A citation-based method for searching scientific literature

Eugene Y D Chua, Joshua H Mendez, Micah Rapp, Serban L Ilca, Yong Zi Tan, Kashyap Maruthi, Huihui Kuang, Christina M Zimanyi, Anchi Cheng, Edward T Eng, Alex J Noble, Clinton S Potter, Bridget Carragher. Annu Rev Biochem 2022
Times Cited: 1







List of co-cited articles
articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Molecular architecture of the human 17S U2 snRNP.
Zhenwei Zhang, Cindy L Will, Karl Bertram, Olexandr Dybkov, Klaus Hartmuth, Dmitry E Agafonov, Romina Hofele, Henning Urlaub, Berthold Kastner, Reinhard Lührmann,[...]. Nature 2020
30
100

Splicing promotes rapid and efficient mRNA export in mammalian cells.
Patricia Valencia, Anusha P Dias, Robin Reed. Proc Natl Acad Sci U S A 2008
159
100

Structural basis of branch site recognition by the human spliceosome.
Jonas Tholen, Michal Razew, Felix Weis, Wojciech P Galej. Science 2022
3
100

Structural basis of transcription initiation by RNA polymerase II.
Sarah Sainsbury, Carrie Bernecky, Patrick Cramer. Nat Rev Mol Cell Biol 2015
219
100

A general two-metal-ion mechanism for catalytic RNA.
T A Steitz, J A Steitz. Proc Natl Acad Sci U S A 1993
901
100


Structural basis of Integrator-mediated transcription regulation.
Isaac Fianu, Ying Chen, Christian Dienemann, Olexandr Dybkov, Andreas Linden, Henning Urlaub, Patrick Cramer. Science 2021
19
100

Structural basis of intron selection by U2 snRNP in the presence of covalent inhibitors.
Constantin Cretu, Patricia Gee, Xiang Liu, Anant Agrawal, Tuong-Vi Nguyen, Arun K Ghosh, Andrew Cook, Melissa Jurica, Nicholas A Larsen, Vladimir Pena. Nat Commun 2021
8
100

Structural Basis of Nuclear pre-mRNA Splicing: Lessons from Yeast.
Clemens Plaschka, Andrew J Newman, Kiyoshi Nagai. Cold Spring Harb Perspect Biol 2019
39
100

How cells get the message: dynamic assembly and function of mRNA-protein complexes.
Michaela Müller-McNicoll, Karla M Neugebauer. Nat Rev Genet 2013
256
100

Enzymology of RNA cap synthesis.
Agnidipta Ghosh, Christopher D Lima. Wiley Interdiscip Rev RNA 2010
97
100

Integrator is a genome-wide attenuator of non-productive transcription.
Søren Lykke-Andersen, Kristina Žumer, Ewa Šmidová Molska, Jérôme O Rouvière, Guifen Wu, Carina Demel, Björn Schwalb, Manfred Schmid, Patrick Cramer, Torben Heick Jensen. Mol Cell 2021
30
100

Structural Insights into Nuclear pre-mRNA Splicing in Higher Eukaryotes.
Berthold Kastner, Cindy L Will, Holger Stark, Reinhard Lührmann. Cold Spring Harb Perspect Biol 2019
85
100

Structure of an active human histone pre-mRNA 3'-end processing machinery.
Yadong Sun, Yixiao Zhang, Wei Shen Aik, Xiao-Cui Yang, William F Marzluff, Thomas Walz, Zbigniew Dominski, Liang Tong. Science 2020
35
100

Prespliceosome structure provides insights into spliceosome assembly and regulation.
Clemens Plaschka, Pei-Chun Lin, Clément Charenton, Kiyoshi Nagai. Nature 2018
70
100

New tools for automated cryo-EM single-particle analysis in RELION-4.0.
Dari Kimanius, Liyi Dong, Grigory Sharov, Takanori Nakane, Sjors H W Scheres. Biochem J 2021
46
100

Structural Insights into the Human Pre-mRNA 3'-End Processing Machinery.
Yixiao Zhang, Yadong Sun, Yongsheng Shi, Thomas Walz, Liang Tong. Mol Cell 2020
25
100

Minor spliceosome and disease.
Bhupendra Verma, Maureen V Akinyi, Antto J Norppa, Mikko J Frilander. Semin Cell Dev Biol 2018
54
100

Reconstitution of 3' end processing of mammalian pre-mRNA reveals a central role of RBBP6.
Moritz Schmidt, Florian Kluge, Felix Sandmeir, Uwe Kühn, Peter Schäfer, Christian Tüting, Christian Ihling, Elena Conti, Elmar Wahle. Genes Dev 2022
9
100

Human protein-coding genes and gene feature statistics in 2019.
Allison Piovesan, Francesca Antonaros, Lorenza Vitale, Pierluigi Strippoli, Maria Chiara Pelleri, Maria Caracausi. BMC Res Notes 2019
50
100

Structural insights into the nucleic acid remodeling mechanisms of the yeast THO-Sub2 complex.
Sandra K Schuller, Jan M Schuller, J Rajan Prabu, Marc Baumgärtner, Fabien Bonneau, Jérôme Basquin, Elena Conti. Elife 2020
8
100

Integrator, a multiprotein mediator of small nuclear RNA processing, associates with the C-terminal repeat of RNA polymerase II.
David Baillat, Mohamed-Ali Hakimi, Anders M Näär, Ali Shilatifard, Neil Cooch, Ramin Shiekhattar. Cell 2005
330
100

The Clothes Make the mRNA: Past and Present Trends in mRNP Fashion.
Guramrit Singh, Gabriel Pratt, Gene W Yeo, Melissa J Moore. Annu Rev Biochem 2015
231
100

Structure of a transcribing RNA polymerase II-DSIF complex reveals a multidentate DNA-RNA clamp.
Carrie Bernecky, Jürgen M Plitzko, Patrick Cramer. Nat Struct Mol Biol 2017
81
100

Structure of the Saccharomyces cerevisiae Cet1-Ceg1 mRNA capping apparatus.
Meigang Gu, Kanagalaghatta R Rajashankar, Christopher D Lima. Structure 2010
27
100

Molecular Basis for poly(A) RNP Architecture and Recognition by the Pan2-Pan3 Deadenylase.
Ingmar B Schäfer, Masami Yamashita, Jan Michael Schuller, Steffen Schüssler, Peter Reichelt, Mike Strauss, Elena Conti. Cell 2019
30
100

Structure of activated transcription complex Pol II-DSIF-PAF-SPT6.
Seychelle M Vos, Lucas Farnung, Marc Boehning, Christoph Wigge, Andreas Linden, Henning Urlaub, Patrick Cramer. Nature 2018
183
100

Activation of the Endonuclease that Defines mRNA 3' Ends Requires Incorporation into an 8-Subunit Core Cleavage and Polyadenylation Factor Complex.
Chris H Hill, Vytautė Boreikaitė, Ananthanarayanan Kumar, Ana Casañal, Peter Kubík, Gianluca Degliesposti, Sarah Maslen, Angelica Mariani, Ottilie von Loeffelholz, Mathias Girbig,[...]. Mol Cell 2019
43
100

RNA Splicing by the Spliceosome.
Max E Wilkinson, Clément Charenton, Kiyoshi Nagai. Annu Rev Biochem 2020
173
100

RNA catalyses nuclear pre-mRNA splicing.
Sebastian M Fica, Nicole Tuttle, Thaddeus Novak, Nan-Sheng Li, Jun Lu, Prakash Koodathingal, Qing Dai, Jonathan P Staley, Joseph A Piccirilli. Nature 2013
218
100

Small ribonucleoproteins from eukaryotes: structures and roles in RNA biogenesis.
J A Steitz, S L Wolin, J Rinke, I Pettersson, S M Mount, E A Lerner, M Hinterberger, E Gottlieb. Cold Spring Harb Symp Quant Biol 1983
55
100


Structural analysis of human ARS2 as a platform for co-transcriptional RNA sorting.
Wiebke Manuela Schulze, Frank Stein, Mandy Rettel, Max Nanao, Stephen Cusack. Nat Commun 2018
31
100

Human mRNA export machinery recruited to the 5' end of mRNA.
Hong Cheng, Kobina Dufu, Chung-Sheng Lee, Jeanne L Hsu, Anusha Dias, Robin Reed. Cell 2006
329
100

Assembly of RNA polymerase II transcription initiation complexes.
Lucas Farnung, Seychelle M Vos. Curr Opin Struct Biol 2022
3
100

Splicing Kinetics and Coordination Revealed by Direct Nascent RNA Sequencing through Nanopores.
Heather L Drexler, Karine Choquet, L Stirling Churchman. Mol Cell 2020
75
100



Structure and function of poly(A) binding proteins.
Uwe Kühn, Elmar Wahle. Biochim Biophys Acta 2004
238
100

Structure of paused transcription complex Pol II-DSIF-NELF.
Seychelle M Vos, Lucas Farnung, Henning Urlaub, Patrick Cramer. Nature 2018
153
100

R loops: from transcription byproducts to threats to genome stability.
Andrés Aguilera, Tatiana García-Muse. Mol Cell 2012
617
100

Molecular Basis of Transcription-Coupled Pre-mRNA Capping.
Fuensanta W Martinez-Rucobo, Rebecca Kohler, Michiel van de Waterbeemd, Albert J R Heck, Matthias Hemann, Franz Herzog, Holger Stark, Patrick Cramer. Mol Cell 2015
73
100


DeepEMhancer: a deep learning solution for cryo-EM volume post-processing.
Ruben Sanchez-Garcia, Josue Gomez-Blanco, Ana Cuervo, Jose Maria Carazo, Carlos Oscar S Sorzano, Javier Vargas. Commun Biol 2021
167
100

Nascent RNA and the Coordination of Splicing with Transcription.
Karla M Neugebauer. Cold Spring Harb Perspect Biol 2019
36
100

Structural basis of AAUAAA polyadenylation signal recognition by the human CPSF complex.
Marcello Clerici, Marco Faini, Lena M Muckenfuss, Ruedi Aebersold, Martin Jinek. Nat Struct Mol Biol 2018
58
100

Genome-wide Single-Molecule Footprinting Reveals High RNA Polymerase II Turnover at Paused Promoters.
Arnaud R Krebs, Dilek Imanci, Leslie Hoerner, Dimos Gaidatzis, Lukas Burger, Dirk Schübeler. Mol Cell 2017
94
100

RBBP6 activates the pre-mRNA 3' end processing machinery in humans.
Vytaute Boreikaite, Thomas S Elliott, Jason W Chin, Lori A Passmore. Genes Dev 2022
11
100

Structural insights into how Prp5 proofreads the pre-mRNA branch site.
Zhenwei Zhang, Norbert Rigo, Olexandr Dybkov, Jean-Baptiste Fourmann, Cindy L Will, Vinay Kumar, Henning Urlaub, Holger Stark, Reinhard Lührmann. Nature 2021
7
100

Structure of a transcribing RNA polymerase II-U1 snRNP complex.
Suyang Zhang, Shintaro Aibara, Seychelle M Vos, Dmitry E Agafonov, Reinhard Lührmann, Patrick Cramer. Science 2021
32
100


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.