A citation-based method for searching scientific literature

Seung Bum Park, Parker Irvin, Zongyi Hu, Mohsin Khan, Xin Hu, Qiru Zeng, Catherine Chen, Miao Xu, Madeleine Leek, Ruochen Zang, James Brett Case, Wei Zheng, Siyuan Ding, T Jake Liang. mBio 2022
Times Cited: 2







List of co-cited articles
5 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Cryo-EM structure of the 2019-nCoV spike in the prefusion conformation.
Daniel Wrapp, Nianshuang Wang, Kizzmekia S Corbett, Jory A Goldsmith, Ching-Lin Hsieh, Olubukola Abiona, Barney S Graham, Jason S McLellan. Science 2020
100

Inhibition of SARS-CoV-2 (previously 2019-nCoV) infection by a highly potent pan-coronavirus fusion inhibitor targeting its spike protein that harbors a high capacity to mediate membrane fusion.
Shuai Xia, Meiqin Liu, Chao Wang, Wei Xu, Qiaoshuai Lan, Siliang Feng, Feifei Qi, Linlin Bao, Lanying Du, Shuwen Liu,[...]. Cell Res 2020
695
100

A pan-coronavirus fusion inhibitor targeting the HR1 domain of human coronavirus spike.
Shuai Xia, Lei Yan, Wei Xu, Anurodh Shankar Agrawal, Abdullah Algaissi, Chien-Te K Tseng, Qian Wang, Lanying Du, Wenjie Tan, Ian A Wilson,[...]. Sci Adv 2019
252
100

Fusion mechanism of 2019-nCoV and fusion inhibitors targeting HR1 domain in spike protein.
Shuai Xia, Yun Zhu, Meiqin Liu, Qiaoshuai Lan, Wei Xu, Yanling Wu, Tianlei Ying, Shuwen Liu, Zhengli Shi, Shibo Jiang,[...]. Cell Mol Immunol 2020
339
100




Autologous Antibody Responses to an HIV Envelope Glycan Hole Are Not Easily Broadened in Rabbits.
Yuhe R Yang, Laura E McCoy, Marit J van Gils, Raiees Andrabi, Hannah L Turner, Meng Yuan, Christopher A Cottrell, Gabriel Ozorowski, James Voss, Matthias Pauthner,[...]. J Virol 2020
18
50

Safety, tolerance, and efficacy of posaconazole therapy in patients with nonmeningeal disseminated or chronic pulmonary coccidioidomycosis.
Antonino Catanzaro, Gretchen A Cloud, David A Stevens, Bernard E Levine, Paul L Williams, Royce H Johnson, Adrian Rendon, Laurence F Mirels, Jon E Lutz, Melissa Holloway,[...]. Clin Infect Dis 2007
62
50

Repurposing potential of posaconazole and grazoprevir as inhibitors of SARS-CoV-2 helicase.
Syed Hani Abidi, Nahlah Makki Almansour, Daulet Amerzhanov, Khaled S Allemailem, Wardah Rafaqat, Mahmoud A A Ibrahim, Philip la Fleur, Martin Lukac, Syed Ali. Sci Rep 2021
3
50

UCSF Chimera--a visualization system for exploratory research and analysis.
Eric F Pettersen, Thomas D Goddard, Conrad C Huang, Gregory S Couch, Daniel M Greenblatt, Elaine C Meng, Thomas E Ferrin. J Comput Chem 2004
50

gmx_MMPBSA: A New Tool to Perform End-State Free Energy Calculations with GROMACS.
Mario S Valdés-Tresanco, Mario E Valdés-Tresanco, Pedro A Valiente, Ernesto Moreno. J Chem Theory Comput 2021
44
50

VMD: visual molecular dynamics.
W Humphrey, A Dalke, K Schulten. J Mol Graph 1996
50

PACKMOL: a package for building initial configurations for molecular dynamics simulations.
L Martínez, R Andrade, E G Birgin, J M Martínez. J Comput Chem 2009
50

Severe acute respiratory syndrome coronavirus (SARS-CoV) infection inhibition using spike protein heptad repeat-derived peptides.
Berend Jan Bosch, Byron E E Martina, Ruurd Van Der Zee, Jean Lepault, Bert Jan Haijema, Cees Versluis, Albert J R Heck, Raoul De Groot, Albert D M E Osterhaus, Peter J M Rottier. Proc Natl Acad Sci U S A 2004
267
50

Discovery of New Fusion Inhibitor Peptides against SARS-CoV-2 by Targeting the Spike S2 Subunit.
Mahmoud Kandeel, Mizuki Yamamoto, Hideki Tani, Ayako Kobayashi, Jin Gohda, Yasushi Kawaguchi, Byoung Kwon Park, Hyung-Joo Kwon, Jun-Ichiro Inoue, Abdallah Alkattan. Biomol Ther (Seoul) 2021
11
50

Peptide therapeutics: current status and future directions.
Keld Fosgerau, Torsten Hoffmann. Drug Discov Today 2015
50

Avogadro: an advanced semantic chemical editor, visualization, and analysis platform.
Marcus D Hanwell, Donald E Curtis, David C Lonie, Tim Vandermeersch, Eva Zurek, Geoffrey R Hutchison. J Cheminform 2012
50

Drugs that inhibit TMEM16 proteins block SARS-CoV-2 spike-induced syncytia.
Luca Braga, Hashim Ali, Ilaria Secco, Elena Chiavacci, Guilherme Neves, Daniel Goldhill, Rebecca Penn, Jose M Jimenez-Guardeño, Ana M Ortega-Prieto, Rossana Bussani,[...]. Nature 2021
111
50

LIGPLOT: a program to generate schematic diagrams of protein-ligand interactions.
A C Wallace, R A Laskowski, J M Thornton. Protein Eng 1995
50

Current challenges in peptide-based drug discovery.
Laszlo Otvos, John D Wade. Front Chem 2014
194
50

Potent peptidic fusion inhibitors of influenza virus.
Rameshwar U Kadam, Jarek Juraszek, Boerries Brandenburg, Christophe Buyck, Wim B G Schepens, Bart Kesteleyn, Bart Stoops, Rob J Vreeken, Jan Vermond, Wouter Goutier,[...]. Science 2017
82
50

NuMA assemblies organize microtubule asters to establish spindle bipolarity in acentrosomal human cells.
Takumi Chinen, Shohei Yamamoto, Yutaka Takeda, Koki Watanabe, Kanako Kuroki, Kaho Hashimoto, Daisuke Takao, Daiju Kitagawa. EMBO J 2020
20
50


Protocol and Reagents for Pseudotyping Lentiviral Particles with SARS-CoV-2 Spike Protein for Neutralization Assays.
Katharine H D Crawford, Rachel Eguia, Adam S Dingens, Andrea N Loes, Keara D Malone, Caitlin R Wolf, Helen Y Chu, M Alejandra Tortorici, David Veesler, Michael Murphy,[...]. Viruses 2020
381
50

Syncytia formation by SARS-CoV-2-infected cells.
Julian Buchrieser, Jérémy Dufloo, Mathieu Hubert, Blandine Monel, Delphine Planas, Maaran Michael Rajah, Cyril Planchais, Françoise Porrot, Florence Guivel-Benhassine, Sylvie Van der Werf,[...]. EMBO J 2020
161
50

SARS-CoV-2 B.1.617 Indian variants: Are electrostatic potential changes responsible for a higher transmission rate?
Stefano Pascarella, Massimo Ciccozzi, Davide Zella, Martina Bianchi, Francesca Benedetti, Domenico Benvenuto, Francesco Broccolo, Roberto Cauda, Arnaldo Caruso, Silvia Angeletti,[...]. J Med Virol 2021
49
50

SARS-CoV-2-derived fusion inhibitor lipopeptides exhibit highly potent and broad-spectrum activity against divergent human coronaviruses.
Yuanmei Zhu, Danwei Yu, Yue Hu, Tong Wu, Huihui Chong, Yuxian He. Signal Transduct Target Ther 2021
6
50

LDH-A promotes malignant behavior via activation of epithelial-to-mesenchymal transition in lung adenocarcinoma.
Xiao-Ming Hou, Shu-Qiao Yuan, Da Zhao, Xiao-Jun Liu, Xin-An Wu. Biosci Rep 2019
29
50

Discovery of Small Molecule Entry Inhibitors Targeting the Fusion Peptide of SARS-CoV-2 Spike Protein.
Xin Hu, Catherine Z Chen, Miao Xu, Zongyi Hu, Hui Guo, Zina Itkin, Paul Shinn, Parker Ivin, Madeleine Leek, T Jake Liang,[...]. ACS Med Chem Lett 2021
5
50

Bispecific antibodies targeting distinct regions of the spike protein potently neutralize SARS-CoV-2 variants of concern.
Hyeseon Cho, Kristina Kay Gonzales-Wartz, Deli Huang, Meng Yuan, Mary Peterson, Janie Liang, Nathan Beutler, Jonathan L Torres, Yu Cong, Elena Postnikova,[...]. Sci Transl Med 2021
29
50

Rare driver mutations in head and neck squamous cell carcinomas converge on NOTCH signaling.
Sampath K Loganathan, Krista Schleicher, Ahmad Malik, Rene Quevedo, Ellen Langille, Katie Teng, Robin H Oh, Bhavisha Rathod, Ricky Tsai, Payman Samavarchi-Tehrani,[...]. Science 2020
149
50

An Infectious cDNA Clone of SARS-CoV-2.
Xuping Xie, Antonio Muruato, Kumari G Lokugamage, Krishna Narayanan, Xianwen Zhang, Jing Zou, Jianying Liu, Craig Schindewolf, Nathen E Bopp, Patricia V Aguilar,[...]. Cell Host Microbe 2020
343
50

A small-molecule fusion inhibitor of influenza virus is orally active in mice.
Maria J P van Dongen, Rameshwar U Kadam, Jarek Juraszek, Edward Lawson, Boerries Brandenburg, Frederike Schmitz, Wim B G Schepens, Bart Stoops, Harry A van Diepen, Mandy Jongeneelen,[...]. Science 2019
69
50

AutoDock4 and AutoDockTools4: Automated docking with selective receptor flexibility.
Garrett M Morris, Ruth Huey, William Lindstrom, Michel F Sanner, Richard K Belew, David S Goodsell, Arthur J Olson. J Comput Chem 2009
50

Antifungal prophylaxis for prevention of COVID-19-associated pulmonary aspergillosis in critically ill patients: an observational study.
Stefan Hatzl, Alexander C Reisinger, Florian Posch, Juergen Prattes, Martin Stradner, Stefan Pilz, Philipp Eller, Michael Schoerghuber, Wolfgang Toller, Gregor Gorkiewicz,[...]. Crit Care 2021
21
50

Mucosal delivery of a double-stapled RSV peptide prevents nasopulmonary infection.
Gregory H Bird, Sandhya Boyapalle, Terianne Wong, Kwadwo Opoku-Nsiah, Raminder Bedi, W Christian Crannell, Alisa F Perry, Huy Nguyen, Viviana Sampayo, Ankita Devareddy,[...]. J Clin Invest 2014
43
50

25-Hydroxycholesterol-Conjugated EK1 Peptide with Potent and Broad-Spectrum Inhibitory Activity against SARS-CoV-2, Its Variants of Concern, and Other Human Coronaviruses.
Qiaoshuai Lan, Chao Wang, Jie Zhou, Lijue Wang, Fanke Jiao, Yanbo Zhang, Yanxing Cai, Lu Lu, Shuai Xia, Shibo Jiang. Int J Mol Sci 2021
4
50


Trimeric heptad repeat synthetic peptides HR1 and HR2 efficiently inhibit HIV-1 entry.
Olfa Mzoughi, Meritxell Teixido, Rémi Planès, Manutea Serrero, Ibtissem Hamimed, Esther Zurita, Miguel Moreno, Giovana Granados, Faouzi Lakhdar-Ghazal, Lbachir BenMohamed,[...]. Biosci Rep 2019
2
50

Salvianolic acid C potently inhibits SARS-CoV-2 infection by blocking the formation of six-helix bundle core of spike protein.
Chan Yang, Xiaoyan Pan, Xinfeng Xu, Chen Cheng, Yuan Huang, Lin Li, Shibo Jiang, Wei Xu, Gengfu Xiao, Shuwen Liu. Signal Transduct Target Ther 2020
26
50


SARS-CoV-2 Immuno-Pathogenesis and Potential for Diverse Vaccines and Therapies: Opportunities and Challenges.
Andrew R McGill, Roukiah Kahlil, Rinku Dutta, Ryan Green, Mark Howell, Subhra Mohapatra, Shyam S Mohapatra. Infect Dis Rep 2021
9
50

MMPBSA.py: An Efficient Program for End-State Free Energy Calculations.
Bill R Miller, T Dwight McGee, Jason M Swails, Nadine Homeyer, Holger Gohlke, Adrian E Roitberg. J Chem Theory Comput 2012
50

Structures and mechanisms of viral membrane fusion proteins: multiple variations on a common theme.
Judith M White, Sue E Delos, Matthew Brecher, Kathryn Schornberg. Crit Rev Biochem Mol Biol 2008
601
50


SARS-CoV-2 B.1.617.2 Delta variant replication and immune evasion.
Petra Mlcochova, Steven A Kemp, Mahesh Shanker Dhar, Guido Papa, Bo Meng, Isabella A T M Ferreira, Rawlings Datir, Dami A Collier, Anna Albecka, Sujeet Singh,[...]. Nature 2021
432
50


Development of indole compounds as small molecule fusion inhibitors targeting HIV-1 glycoprotein-41.
Guangyan Zhou, Dong Wu, Beth Snyder, Roger G Ptak, Harmeet Kaur, Miriam Gochin. J Med Chem 2011
61
50



Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.