A citation-based method for searching scientific literature


List of co-cited articles
1 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


High-throughput deep sequencing reveals the important role that microRNAs play in the salt response in sweet potato (Ipomoea batatas L.).
Zhengmei Yang, Panpan Zhu, Hunseung Kang, Lin Liu, Qinghe Cao, Jian Sun, Tingting Dong, Mingku Zhu, Zongyun Li, Tao Xu. BMC Genomics 2020
19
100


Comparative genome and phenotypic analysis of three Clostridioides difficile strains isolated from a single patient provide insight into multiple infection of C. difficile.
Uwe Groß, Elzbieta Brzuszkiewicz, Katrin Gunka, Jessica Starke, Thomas Riedel, Boyke Bunk, Cathrin Spröer, Daniela Wetzel, Anja Poehlein, Cynthia Chibani,[...]. BMC Genomics 2018
126
50

Comparative analysis of mitochondrial genomes between a wheat K-type cytoplasmic male sterility (CMS) line and its maintainer line.
Huitao Liu, Peng Cui, Kehui Zhan, Qiang Lin, Guoyin Zhuo, Xiaoli Guo, Feng Ding, Wenlong Yang, Dongcheng Liu, Songnian Hu,[...]. BMC Genomics 2011
39
50


RNA Editing and Its Molecular Mechanism in Plant Organelles.
Mizuho Ichinose, Mamoru Sugita. Genes (Basel) 2016
88
50




Sequencing DNA with nanopores: Troubles and biases.
Clara Delahaye, Jacques Nicolas. PLoS One 2021
16
50

MISA-web: a web server for microsatellite prediction.
Sebastian Beier, Thomas Thiel, Thomas Münch, Uwe Scholz, Martin Mascher. Bioinformatics 2017
431
50


Haplotype-resolved sweet potato genome traces back its hexaploidization history.
Jun Yang, M-Hossein Moeinzadeh, Heiner Kuhl, Johannes Helmuth, Peng Xiao, Stefan Haas, Guiling Liu, Jianli Zheng, Zhe Sun, Weijuan Fan,[...]. Nat Plants 2017
97
50


Gepard: a rapid and sensitive tool for creating dotplots on genome scale.
Jan Krumsiek, Roland Arnold, Thomas Rattei. Bioinformatics 2007
421
50

High throughput deep sequencing reveals the important roles of microRNAs during sweetpotato storage at chilling temperature.
Zeyi Xie, Aiming Wang, Hongmin Li, Jingjing Yu, Jiaojiao Jiang, Zhonghou Tang, Daifu Ma, Baohong Zhang, Yonghua Han, Zongyun Li. Sci Rep 2017
15
50

The alternative reality of plant mitochondrial DNA: One ring does not rule them all.
Alexander Kozik, Beth A Rowan, Dean Lavelle, Lidija Berke, M Eric Schranz, Richard W Michelmore, Alan C Christensen. PLoS Genet 2019
67
50

Transgenic induction of mitochondrial rearrangements for cytoplasmic male sterility in crop plants.
Ajay Pal S Sandhu, Ricardo V Abdelnoor, Sally A Mackenzie. Proc Natl Acad Sci U S A 2007
61
50

Using Apollo to browse and edit genome annotations.
Sima Misra, Nomi Harris. Curr Protoc Bioinformatics 2006
24
50

Microsatellites are preferentially associated with nonrepetitive DNA in plant genomes.
Michele Morgante, Michael Hanafey, Wayne Powell. Nat Genet 2002
527
50

Apollo: a sequence annotation editor.
S E Lewis, S M J Searle, N Harris, M Gibson, V Lyer, J Richter, C Wiel, L Bayraktaroglu, E Birney, M A Crosby,[...]. Genome Biol 2002
264
50

In situ and in vitro antioxidant activity of sweetpotato anthocyanins.
Martin Philpott, Kevin S Gould, Chiara Lim, Lynnette R Ferguson. J Agric Food Chem 2004
47
50

REDItools: high-throughput RNA editing detection made easy.
Ernesto Picardi, Graziano Pesole. Bioinformatics 2013
146
50

Gene selection and classification for cancer microarray data based on machine learning and similarity measures.
Qingzhong Liu, Andrew H Sung, Zhongxue Chen, Jianzhong Liu, Lei Chen, Mengyu Qiao, Zhaohui Wang, Xudong Huang, Youping Deng. BMC Genomics 2011
43
50


Assembly and comparative analysis of complete mitochondrial genome sequence of an economic plant Salix suchowensis.
Ning Ye, Xuelin Wang, Juan Li, Changwei Bi, Yiqing Xu, Dongyang Wu, Qiaolin Ye. PeerJ 2017
21
50

MRBAYES: Bayesian inference of phylogenetic trees.
J P Huelsenbeck, F Ronquist. Bioinformatics 2001
50

Evolution and Diversification of Kiwifruit Mitogenomes through Extensive Whole-Genome Rearrangement and Mosaic Loss of Intergenic Sequences in a Highly Variable Region.
Shuaibin Wang, Dawei Li, Xiaohong Yao, Qingwei Song, Zupeng Wang, Qiong Zhang, Caihong Zhong, Yifei Liu, Hongwen Huang. Genome Biol Evol 2019
10
50

CPGAVAS2, an integrated plastome sequence annotator and analyzer.
Linchun Shi, Haimei Chen, Mei Jiang, Liqiang Wang, Xi Wu, Linfang Huang, Chang Liu. Nucleic Acids Res 2019
260
50

Ror2 signaling regulates Golgi structure and transport through IFT20 for tumor invasiveness.
Michiru Nishita, Seung-Yeol Park, Tadashi Nishio, Koki Kamizaki, ZhiChao Wang, Kota Tamada, Toru Takumi, Ryuju Hashimoto, Hiroki Otani, Gregory J Pazour,[...]. Sci Rep 2017
50

Mitochondrion role in molecular basis of cytoplasmic male sterility.
Renate Horn, Kapuganti J Gupta, Noemi Colombo. Mitochondrion 2014
81
50

Challenges to genome sequence dissection in sweetpotato.
Sachiko Isobe, Kenta Shirasawa, Hideki Hirakawa. Breed Sci 2017
13
50

GetOrganelle: a fast and versatile toolkit for accurate de novo assembly of organelle genomes.
Jian-Jun Jin, Wen-Bin Yu, Jun-Bo Yang, Yu Song, Claude W dePamphilis, Ting-Shuang Yi, De-Zhu Li. Genome Biol 2020
519
50


The complete mitochondrial genome of the early flowering plant Nymphaea colorata is highly repetitive with low recombination.
Shanshan Dong, Chaoxian Zhao, Fei Chen, Yanhui Liu, Shouzhou Zhang, Hong Wu, Liangsheng Zhang, Yang Liu. BMC Genomics 2018
34
50



Organelle Genomes and Transcriptomes of Nymphaea Reveal the Interplay between Intron Splicing and RNA Editing.
Zheng-Shan He, Andan Zhu, Jun-Bo Yang, Weishu Fan, De-Zhu Li. Int J Mol Sci 2021
3
50

scRNA-seq assessment of the human lung, spleen, and esophagus tissue stability after cold preservation.
E Madissoon, A Wilbrey-Clark, R J Miragaia, K Saeb-Parsy, K T Mahbubani, N Georgakopoulos, P Harding, K Polanski, N Huang, K Nowicki-Osuch,[...]. Genome Biol 2019
138
50

RNA editing sites exist in protein-coding genes in the chloroplast genome of Cycas taitungensis.
Haiyan Chen, Likun Deng, Yuan Jiang, Ping Lu, Jianing Yu. J Integr Plant Biol 2011
29
50

The cox1 initiation codon is created by RNA editing in potato mitochondria.
V Quiñones, S Zanlungo, L Holuigue, S Litvak, X Jordana. Plant Physiol 1995
15
50



PhyloSuite: An integrated and scalable desktop platform for streamlined molecular sequence data management and evolutionary phylogenetics studies.
Dong Zhang, Fangluan Gao, Ivan Jakovlić, Hong Zou, Jin Zhang, Wen X Li, Gui T Wang. Mol Ecol Resour 2020
528
50

GeSeq - versatile and accurate annotation of organelle genomes.
Michael Tillich, Pascal Lehwark, Tommaso Pellizzer, Elena S Ulbricht-Jones, Axel Fischer, Ralph Bock, Stephan Greiner. Nucleic Acids Res 2017
956
50


The Sequence Alignment/Map format and SAMtools.
Heng Li, Bob Handsaker, Alec Wysoker, Tim Fennell, Jue Ruan, Nils Homer, Gabor Marth, Goncalo Abecasis, Richard Durbin. Bioinformatics 2009
50

Assembly and comparative analysis of the complete mitochondrial genome of Suaeda glauca.
Yan Cheng, Xiaoxue He, S V G N Priyadarshani, Yu Wang, Li Ye, Chao Shi, Kangzhuo Ye, Qiao Zhou, Ziqiang Luo, Fang Deng,[...]. BMC Genomics 2021
9
50

Arabidopsis growth-regulating factor7 functions as a transcriptional repressor of abscisic acid- and osmotic stress-responsive genes, including DREB2A.
June-Sik Kim, Junya Mizoi, Satoshi Kidokoro, Kyonoshin Maruyama, Jun Nakajima, Kazuo Nakashima, Nobutaka Mitsuda, Yuko Takiguchi, Masaru Ohme-Takagi, Youichi Kondou,[...]. Plant Cell 2012
112
50

Identification and characterization of microRNAs related to salt stress in broccoli, using high-throughput sequencing and bioinformatics analysis.
Yunhong Tian, Yunming Tian, Xiaojun Luo, Tao Zhou, Zuoping Huang, Ying Liu, Yihan Qiu, Bing Hou, Dan Sun, Hongyu Deng,[...]. BMC Plant Biol 2014
29
50


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.