A citation-based method for searching scientific literature

Jorge Ripoll-Rozada, Joshua W C Maxwell, Richard J Payne, Pedro José Barbosa Pereira. Biochem Soc Trans 2022
Times Cited: 1







List of co-cited articles
articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Proteome-Wide Identification of In Vivo ADP-Ribose Acceptor Sites by Liquid Chromatography-Tandem Mass Spectrometry.
Sara C Larsen, Mario Leutert, Vera Bilan, Rita Martello, Stephanie Jungmichel, Clifford Young, Michael O Hottiger, Michael L Nielsen. Methods Mol Biol 2017
20
100

Mapping PARP-1 auto-ADP-ribosylation sites by liquid chromatography-tandem mass spectrometry.
John D Chapman, Jean-Philippe Gagné, Guy G Poirier, David R Goodlett. J Proteome Res 2013
72
100


PARPs.
Anthony K L Leung. Curr Biol 2017
25
100

Hydrofluoric Acid-Based Derivatization Strategy To Profile PARP-1 ADP-Ribosylation by LC-MS/MS.
Jean-Philippe Gagné, Marie-France Langelier, John M Pascal, Guy G Poirier. J Proteome Res 2018
9
100

Electron transfer versus proton transfer in gas-phase ion/ion reactions of polyprotonated peptides.
Harsha P Gunawardena, Min He, Paul A Chrisman, Sharon J Pitteri, Jason M Hogan, Brittany D M Hodges, Scott A McLuckey. J Am Chem Soc 2005
103
100

Decoding Post-Translational Modification Crosstalk With Proteomics.
Mario Leutert, Samuel W Entwisle, Judit Villén. Mol Cell Proteomics 2021
31
100

In vitro and in vivo protein-bound tyrosine nitration characterized by diagonal chromatography.
Bart Ghesquière, Niklaas Colaert, Kenny Helsens, Lien Dejager, Caroline Vanhaute, Katleen Verleysen, Koen Kas, Evy Timmerman, Marc Goethals, Claude Libert,[...]. Mol Cell Proteomics 2009
72
100


Serine is a new target residue for endogenous ADP-ribosylation on histones.
Orsolya Leidecker, Juan José Bonfiglio, Thomas Colby, Qi Zhang, Ilian Atanassov, Roko Zaja, Luca Palazzo, Anna Stockum, Ivan Ahel, Ivan Matic. Nat Chem Biol 2016
133
100

Identification of ADP-Ribose Acceptor Sites on In Vitro Modified Proteins by Liquid Chromatography-Tandem Mass Spectrometry.
Mario Leutert, Vera Bilan, Peter Gehrig, Michael O Hottiger. Methods Mol Biol 2017
3
100

Identification of ADP-ribosylated peptides and ADP-ribose acceptor sites.
Florian Rosenthal, Michael O Hottiger. Front Biosci (Landmark Ed) 2014
21
100

O-sulfonation of serine and threonine: mass spectrometric detection and characterization of a new posttranslational modification in diverse proteins throughout the eukaryotes.
K F Medzihradszky, Z Darula, E Perlson, M Fainzilber, R J Chalkley, H Ball, D Greenbaum, M Bogyo, D R Tyson, R A Bradshaw,[...]. Mol Cell Proteomics 2004
102
100

Toward full peptide sequence coverage by dual fragmentation combining electron-transfer and higher-energy collision dissociation tandem mass spectrometry.
Christian K Frese, A F Maarten Altelaar, Henk van den Toorn, Dirk Nolting, Jens Griep-Raming, Albert J R Heck, Shabaz Mohammed. Anal Chem 2012
194
100

Leghemoglobin is nitrated in functional legume nodules in a tyrosine residue within the heme cavity by a nitrite/peroxide-dependent mechanism.
Martha Sainz, Laura Calvo-Begueria, Carmen Pérez-Rontomé, Stefanie Wienkoop, Joaquín Abián, Christiana Staudinger, Silvina Bartesaghi, Rafael Radi, Manuel Becana. Plant J 2015
38
100

Engineering of a Small Protein Scaffold To Recognize Sulfotyrosine with High Specificity.
Justin Lawrie, Sean Waldrop, Anya Morozov, Wei Niu, Jiantao Guo. ACS Chem Biol 2021
5
100


Analysis of nitrated proteins by nitrotyrosine-specific affinity probes and mass spectrometry.
George Nikov, Vadiraja Bhat, John S Wishnok, Steven R Tannenbaum. Anal Biochem 2003
73
100


Generation and Characterization of Recombinant Antibody-like ADP-Ribose Binding Proteins.
Bryan A Gibson, Lesley B Conrad, Dan Huang, W Lee Kraus. Biochemistry 2017
52
100

Analysis of nitrated proteins in Saccharomyces cerevisiae involved in mating signal transduction.
Jeong Won Kang, Na Young Lee, Kyung-Cho Cho, Min Young Lee, Do-Young Choi, Sang-Hyun Park, Kwang Pyo Kim. Proteomics 2015
13
100




Lack of tyrosylprotein sulfotransferase-2 activity results in altered sperm-egg interactions and loss of ADAM3 and ADAM6 in epididymal sperm.
Matthew R Marcello, Weitao Jia, Julie A Leary, Kevin L Moore, Janice P Evans. J Biol Chem 2011
40
100

Assessment of Intracellular Auto-Modification Levels of ARTD10 Using Mono-ADP-Ribose-Specific Macrodomains 2 and 3 of Murine Artd8.
Mareike Bütepage, Sarah Krieg, Laura Eckei, Jinyu Li, Giulia Rossetti, Patricia Verheugd, Bernhard Lüscher. Methods Mol Biol 2018
9
100

Traumatic Brain Injury and Alzheimer's Disease: The Cerebrovascular Link.
Jaime Ramos-Cejudo, Thomas Wisniewski, Charles Marmar, Henrik Zetterberg, Kaj Blennow, Mony J de Leon, Silvia Fossati. EBioMedicine 2018
139
100

Proteomic analyses identify ARH3 as a serine mono-ADP-ribosylhydrolase.
Jeannette Abplanalp, Mario Leutert, Emilie Frugier, Kathrin Nowak, Roxane Feurer, Jiro Kato, Hans V A Kistemaker, Dmitri V Filippov, Joel Moss, Amedeo Caflisch,[...]. Nat Commun 2017
73
100

Online Parallel Accumulation-Serial Fragmentation (PASEF) with a Novel Trapped Ion Mobility Mass Spectrometer.
Florian Meier, Andreas-David Brunner, Scarlet Koch, Heiner Koch, Markus Lubeck, Michael Krause, Niels Goedecke, Jens Decker, Thomas Kosinski, Melvin A Park,[...]. Mol Cell Proteomics 2018
312
100

ADP-Ribosylation, a Multifaceted Posttranslational Modification Involved in the Control of Cell Physiology in Health and Disease.
Bernhard Lüscher, Mareike Bütepage, Laura Eckei, Sarah Krieg, Patricia Verheugd, Brian H Shilton. Chem Rev 2018
126
100

A Neutrophil Proteomic Signature in Surgical Trauma Wounds.
Sander Bekeschus, Jan-Wilm Lackmann, Denis Gümbel, Matthias Napp, Anke Schmidt, Kristian Wende. Int J Mol Sci 2018
11
100

Comprehensive Single-Shot Proteomics with FAIMS on a Hybrid Orbitrap Mass Spectrometer.
Alexander S Hebert, Satendra Prasad, Michael W Belford, Derek J Bailey, Graeme C McAlister, Susan E Abbatiello, Romain Huguet, Eloy R Wouters, Jean-Jacques Dunyach, Dain R Brademan,[...]. Anal Chem 2018
130
100

Structural analyses of NudT16-ADP-ribose complexes direct rational design of mutants with improved processing of poly(ADP-ribosyl)ated proteins.
Puchong Thirawatananond, Robert Lyle McPherson, Jasmine Malhi, Sara Nathan, Michael J Lambrecht, Matthew Brichacek, Paul J Hergenrother, Anthony K L Leung, Sandra B Gabelli. Sci Rep 2019
11
100

Focus on molecules: sulfotyrosine.
Yogita Kanan, Robert A Hamilton, David M Sherry, Muayyad R Al-Ubaidi. Exp Eye Res 2012
3
100


Phosphoproteome analysis by mass spectrometry and its application to Saccharomyces cerevisiae.
Scott B Ficarro, Mark L McCleland, P Todd Stukenberg, Daniel J Burke, Mark M Ross, Jeffrey Shabanowitz, Donald F Hunt, Forest M White. Nat Biotechnol 2002
100

Establishment of a Mass-Spectrometry-Based Method for the Identification of the In Vivo Whole Blood and Plasma ADP-Ribosylomes.
Stephanie C Lüthi, Anna Howald, Kathrin Nowak, Robert Graage, Giody Bartolomei, Christine Neupert, Xaver Sidler, Deena Leslie Pedrioli, Michael O Hottiger. J Proteome Res 2021
2
100

Chemical genetics and proteome-wide site mapping reveal cysteine MARylation by PARP-7 on immune-relevant protein targets.
Kelsie M Rodriguez, Sara C Buch-Larsen, Ilsa T Kirby, Ivan Rodriguez Siordia, David Hutin, Marit Rasmussen, Denis M Grant, Larry L David, Jason Matthews, Michael L Nielsen,[...]. Elife 2021
22
100

Nitroproteins in Human Astrocytomas Discovered by Gel Electrophoresis and Tandem Mass Spectrometry.
Fang Peng, Jianglin Li, Tianyao Guo, Haiyan Yang, Maoyu Li, Shushan Sang, Xuejun Li, Dominic M Desiderio, Xianquan Zhan. J Am Soc Mass Spectrom 2015
26
100

Novel boronate material affords efficient enrichment of glycopeptides by synergized hydrophilic and affinity interactions.
Jianying Chen, Xiaohu Li, Mengyu Feng, Kun Luo, Juan Yang, Bo Zhang. Anal Bioanal Chem 2017
9
100

Tandem mass spectrometry investigation of ADP-ribosylated kemptide.
Shawna M Hengel, Scott A Shaffer, Brook L Nunn, David R Goodlett. J Am Soc Mass Spectrom 2009
34
100

Sequencing of Sulfopeptides Using Negative-Ion Tandem Mass Spectrometry with Hydrogen Attachment/Abstraction Dissociation.
Daiki Asakawa, Hidenori Takahashi, Sadanori Sekiya, Shinichi Iwamoto, Koichi Tanaka. Anal Chem 2019
9
100

An Introduction to Advanced Targeted Acquisition Methods.
Mirjam van Bentum, Matthias Selbach. Mol Cell Proteomics 2021
11
100

Interplay of Histone Marks with Serine ADP-Ribosylation.
Edward Bartlett, Juan José Bonfiglio, Evgeniia Prokhorova, Thomas Colby, Florian Zobel, Ivan Ahel, Ivan Matic. Cell Rep 2018
53
100

Tyr-nitration in maize CDKA;1 results in lower affinity for ATP binding.
Andrea A E Méndez, Irene C Mangialavori, Andrea V Cabrera, María P Benavides, Jorge M Vázquez-Ramos, Susana M Gallego. Biochim Biophys Acta Proteins Proteom 2020
7
100

Development of a Sample-Preparation Workflow for Sulfopeptide Enrichment: From Target Analysis to Challenges in Shotgun Sulfoproteomics.
Anna Laura Capriotti, Andrea Cerrato, Aldo Laganà, Carmela Maria Montone, Susy Piovesana, Riccardo Zenezini Chiozzi, Chiara Cavaliere. Anal Chem 2020
7
100

Detection of ADP-Ribosylation of the Androgen Receptor Using the Recombinant Macrodomain AF1521 from Archaeoglobus fulgidus.
Teddy Kamata, Chun-Song Yang, Kasey Jividen, Adam Spencer, Natalia Dworak, Luke T Oostdyk, Bryce M Paschal. Methods Mol Biol 2019
4
100


Investigation of tyrosine nitration in proteins by mass spectrometry.
A S Petersson, H Steen, D E Kalume, K Caidahl, P Roepstorff. J Mass Spectrom 2001
111
100

A macrodomain-containing histone rearranges chromatin upon sensing PARP1 activation.
Gyula Timinszky, Susanne Till, Paul O Hassa, Michael Hothorn, Georg Kustatscher, Bianca Nijmeijer, Julien Colombelli, Matthias Altmeyer, Ernst H K Stelzer, Klaus Scheffzek,[...]. Nat Struct Mol Biol 2009
335
100


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.