web portal for protein modeling, prediction and analysis.
Lawrence A Kelley, Stefans Mezulis, Christopher M Yates, Mark N Wass, Michael J E Sternberg. Nat Protoc 2015
25


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.