A citation-based method for searching scientific literature

Cameron L Noland, Han Chow Chua, Marc Kschonsak, Stephanie Andrea Heusser, Nina Braun, Timothy Chang, Christine Tam, Jia Tang, Christopher P Arthur, Claudio Ciferri, Stephan Alexander Pless, Jian Payandeh. Nat Commun 2022
Times Cited: 1







List of co-cited articles
articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Intrapore lipids hydrophobically gate pannexin-1 channels.
Connor L Anderson, Roger J Thompson. Sci Signal 2022
2
100

Conformational transitions and ligand-binding to a muscle-type nicotinic acetylcholine receptor.
Eleftherios Zarkadas, Eva Pebay-Peyroula, Mackenzie John Thompson, Guy Schoehn, Tomasz Uchański, Jan Steyaert, Christophe Chipot, Francois Dehez, John Edward Baenziger, Hugues Nury. Neuron 2022
9
100

Physical mechanism for gating and mechanosensitivity of the human TRAAK K+ channel.
Stephen G Brohawn, Ernest B Campbell, Roderick MacKinnon. Nature 2014
187
100

Crystal structure of the human two-pore domain potassium channel K2P1.
Alexandria N Miller, Stephen B Long. Science 2012
219
100


Molecular basis of force-from-lipids gating in the mechanosensitive channel MscS.
Bharat Reddy, Navid Bavi, Allen Lu, Yeonwoo Park, Eduardo Perozo. Elife 2019
47
100

X-ray structure of a pentameric ligand-gated ion channel in an apparently open conformation.
Nicolas Bocquet, Hugues Nury, Marc Baaden, Chantal Le Poupon, Jean-Pierre Changeux, Marc Delarue, Pierre-Jean Corringer. Nature 2009
556
100

Voltage Gating of a Biomimetic Nanopore: Electrowetting of a Hydrophobic Barrier.
Jemma L Trick, Chen Song, E Jayne Wallace, Mark S P Sansom. ACS Nano 2017
26
100

Mechanisms of activation and desensitization of full-length glycine receptor in lipid nanodiscs.
Arvind Kumar, Sandip Basak, Shanlin Rao, Yvonne Gicheru, Megan L Mayer, Mark S P Sansom, Sudha Chakrapani. Nat Commun 2020
38
100

Hydrophobic pore gates regulate ion permeation in polycystic kidney disease 2 and 2L1 channels.
Wang Zheng, Xiaoyong Yang, Ruikun Hu, Ruiqi Cai, Laura Hofmann, Zhifei Wang, Qiaolin Hu, Xiong Liu, David Bulkley, Yong Yu,[...]. Nat Commun 2018
35
100

An Ion-Permeable State of the Glycine Receptor Captured by Molecular Dynamics.
Adrien Henri Cerdan, Nicolas Éric Martin, Marco Cecchini. Structure 2018
22
100

Opening of glutamate receptor channel to subconductance levels.
Maria V Yelshanskaya, Dhilon S Patel, Christopher M Kottke, Maria G Kurnikova, Alexander I Sobolevsky. Nature 2022
4
100

Hydrophobic dewetting in gating and regulation of transmembrane protein ion channels.
Mahdieh Yazdani, Zhiguang Jia, Jianhan Chen. J Chem Phys 2020
9
100


Bubbles, gating, and anesthetics in ion channels.
Roland Roth, Dirk Gillespie, Wolfgang Nonner, Robert E Eisenberg. Biophys J 2008
57
100

Domain organization of the MscS mechanosensitive channel of Escherichia coli.
Samantha Miller, Wendy Bartlett, Subramanian Chandrasekaran, Sally Simpson, Michelle Edwards, Ian R Booth. EMBO J 2003
90
100


The structure of an open form of an E. coli mechanosensitive channel at 3.45 A resolution.
Wenjian Wang, Susan S Black, Michelle D Edwards, Samantha Miller, Emma L Morrison, Wendy Bartlett, Changjiang Dong, James H Naismith, Ian R Booth. Science 2008
156
100

Water conduction through the hydrophobic channel of a carbon nanotube.
G Hummer, J C Rasaiah, J P Noworyta. Nature 2001
100

Ion Channel Sensing: Are Fluctuations the Crux of the Matter?
Marina A Kasimova, Aysenur Yazici, Yevgen Yudin, Daniele Granata, Michael L Klein, Tibor Rohacs, Vincenzo Carnevale. J Phys Chem Lett 2018
23
100

Hydrophobic gating in ion channels.
Prafulla Aryal, Mark S P Sansom, Stephen J Tucker. J Mol Biol 2015
158
100

CHAP: A Versatile Tool for the Structural and Functional Annotation of Ion Channel Pores.
Gianni Klesse, Shanlin Rao, Mark S P Sansom, Stephen J Tucker. J Mol Biol 2019
50
100


Structures of human pannexin-1 in nanodiscs reveal gating mediated by dynamic movement of the N terminus and phospholipids.
Maki Kuzuya, Hidemi Hirano, Kenichi Hayashida, Masakatsu Watanabe, Kazumi Kobayashi, Tohru Terada, Md Iqbal Mahmood, Florence Tama, Kazutoshi Tani, Yoshinori Fujiyoshi,[...]. Sci Signal 2022
6
100

Structure and assembly of calcium homeostasis modulator proteins.
Johanna L Syrjanen, Kevin Michalski, Tsung-Han Chou, Timothy Grant, Shanlin Rao, Noriko Simorowski, Stephen J Tucker, Nikolaus Grigorieff, Hiro Furukawa. Nat Struct Mol Biol 2020
34
100

Crystal structure of Escherichia coli MscS, a voltage-modulated and mechanosensitive channel.
Randal B Bass, Pavel Strop, Margaret Barclay, Douglas C Rees. Science 2002
448
100

Hydration properties of mechanosensitive channel pores define the energetics of gating.
A Anishkin, B Akitake, K Kamaraju, C-S Chiang, S Sukharev. J Phys Condens Matter 2010
49
100

Progress in nicotinic receptor structural biology.
Anant Gharpure, Colleen M Noviello, Ryan E Hibbs. Neuropharmacology 2020
32
100

A heuristic derived from analysis of the ion channel structural proteome permits the rapid identification of hydrophobic gates.
Shanlin Rao, Gianni Klesse, Phillip J Stansfeld, Stephen J Tucker, Mark S P Sansom. Proc Natl Acad Sci U S A 2019
28
100

Key roles of hydrophobic rings of TM2 in gating of the alpha9alpha10 nicotinic cholinergic receptor.
Paola V Plazas, María J De Rosa, María E Gomez-Casati, Miguel Verbitsky, Noelia Weisstaub, Eleonora Katz, Cecilia Bouzat, Ana Belén Elgoyhen. Br J Pharmacol 2005
18
100

Hydrophobic gating in BK channels.
Zhiguang Jia, Mahdieh Yazdani, Guohui Zhang, Jianmin Cui, Jianhan Chen. Nat Commun 2018
37
100


Hydrophobic Gating of Ion Permeation in Magnesium Channel CorA.
Chris Neale, Nilmadhab Chakrabarti, Pawel Pomorski, Emil F Pai, Régis Pomès. PLoS Comput Biol 2015
29
100

Water Nanoconfined in a Hydrophobic Pore: Molecular Dynamics Simulations of Transmembrane Protein 175 and the Influence of Water Models.
Charlotte I Lynch, Gianni Klesse, Shanlin Rao, Stephen J Tucker, Mark S P Sansom. ACS Nano 2021
4
100

Influence of lipids on the hydrophobic barrier within the pore of the TWIK-1 K2P channel.
Prafulla Aryal, Firdaus Abd-Wahab, Giovanna Bucci, Mark S P Sansom, Stephen J Tucker. Channels (Austin) 2015
17
100

Principles of conduction and hydrophobic gating in K+ channels.
Morten Ø Jensen, David W Borhani, Kresten Lindorff-Larsen, Paul Maragakis, Vishwanath Jogini, Michael P Eastwood, Ron O Dror, David E Shaw. Proc Natl Acad Sci U S A 2010
220
100

Liquid-vapor oscillations of water in hydrophobic nanopores.
Oliver Beckstein, Mark S P Sansom. Proc Natl Acad Sci U S A 2003
282
100

STIM1 activates CRAC channels through rotation of the pore helix to open a hydrophobic gate.
Megumi Yamashita, Priscilla S-W Yeung, Christopher E Ing, Beth A McNally, Régis Pomès, Murali Prakriya. Nat Commun 2017
61
100

Computational electrophysiology: the molecular dynamics of ion channel permeation and selectivity in atomistic detail.
Carsten Kutzner, Helmut Grubmüller, Bert L de Groot, Ulrich Zachariae. Biophys J 2011
130
100

A BEST example of channel structure annotation by molecular simulation.
Shanlin Rao, Gianni Klesse, Phillip J Stansfeld, Stephen J Tucker, Mark S P Sansom. Channels (Austin) 2017
15
100

Induced Polarization in Molecular Dynamics Simulations of the 5-HT3 Receptor Channel.
Gianni Klesse, Shanlin Rao, Stephen J Tucker, Mark S P Sansom. J Am Chem Soc 2020
21
100

HOLE: a program for the analysis of the pore dimensions of ion channel structural models.
O S Smart, J G Neduvelil, X Wang, B A Wallace, M S Sansom. J Mol Graph 1996
100

A Gating Mechanism of the Serotonin 5-HT3 Receptor.
Shuguang Yuan, Slawomir Filipek, Horst Vogel. Structure 2016
32
100

Ion currents through Kir potassium channels are gated by anionic lipids.
Ruitao Jin, Sitong He, Katrina A Black, Oliver B Clarke, Di Wu, Jani R Bolla, Paul Johnson, Agalya Periasamy, Ahmad Wardak, Peter Czabotar,[...]. Nat Commun 2022
3
100

The voltage-dependence of MscL has dipolar and dielectric contributions and is governed by local intramembrane electric field.
Joseph S Najem, Ian Rowe, Andriy Anishkin, Donald J Leo, Sergei Sukharev. Sci Rep 2018
4
100


Electrostatic gating of a nanometer water channel.
Jingyuan Li, Xiaojing Gong, Hangjun Lu, Ding Li, Haiping Fang, Ruhong Zhou. Proc Natl Acad Sci U S A 2007
148
100

Cryo-EM structures and functional properties of CALHM channels of the human placenta.
Katarzyna Drożdżyk, Marta Sawicka, Maria-Isabel Bahamonde-Santos, Zaugg Jonas, Dawid Deneka, Christiane Albrecht, Raimund Dutzler. Elife 2020
13
100

A hydrophobic barrier deep within the inner pore of the TWIK-1 K2P potassium channel.
Prafulla Aryal, Firdaus Abd-Wahab, Giovanna Bucci, Mark S P Sansom, Stephen J Tucker. Nat Commun 2014
82
100

Highly accurate protein structure prediction with AlphaFold.
John Jumper, Richard Evans, Alexander Pritzel, Tim Green, Michael Figurnov, Olaf Ronneberger, Kathryn Tunyasuvunakool, Russ Bates, Augustin Žídek, Anna Potapenko,[...]. Nature 2021
100


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.