A citation-based method for searching scientific literature

Ruchi Lohia, Matthew E B Hansen, Grace Brannigan. Proc Natl Acad Sci U S A 2022
Times Cited: 1







List of co-cited articles
articles co-cited >1



Times Cited
  Times     Co-cited
Similarity




ALS/FTD Mutation-Induced Phase Transition of FUS Liquid Droplets and Reversible Hydrogels into Irreversible Hydrogels Impairs RNP Granule Function.
Tetsuro Murakami, Seema Qamar, Julie Qiaojin Lin, Gabriele S Kaminski Schierle, Eric Rees, Akinori Miyashita, Ana R Costa, Roger B Dodd, Fiona T S Chan, Claire H Michel,[...]. Neuron 2015
490
100

LASSI: A lattice model for simulating phase transitions of multivalent proteins.
Jeong-Mo Choi, Furqan Dar, Rohit V Pappu. PLoS Comput Biol 2019
131
100

Protein Network Structure Enables Switching between Liquid and Gel States.
Jeremy D Schmit, Jill J Bouchard, Erik W Martin, Tanja Mittag. J Am Chem Soc 2020
19
100

Valence and patterning of aromatic residues determine the phase behavior of prion-like domains.
Erik W Martin, Alex S Holehouse, Ivan Peran, Mina Farag, J Jeremias Incicco, Anne Bremer, Christy R Grace, Andrea Soranno, Rohit V Pappu, Tanja Mittag. Science 2020
272
100


VMD: visual molecular dynamics.
W Humphrey, A Dalke, K Schulten. J Mol Graph 1996
100

Biomolecular Condensates and Their Links to Cancer Progression.
Danfeng Cai, Zhe Liu, Jennifer Lippincott-Schwartz. Trends Biochem Sci 2021
23
100

Are aberrant phase transitions a driver of cellular aging?
Simon Alberti, Anthony A Hyman. Bioessays 2016
143
100

Liquid-liquid phase separation in human health and diseases.
Bin Wang, Lei Zhang, Tong Dai, Ziran Qin, Huasong Lu, Long Zhang, Fangfang Zhou. Signal Transduct Target Ther 2021
43
100

Combining graph and flux-based structures to decipher phenotypic essential metabolites within metabolic networks.
Julie Laniau, Clémence Frioux, Jacques Nicolas, Caroline Baroukh, Maria-Paz Cortes, Jeanne Got, Camille Trottier, Damien Eveillard, Anne Siegel. PeerJ 2017
4
100

Organization and Function of Non-dynamic Biomolecular Condensates.
Jeffrey B Woodruff, Anthony A Hyman, Elvan Boke. Trends Biochem Sci 2018
102
100

De novo engineering of intracellular condensates using artificial disordered proteins.
Michael Dzuricky, Bradley A Rogers, Abdulla Shahid, Paul S Cremer, Ashutosh Chilkoti. Nat Chem 2020
57
100

Biomolecular condensates in neurodegeneration and cancer.
Stephanie Spannl, Maria Tereshchenko, Giovanni J Mastromarco, Sean J Ihn, Hyun O Lee. Traffic 2019
29
100

Phase separation by the polyhomeotic sterile alpha motif compartmentalizes Polycomb Group proteins and enhances their activity.
Elias Seif, Jin Joo Kang, Charles Sasseville, Olga Senkovich, Alexander Kaltashov, Elodie L Boulier, Ibani Kapur, Chongwoo A Kim, Nicole J Francis. Nat Commun 2020
28
100

Biomolecular condensates: organizers of cellular biochemistry.
Salman F Banani, Hyun O Lee, Anthony A Hyman, Michael K Rosen. Nat Rev Mol Cell Biol 2017
100

Phase Separation in Biology & Disease: The next chapter.
Shana Elbaum-Garfinkle, Richard W Kriwacki. J Mol Biol 2021
2
100

The Interplay of Structural and Cellular Biophysics Controls Clustering of Multivalent Molecules.
Aniruddha Chattaraj, Madeleine Youngstrom, Leslie M Loew. Biophys J 2019
11
100


Exploring Allosteric Pathways of a V-Type Enzyme with Dynamical Perturbation Networks.
Aria Gheeraert, Lorenza Pacini, Victor S Batista, Laurent Vuillon, Claire Lesieur, Ivan Rivalta. J Phys Chem B 2019
16
100


Dynamics of associative polymers.
Zhijie Zhang, Quan Chen, Ralph H Colby. Soft Matter 2018
37
100

Phase separation provides a mechanism to reduce noise in cells.
A Klosin, F Oltsch, T Harmon, A Honigmann, F Jülicher, A A Hyman, C Zechner. Science 2020
104
100

Designer Condensates: A Toolkit for the Biomolecular Architect.
Renee L Hastings, Steven Boeynaems. J Mol Biol 2021
17
100

Perspective: Dissipative particle dynamics.
Pep Español, Patrick B Warren. J Chem Phys 2017
158
100

The physics of liquid-to-solid transitions in multi-domain protein condensates.
Srivastav Ranganathan, Eugene Shakhnovich. Biophys J 2022
2
100

Molecular structure in biomolecular condensates.
Ivan Peran, Tanja Mittag. Curr Opin Struct Biol 2020
51
100

Burstiness and aging in social temporal networks.
Antoine Moinet, Michele Starnini, Romualdo Pastor-Satorras. Phys Rev Lett 2015
26
100

Intrinsically disordered proteins and biomolecular condensates as drug targets.
Mateusz Biesaga, Marta Frigolé-Vivas, Xavier Salvatella. Curr Opin Chem Biol 2021
19
100

A guide to regulation of the formation of biomolecular condensates.
Anna Bratek-Skicki, Rita Pancsa, Balint Meszaros, Joris Van Lindt, Peter Tompa. FEBS J 2020
26
100


Motif-pattern dependence of biomolecular phase separation driven by specific interactions.
Benjamin G Weiner, Andrew G T Pyo, Yigal Meir, Ned S Wingreen. PLoS Comput Biol 2021
2
100

Intensity and coherence of motifs in weighted complex networks.
Jukka-Pekka Onnela, Jari Saramäki, János Kertész, Kimmo Kaski. Phys Rev E Stat Nonlin Soft Matter Phys 2005
401
100

The role of liquid-liquid phase separation in regulating enzyme activity.
Brian G O'Flynn, Tanja Mittag. Curr Opin Cell Biol 2021
31
100

Generalizations of the clustering coefficient to weighted complex networks.
Jari Saramäki, Mikko Kivelä, Jukka-Pekka Onnela, Kimmo Kaski, János Kertész. Phys Rev E Stat Nonlin Soft Matter Phys 2007
156
100

Sequence determinants of compaction in intrinsically disordered proteins.
Joseph A Marsh, Julie D Forman-Kay. Biophys J 2010
241
100



Phase Separation of Toxic Dipeptide Repeat Proteins Related to C9orf72 ALS/FTD.
Hamidreza Jafarinia, Erik van der Giessen, Patrick R Onck. Biophys J 2020
7
100

A time-varying group sparse additive model for genome-wide association studies of dynamic complex traits.
Micol Marchetti-Bowick, Junming Yin, Judie A Howrylak, Eric P Xing. Bioinformatics 2016
9
100


Minimal coarse-grained models for molecular self-organisation in biology.
Anne E Hafner, Johannes Krausser, Anđela Šarić. Curr Opin Struct Biol 2019
18
100

Accurate model of liquid-liquid phase behavior of intrinsically disordered proteins from optimization of single-chain properties.
Giulio Tesei, Thea K Schulze, Ramon Crehuet, Kresten Lindorff-Larsen. Proc Natl Acad Sci U S A 2021
26
100

A predictive coarse-grained model for position-specific effects of post-translational modifications.
Theodora Myrto Perdikari, Nina Jovic, Gregory L Dignon, Young C Kim, Nicolas L Fawzi, Jeetain Mittal. Biophys J 2021
24
100


Protein phase separation and its role in tumorigenesis.
Shan Jiang, Johan Bourghardt Fagman, Changyan Chen, Simon Alberti, Beidong Liu. Elife 2020
33
100

Physical Principles Underlying the Complex Biology of Intracellular Phase Transitions.
Jeong-Mo Choi, Alex S Holehouse, Rohit V Pappu. Annu Rev Biophys 2020
234
100

Reconstituted Postsynaptic Density as a Molecular Platform for Understanding Synapse Formation and Plasticity.
Menglong Zeng, Xudong Chen, Dongshi Guan, Jia Xu, Haowei Wu, Penger Tong, Mingjie Zhang. Cell 2018
169
100

The disordered P granule protein LAF-1 drives phase separation into droplets with tunable viscosity and dynamics.
Shana Elbaum-Garfinkle, Younghoon Kim, Krzysztof Szczepaniak, Carlos Chih-Hsiung Chen, Christian R Eckmann, Sua Myong, Clifford P Brangwynne. Proc Natl Acad Sci U S A 2015
605
100


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.