A citation-based method for searching scientific literature

Tony Hyun Kim, Mark J Schnitzer. Cell 2022
Times Cited: 10







List of co-cited articles
66 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Voltage imaging and optogenetics reveal behaviour-dependent changes in hippocampal dynamics.
Yoav Adam, Jeong J Kim, Shan Lou, Yongxin Zhao, Michael E Xie, Daan Brinks, Hao Wu, Mohammed A Mostajo-Radji, Simon Kheifets, Vicente Parot,[...]. Nature 2019
137
30

MIN1PIPE: A Miniscope 1-Photon-Based Calcium Imaging Signal Extraction Pipeline.
Jinghao Lu, Chunyuan Li, Jonnathan Singh-Alvarado, Zhe Charles Zhou, Flavio Fröhlich, Richard Mooney, Fan Wang. Cell Rep 2018
53
30

Video rate volumetric Ca2+ imaging across cortex using seeded iterative demixing (SID) microscopy.
Tobias Nöbauer, Oliver Skocek, Alejandro J Pernía-Andrade, Lukas Weilguny, Francisca Martínez Traub, Maxim I Molodtsov, Alipasha Vaziri. Nat Methods 2017
56
30

Soma-Targeted Imaging of Neural Circuits by Ribosome Tethering.
Yiming Chen, Heeun Jang, Perry W E Spratt, Seher Kosar, David E Taylor, Rachel A Essner, Ling Bai, David E Leib, Tzu-Wei Kuo, Yen-Chu Lin,[...]. Neuron 2020
29
30

High-speed, cortex-wide volumetric recording of neuroactivity at cellular resolution using light beads microscopy.
Jeffrey Demas, Jason Manley, Frank Tejera, Kevin Barber, Hyewon Kim, Francisca Martínez Traub, Brandon Chen, Alipasha Vaziri. Nat Methods 2021
34
30

Simultaneous Denoising, Deconvolution, and Demixing of Calcium Imaging Data.
Eftychios A Pnevmatikakis, Daniel Soudry, Yuanjun Gao, Timothy A Machado, Josh Merel, David Pfau, Thomas Reardon, Yu Mu, Clay Lacefield, Weijian Yang,[...]. Neuron 2016
423
30

Global Representations of Goal-Directed Behavior in Distinct Cell Types of Mouse Neocortex.
William E Allen, Isaac V Kauvar, Michael Z Chen, Ethan B Richman, Samuel J Yang, Ken Chan, Viviana Gradinaru, Benjamin E Deverman, Liqun Luo, Karl Deisseroth. Neuron 2017
169
30

Precision Calcium Imaging of Dense Neural Populations via a Cell-Body-Targeted Calcium Indicator.
Or A Shemesh, Changyang Linghu, Kiryl D Piatkevich, Daniel Goodwin, Orhan Tunc Celiker, Howard J Gritton, Michael F Romano, Ruixuan Gao, Chih-Chieh Jay Yu, Hua-An Tseng,[...]. Neuron 2020
32
30

Wave optics theory and 3-D deconvolution for the light field microscope.
Michael Broxton, Logan Grosenick, Samuel Yang, Noy Cohen, Aaron Andalman, Karl Deisseroth, Marc Levoy. Opt Express 2013
162
30

Distributed coding of choice, action and engagement across the mouse brain.
Nicholas A Steinmetz, Peter Zatka-Haas, Matteo Carandini, Kenneth D Harris. Nature 2019
199
30

Whole-brain functional imaging at cellular resolution using light-sheet microscopy.
Misha B Ahrens, Michael B Orger, Drew N Robson, Jennifer M Li, Philipp J Keller. Nat Methods 2013
676
30

Long-Term Optical Access to an Estimated One Million Neurons in the Live Mouse Cortex.
Tony Hyun Kim, Yanping Zhang, Jérôme Lecoq, Juergen C Jung, Jane Li, Hongkui Zeng, Cristopher M Niell, Mark J Schnitzer. Cell Rep 2016
122
30

Single-trial neural dynamics are dominated by richly varied movements.
Simon Musall, Matthew T Kaufman, Ashley L Juavinett, Steven Gluf, Anne K Churchland. Nat Neurosci 2019
268
30

Kilohertz two-photon fluorescence microscopy imaging of neural activity in vivo.
Jianglai Wu, Yajie Liang, Shuo Chen, Ching-Lung Hsu, Mariya Chavarha, Stephen W Evans, Dongqing Shi, Michael Z Lin, Kevin K Tsia, Na Ji. Nat Methods 2020
66
30

Population imaging of neural activity in awake behaving mice.
Kiryl D Piatkevich, Seth Bensussen, Hua-An Tseng, Sanaya N Shroff, Violeta Gisselle Lopez-Huerta, Demian Park, Erica E Jung, Or A Shemesh, Christoph Straub, Howard J Gritton,[...]. Nature 2019
100
30

Bright and photostable chemigenetic indicators for extended in vivo voltage imaging.
Ahmed S Abdelfattah, Takashi Kawashima, Amrita Singh, Ondrej Novak, Hui Liu, Yichun Shuai, Yi-Chieh Huang, Luke Campagnola, Stephanie C Seeman, Jianing Yu,[...]. Science 2019
179
30

Ultrasensitive fluorescent proteins for imaging neuronal activity.
Tsai-Wen Chen, Trevor J Wardill, Yi Sun, Stefan R Pulver, Sabine L Renninger, Amy Baohan, Eric R Schreiter, Rex A Kerr, Michael B Orger, Vivek Jayaraman,[...]. Nature 2013
30

Sensitive red protein calcium indicators for imaging neural activity.
Hod Dana, Boaz Mohar, Yi Sun, Sujatha Narayan, Andrew Gordus, Jeremy P Hasseman, Getahun Tsegaye, Graham T Holt, Amy Hu, Deepika Walpita,[...]. Elife 2016
470
30

CaImAn an open source tool for scalable calcium imaging data analysis.
Andrea Giovannucci, Johannes Friedrich, Pat Gunn, Jérémie Kalfon, Brandon L Brown, Sue Ann Koay, Jiannis Taxidis, Farzaneh Najafi, Jeffrey L Gauthier, Pengcheng Zhou,[...]. Elife 2019
218
30

Thirst-associated preoptic neurons encode an aversive motivational drive.
William E Allen, Laura A DeNardo, Michael Z Chen, Cindy D Liu, Kyle M Loh, Lief E Fenno, Charu Ramakrishnan, Karl Deisseroth, Liqun Luo. Science 2017
145
20

A genetically encoded fluorescent sensor for in vivo imaging of GABA.
Jonathan S Marvin, Yoshiteru Shimoda, Vincent Magloire, Marco Leite, Takashi Kawashima, Thomas P Jensen, Ilya Kolb, Erika L Knott, Ondrej Novak, Kaspar Podgorski,[...]. Nat Methods 2019
141
20

Voltage imaging with genetically encoded indicators.
Yongxian Xu, Peng Zou, Adam E Cohen. Curr Opin Chem Biol 2017
93
20

SLM Microscopy: Scanless Two-Photon Imaging and Photostimulation with Spatial Light Modulators.
Volodymyr Nikolenko, Brendon O Watson, Roberto Araya, Alan Woodruff, Darcy S Peterka, Rafael Yuste. Front Neural Circuits 2008
203
20

A wireless miniScope for deep brain imaging in freely moving mice.
Giovanni Barbera, Bo Liang, Lifeng Zhang, Yun Li, Da-Ting Lin. J Neurosci Methods 2019
34
20

Brain-wide neuronal dynamics during motor adaptation in zebrafish.
Misha B Ahrens, Jennifer M Li, Michael B Orger, Drew N Robson, Alexander F Schier, Florian Engert, Ruben Portugues. Nature 2012
377
20

Rapid mesoscale volumetric imaging of neural activity with synaptic resolution.
Rongwen Lu, Yajie Liang, Guanghan Meng, Pengcheng Zhou, Karel Svoboda, Liam Paninski, Na Ji. Nat Methods 2020
48
20

Representational drift in primary olfactory cortex.
Carl E Schoonover, Sarah N Ohashi, Richard Axel, Andrew J P Fink. Nature 2021
44
20

Simultaneous whole-animal 3D imaging of neuronal activity using light-field microscopy.
Robert Prevedel, Young-Gyu Yoon, Maximilian Hoffmann, Nikita Pak, Gordon Wetzstein, Saul Kato, Tina Schrödel, Ramesh Raskar, Manuel Zimmer, Edward S Boyden,[...]. Nat Methods 2014
321
20

Automated analysis of cellular signals from large-scale calcium imaging data.
Eran A Mukamel, Axel Nimmerjahn, Mark J Schnitzer. Neuron 2009
389
20

Spontaneous cortical activity alternates between motifs defined by regional axonal projections.
Majid H Mohajerani, Allen W Chan, Mostafa Mohsenvand, Jeffrey LeDue, Rui Liu, David A McVea, Jamie D Boyd, Yu Tian Wang, Mark Reimers, Timothy H Murphy. Nat Neurosci 2013
222
20

Imaging volumetric dynamics at high speed in mouse and zebrafish brain with confocal light field microscopy.
Zhenkun Zhang, Lu Bai, Lin Cong, Peng Yu, Tianlei Zhang, Wanzhuo Shi, Funing Li, Jiulin Du, Kai Wang. Nat Biotechnol 2021
34
20

Single-shot 3D wide-field fluorescence imaging with a Computational Miniature Mesoscope.
Yujia Xue, Ian G Davison, David A Boas, Lei Tian. Sci Adv 2020
13
20

Spatio-temporal correlations and visual signalling in a complete neuronal population.
Jonathan W Pillow, Jonathon Shlens, Liam Paninski, Alexander Sher, Alan M Litke, E J Chichilnisky, Eero P Simoncelli. Nature 2008
656
20

Chronic, cortex-wide imaging of specific cell populations during behavior.
Joao Couto, Simon Musall, Xiaonan R Sun, Anup Khanal, Steven Gluf, Shreya Saxena, Ian Kinsella, Taiga Abe, John P Cunningham, Liam Paninski,[...]. Nat Protoc 2021
15
20

Network neuroscience.
Danielle S Bassett, Olaf Sporns. Nat Neurosci 2017
757
20

Cortical Observation by Synchronous Multifocal Optical Sampling Reveals Widespread Population Encoding of Actions.
Isaac V Kauvar, Timothy A Machado, Elle Yuen, John Kochalka, Minseung Choi, William E Allen, Gordon Wetzstein, Karl Deisseroth. Neuron 2020
20
20

Iterative tomography with digital adaptive optics permits hour-long intravital observation of 3D subcellular dynamics at millisecond scale.
Jiamin Wu, Zhi Lu, Dong Jiang, Yuduo Guo, Hui Qiao, Yi Zhang, Tianyi Zhu, Yeyi Cai, Xu Zhang, Karl Zhanghao,[...]. Cell 2021
34
20

Technologies for imaging neural activity in large volumes.
Na Ji, Jeremy Freeman, Spencer L Smith. Nat Neurosci 2016
128
20

Genetically encoded indicators of neuronal activity.
Michael Z Lin, Mark J Schnitzer. Nat Neurosci 2016
330
20

Simultaneous multiplane imaging with reverberation two-photon microscopy.
Devin R Beaulieu, Ian G Davison, Kıvılcım Kılıç, Thomas G Bifano, Jerome Mertz. Nat Methods 2020
34
20

Large-scale imaging of cortical dynamics during sensory perception and behavior.
Joseph B Wekselblatt, Erik D Flister, Denise M Piscopo, Cristopher M Niell. J Neurophysiol 2016
127
20

Striatal activity topographically reflects cortical activity.
Andrew J Peters, Julie M J Fabre, Nicholas A Steinmetz, Kenneth D Harris, Matteo Carandini. Nature 2021
48
20

Imaging Cortical Dynamics in GCaMP Transgenic Rats with a Head-Mounted Widefield Macroscope.
Benjamin B Scott, Stephan Y Thiberge, Caiying Guo, D Gowanlock R Tervo, Carlos D Brody, Alla Y Karpova, David W Tank. Neuron 2018
59
20


Unsupervised Discovery of Demixed, Low-Dimensional Neural Dynamics across Multiple Timescales through Tensor Component Analysis.
Alex H Williams, Tony Hyun Kim, Forea Wang, Saurabh Vyas, Stephen I Ryu, Krishna V Shenoy, Mark Schnitzer, Tamara G Kolda, Surya Ganguli. Neuron 2018
82
20

Efficient and accurate extraction of in vivo calcium signals from microendoscopic video data.
Pengcheng Zhou, Shanna L Resendez, Jose Rodriguez-Romaguera, Jessica C Jimenez, Shay Q Neufeld, Andrea Giovannucci, Johannes Friedrich, Eftychios A Pnevmatikakis, Garret D Stuber, Rene Hen,[...]. Elife 2018
218
20


Deep tissue two-photon microscopy.
Fritjof Helmchen, Winfried Denk. Nat Methods 2005
20

Extended field-of-view and increased-signal 3D holographic illumination with time-division multiplexing.
Samuel J Yang, William E Allen, Isaac Kauvar, Aaron S Andalman, Noah P Young, Christina K Kim, James H Marshel, Gordon Wetzstein, Karl Deisseroth. Opt Express 2015
31
20

Recent advances in neurotechnologies with broad potential for neuroscience research.
Abraham Vázquez-Guardado, Yiyuan Yang, Amay J Bandodkar, John A Rogers. Nat Neurosci 2020
40
20


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.