A citation-based method for searching scientific literature

Tarun S Nambiar, Lou Baudrier, Pierre Billon, Alberto Ciccia. Mol Cell 2022
Times Cited: 14







List of co-cited articles
135 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


A programmable dual-RNA-guided DNA endonuclease in adaptive bacterial immunity.
Martin Jinek, Krzysztof Chylinski, Ines Fonfara, Michael Hauer, Jennifer A Doudna, Emmanuelle Charpentier. Science 2012
64

Genome editing with CRISPR-Cas nucleases, base editors, transposases and prime editors.
Andrew V Anzalone, Luke W Koblan, David R Liu. Nat Biotechnol 2020
576
35


Programmable base editing of A•T to G•C in genomic DNA without DNA cleavage.
Nicole M Gaudelli, Alexis C Komor, Holly A Rees, Michael S Packer, Ahmed H Badran, David I Bryson, David R Liu. Nature 2017
35

Programmable editing of a target base in genomic DNA without double-stranded DNA cleavage.
Alexis C Komor, Yongjoo B Kim, Michael S Packer, John A Zuris, David R Liu. Nature 2016
35

Multiplex genome engineering using CRISPR/Cas systems.
Le Cong, F Ann Ran, David Cox, Shuailiang Lin, Robert Barretto, Naomi Habib, Patrick D Hsu, Xuebing Wu, Wenyan Jiang, Luciano A Marraffini,[...]. Science 2013
35

Large deletions induced by Cas9 cleavage.
Fatwa Adikusuma, Sandra Piltz, Mark A Corbett, Michelle Turvey, Shaun R McColl, Karla J Helbig, Michael R Beard, James Hughes, Richard T Pomerantz, Paul Q Thomas. Nature 2018
138
28

CRISPR-engineered T cells in patients with refractory cancer.
Edward A Stadtmauer, Joseph A Fraietta, Megan M Davis, Adam D Cohen, Kristy L Weber, Eric Lancaster, Patricia A Mangan, Irina Kulikovskaya, Minnal Gupta, Fang Chen,[...]. Science 2020
547
28


Kinetics and Fidelity of the Repair of Cas9-Induced Double-Strand DNA Breaks.
Eva K Brinkman, Tao Chen, Marcel de Haas, Hanna A Holland, Waseem Akhtar, Bas van Steensel. Mol Cell 2018
117
28

DNA interrogation by the CRISPR RNA-guided endonuclease Cas9.
Samuel H Sternberg, Sy Redding, Martin Jinek, Eric C Greene, Jennifer A Doudna. Nature 2014
28

Evolutionary classification of CRISPR-Cas systems: a burst of class 2 and derived variants.
Kira S Makarova, Yuri I Wolf, Jaime Iranzo, Sergey A Shmakov, Omer S Alkhnbashi, Stan J J Brouns, Emmanuelle Charpentier, David Cheng, Daniel H Haft, Philippe Horvath,[...]. Nat Rev Microbiol 2020
636
28

Increasing the efficiency of homology-directed repair for CRISPR-Cas9-induced precise gene editing in mammalian cells.
Van Trung Chu, Timm Weber, Benedikt Wefers, Wolfgang Wurst, Sandrine Sander, Klaus Rajewsky, Ralf Kühn. Nat Biotechnol 2015
738
21

Frequent loss of heterozygosity in CRISPR-Cas9-edited early human embryos.
Gregorio Alanis-Lobato, Jasmin Zohren, Afshan McCarthy, Norah M E Fogarty, Nada Kubikova, Emily Hardman, Maria Greco, Dagan Wells, James M A Turner, Kathy K Niakan. Proc Natl Acad Sci U S A 2021
49
21

Advances in genome editing through control of DNA repair pathways.
Charles D Yeh, Christopher D Richardson, Jacob E Corn. Nat Cell Biol 2019
148
21

DNA double-strand break repair-pathway choice in somatic mammalian cells.
Ralph Scully, Arvind Panday, Rajula Elango, Nicholas A Willis. Nat Rev Mol Cell Biol 2019
464
21

Search-and-replace genome editing without double-strand breaks or donor DNA.
Andrew V Anzalone, Peyton B Randolph, Jessie R Davis, Alexander A Sousa, Luke W Koblan, Jonathan M Levy, Peter J Chen, Christopher Wilson, Gregory A Newby, Aditya Raguram,[...]. Nature 2019
21

DNA Repair Profiling Reveals Nonrandom Outcomes at Cas9-Mediated Breaks.
Megan van Overbeek, Daniel Capurso, Matthew M Carter, Matthew S Thompson, Elizabeth Frias, Carsten Russ, John S Reece-Hoyes, Christopher Nye, Scott Gradia, Bastien Vidal,[...]. Mol Cell 2016
241
21

Predicting the mutations generated by repair of Cas9-induced double-strand breaks.
Felicity Allen, Luca Crepaldi, Clara Alsinet, Alexander J Strong, Vitalii Kleshchevnikov, Pietro De Angeli, Petra Páleníková, Anton Khodak, Vladimir Kiselev, Michael Kosicki,[...]. Nat Biotechnol 2018
215
21

CRISPR RNA maturation by trans-encoded small RNA and host factor RNase III.
Elitza Deltcheva, Krzysztof Chylinski, Cynthia M Sharma, Karine Gonzales, Yanjie Chao, Zaid A Pirzada, Maria R Eckert, Jörg Vogel, Emmanuelle Charpentier. Nature 2011
21

Allele-Specific Chromosome Removal after Cas9 Cleavage in Human Embryos.
Michael V Zuccaro, Jia Xu, Carl Mitchell, Diego Marin, Raymond Zimmerman, Bhavini Rana, Everett Weinstein, Rebeca T King, Katherine L Palmerola, Morgan E Smith,[...]. Cell 2020
98
21

A CRISPR-Cas9 gene drive system targeting female reproduction in the malaria mosquito vector Anopheles gambiae.
Andrew Hammond, Roberto Galizi, Kyros Kyrou, Alekos Simoni, Carla Siniscalchi, Dimitris Katsanos, Matthew Gribble, Dean Baker, Eric Marois, Steven Russell,[...]. Nat Biotechnol 2016
538
21

Comprehensive deletion landscape of CRISPR-Cas9 identifies minimal RNA-guided DNA-binding modules.
Arik Shams, Sean A Higgins, Christof Fellmann, Thomas G Laughlin, Benjamin L Oakes, Rachel Lew, Shin Kim, Maria Lukarska, Madeline Arnold, Brett T Staahl,[...]. Nat Commun 2021
10
30

RNA-guided human genome engineering via Cas9.
Prashant Mali, Luhan Yang, Kevin M Esvelt, John Aach, Marc Guell, James E DiCarlo, Julie E Norville, George M Church. Science 2013
21

A CRISPR-Cas9 System for Genetic Engineering of Filamentous Fungi.
Christina S Nødvig, Jakob B Nielsen, Martin E Kogle, Uffe H Mortensen. PLoS One 2015
313
21

Mapping the genetic landscape of DNA double-strand break repair.
Jeffrey A Hussmann, Jia Ling, Purnima Ravisankar, Jun Yan, Ann Cirincione, Albert Xu, Danny Simpson, Dian Yang, Anne Bothmer, Cecilia Cotta-Ramusino,[...]. Cell 2021
29
14

Chromothripsis as an on-target consequence of CRISPR-Cas9 genome editing.
Mitchell L Leibowitz, Stamatis Papathanasiou, Phillip A Doerfler, Logan J Blaine, Lili Sun, Yu Yao, Cheng-Zhong Zhang, Mitchell J Weiss, David Pellman. Nat Genet 2021
108
14

Genetic screens in human cells using the CRISPR-Cas9 system.
Tim Wang, Jenny J Wei, David M Sabatini, Eric S Lander. Science 2014
14

Crystal structure of Cas9 in complex with guide RNA and target DNA.
Hiroshi Nishimasu, F Ann Ran, Patrick D Hsu, Silvana Konermann, Soraya I Shehata, Naoshi Dohmae, Ryuichiro Ishitani, Feng Zhang, Osamu Nureki. Cell 2014
14

Cas9-crRNA ribonucleoprotein complex mediates specific DNA cleavage for adaptive immunity in bacteria.
Giedrius Gasiunas, Rodolphe Barrangou, Philippe Horvath, Virginijus Siksnys. Proc Natl Acad Sci U S A 2012
14

Microhomology-mediated End Joining and Homologous Recombination share the initial end resection step to repair DNA double-strand breaks in mammalian cells.
Lan N Truong, Yongjiang Li, Linda Z Shi, Patty Yi-Hwa Hwang, Jing He, Hailong Wang, Niema Razavian, Michael W Berns, Xiaohua Wu. Proc Natl Acad Sci U S A 2013
292
14


High-fidelity CRISPR-Cas9 nucleases with no detectable genome-wide off-target effects.
Benjamin P Kleinstiver, Vikram Pattanayak, Michelle S Prew, Shengdar Q Tsai, Nhu T Nguyen, Zongli Zheng, J Keith Joung. Nature 2016
14

GUIDE-seq enables genome-wide profiling of off-target cleavage by CRISPR-Cas nucleases.
Shengdar Q Tsai, Zongli Zheng, Nhu T Nguyen, Matthew Liebers, Ved V Topkar, Vishal Thapar, Nicolas Wyvekens, Cyd Khayter, A John Iafrate, Long P Le,[...]. Nat Biotechnol 2015
14

Microhomology-Mediated End Joining: A Back-up Survival Mechanism or Dedicated Pathway?
Agnel Sfeir, Lorraine S Symington. Trends Biochem Sci 2015
316
14

Enhanced prime editing systems by manipulating cellular determinants of editing outcomes.
Peter J Chen, Jeffrey A Hussmann, Jun Yan, Friederike Knipping, Purnima Ravisankar, Pin-Fang Chen, Cidi Chen, James W Nelson, Gregory A Newby, Mustafa Sahin,[...]. Cell 2021
83
14

A high-fidelity Cas9 mutant delivered as a ribonucleoprotein complex enables efficient gene editing in human hematopoietic stem and progenitor cells.
Christopher A Vakulskas, Daniel P Dever, Garrett R Rettig, Rolf Turk, Ashley M Jacobi, Michael A Collingwood, Nicole M Bode, Matthew S McNeill, Shuqi Yan, Joab Camarena,[...]. Nat Med 2018
355
14

The next generation of CRISPR-Cas technologies and applications.
Adrian Pickar-Oliver, Charles A Gersbach. Nat Rev Mol Cell Biol 2019
511
14

Large-Fragment Deletions Induced by Cas9 Cleavage while Not in the BEs System.
Yuning Song, Zhiquan Liu, Yuxin Zhang, Mao Chen, Tingting Sui, Liangxue Lai, Zhanjun Li. Mol Ther Nucleic Acids 2020
17
14

Molecular safeguarding of CRISPR gene drive experiments.
Jackson Champer, Joan Chung, Yoo Lim Lee, Chen Liu, Emily Yang, Zhaoxin Wen, Andrew G Clark, Philipp W Messer. Elife 2019
51
14

Germline Cas9 expression yields highly efficient genome engineering in a major worldwide disease vector, Aedes aegypti.
Ming Li, Michelle Bui, Ting Yang, Christian S Bowman, Bradley J White, Omar S Akbari. Proc Natl Acad Sci U S A 2017
88
14

Considerations for homology-based DNA repair in mosquitoes: Impact of sequence heterology and donor template source.
Joshua Xin De Ang, Katherine Nevard, Rebekah Ireland, Deepak-Kumar Purusothaman, Sebald A N Verkuijl, Lewis Shackleford, Estela Gonzalez, Michelle A E Anderson, Luke Alphey. PLoS Genet 2022
3
66

Super-Mendelian inheritance mediated by CRISPR-Cas9 in the female mouse germline.
Hannah A Grunwald, Valentino M Gantz, Gunnar Poplawski, Xiang-Ru S Xu, Ethan Bier, Kimberly L Cooper. Nature 2019
111
14

Efficient population modification gene-drive rescue system in the malaria mosquito Anopheles stephensi.
Adriana Adolfi, Valentino M Gantz, Nijole Jasinskiene, Hsu-Feng Lee, Kristy Hwang, Gerard Terradas, Emily A Bulger, Arunachalam Ramaiah, Jared B Bennett, J J Emerson,[...]. Nat Commun 2020
53
14

Chemically modified guide RNAs enhance CRISPR-Cas genome editing in human primary cells.
Ayal Hendel, Rasmus O Bak, Joseph T Clark, Andrew B Kennedy, Daniel E Ryan, Subhadeep Roy, Israel Steinfeld, Benjamin D Lunstad, Robert J Kaiser, Alec B Wilkens,[...]. Nat Biotechnol 2015
605
14

Assessment of a Split Homing Based Gene Drive for Efficient Knockout of Multiple Genes.
Nikolay P Kandul, Junru Liu, Anna Buchman, Valentino M Gantz, Ethan Bier, Omar S Akbari. G3 (Bethesda) 2020
38
14

Optimising homing endonuclease gene drive performance in a semi-refractory species: the Drosophila melanogaster experience.
Yuk-Sang Chan, David S Huen, Ruth Glauert, Eleanor Whiteway, Steven Russell. PLoS One 2013
35
14


Meiotic Cas9 expression mediates gene conversion in the male and female mouse germline.
Alexander J Weitzel, Hannah A Grunwald, Ceri Weber, Rimma Levina, Valentino M Gantz, Stephen M Hedrick, Ethan Bier, Kimberly L Cooper. PLoS Biol 2021
10
20

A CRISPR-Cas9 gene drive targeting doublesex causes complete population suppression in caged Anopheles gambiae mosquitoes.
Kyros Kyrou, Andrew M Hammond, Roberto Galizi, Nace Kranjc, Austin Burt, Andrea K Beaghton, Tony Nolan, Andrea Crisanti. Nat Biotechnol 2018
325
14


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.