A citation-based method for searching scientific literature

Yun Shi, Philip S Kerry, Jeffrey D Nanson, Todd Bosanac, Yo Sasaki, Raul Krauss, Forhad K Saikot, Sarah E Adams, Tamim Mosaiab, Veronika Masic, Xianrong Mao, Faith Rose, Eduardo Vasquez, Marieke Furrer, Katie Cunnea, Andrew Brearley, Weixi Gu, Zhenyao Luo, Lou Brillault, Michael J Landsberg, Aaron DiAntonio, Bostjan Kobe, Jeffrey Milbrandt, Robert O Hughes, Thomas Ve. Mol Cell 2022
Times Cited: 8







List of co-cited articles
91 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


The SARM1 Toll/Interleukin-1 Receptor Domain Possesses Intrinsic NAD+ Cleavage Activity that Promotes Pathological Axonal Degeneration.
Kow Essuman, Daniel W Summers, Yo Sasaki, Xianrong Mao, Aaron DiAntonio, Jeffrey Milbrandt. Neuron 2017
284
75

SARM1 is a metabolic sensor activated by an increased NMN/NAD+ ratio to trigger axon degeneration.
Matthew D Figley, Weixi Gu, Jeffrey D Nanson, Yun Shi, Yo Sasaki, Katie Cunnea, Alpeshkumar K Malde, Xinying Jia, Zhenyao Luo, Forhad K Saikot,[...]. Neuron 2021
72
75

TIR Domain Proteins Are an Ancient Family of NAD+-Consuming Enzymes.
Kow Essuman, Daniel W Summers, Yo Sasaki, Xianrong Mao, Aldrin Kay Yuen Yim, Aaron DiAntonio, Jeffrey Milbrandt. Curr Biol 2018
117
75

Structure of the activated ROQ1 resistosome directly recognizing the pathogen effector XopQ.
Raoul Martin, Tiancong Qi, Haibo Zhang, Furong Liu, Miles King, Claire Toth, Eva Nogales, Brian J Staskawicz. Science 2020
131
75

Direct pathogen-induced assembly of an NLR immune receptor complex to form a holoenzyme.
Shoucai Ma, Dmitry Lapin, Li Liu, Yue Sun, Wen Song, Xiaoxiao Zhang, Elke Logemann, Dongli Yu, Jia Wang, Jan Jirschitzka,[...]. Science 2020
128
75

NAD+ cleavage activity by animal and plant TIR domains in cell death pathways.
Shane Horsefield, Hayden Burdett, Xiaoxiao Zhang, Mohammad K Manik, Yun Shi, Jian Chen, Tiancong Qi, Jonathan Gilley, Jhih-Siang Lai, Maxwell X Rank,[...]. Science 2019
205
75

TIR domains of plant immune receptors are NAD+-cleaving enzymes that promote cell death.
Li Wan, Kow Essuman, Ryan G Anderson, Yo Sasaki, Freddy Monteiro, Eui-Hwan Chung, Erin Osborne Nishimura, Aaron DiAntonio, Jeffrey Milbrandt, Jeffery L Dangl,[...]. Science 2019
181
62

SARM1 activation triggers axon degeneration locally via NAD⁺ destruction.
Josiah Gerdts, E J Brace, Yo Sasaki, Aaron DiAntonio, Jeffrey Milbrandt. Science 2015
309
50

Small Molecule SARM1 Inhibitors Recapitulate the SARM1-/- Phenotype and Allow Recovery of a Metastable Pool of Axons Fated to Degenerate.
Robert O Hughes, Todd Bosanac, Xianrong Mao, Thomas M Engber, Aaron DiAntonio, Jeffrey Milbrandt, Rajesh Devraj, Raul Krauss. Cell Rep 2021
49
50

Pharmacological SARM1 inhibition protects axon structure and function in paclitaxel-induced peripheral neuropathy.
Todd Bosanac, Robert O Hughes, Thomas Engber, Rajesh Devraj, Andrew Brearley, Kerstin Danker, Kenneth Young, Jens Kopatz, Melanie Hermann, Antoine Berthemy,[...]. Brain 2021
31
50

Prevention of vincristine-induced peripheral neuropathy by genetic deletion of SARM1 in mice.
Stefanie Geisler, Ryan A Doan, Amy Strickland, Xin Huang, Jeffrey Milbrandt, Aaron DiAntonio. Brain 2016
147
50

Structural basis for SARM1 inhibition and activation under energetic stress.
Michael Sporny, Julia Guez-Haddad, Tami Khazma, Avraham Yaron, Moshe Dessau, Yoel Shkolnisky, Carsten Mim, Michail N Isupov, Ran Zalk, Michael Hons,[...]. Elife 2020
47
50

dSarm/Sarm1 is required for activation of an injury-induced axon death pathway.
Jeannette M Osterloh, Jing Yang, Timothy M Rooney, A Nicole Fox, Robert Adalbert, Eric H Powell, Amy E Sheehan, Michelle A Avery, Rachel Hackett, Mary A Logan,[...]. Science 2012
401
50

The NAD+-mediated self-inhibition mechanism of pro-neurodegenerative SARM1.
Yuefeng Jiang, Tingting Liu, Chia-Hsueh Lee, Qing Chang, Jing Yang, Zhe Zhang. Nature 2020
73
50

Structural and Mechanistic Regulation of the Pro-degenerative NAD Hydrolase SARM1.
Matthew Bratkowski, Tian Xie, Desiree A Thayer, Shradha Lad, Prakhyat Mathur, Yu-San Yang, Gregory Danko, Thomas C Burdett, Jean Danao, Aaron Cantor,[...]. Cell Rep 2020
47
50

Induced proximity of a TIR signaling domain on a plant-mammalian NLR chimera activates defense in plants.
Zane Duxbury, Shanshan Wang, Craig I MacKenzie, Jeannette L Tenthorey, Xiaoxiao Zhang, Sung Un Huh, Lanxi Hu, Lionel Hill, Pok Man Ngou, Pingtao Ding,[...]. Proc Natl Acad Sci U S A 2020
36
50

Activation of TIR signalling boosts pattern-triggered immunity.
Hainan Tian, Zhongshou Wu, Siyu Chen, Kevin Ao, Weijie Huang, Hoda Yaghmaiean, Tongjun Sun, Fang Xu, Yanjun Zhang, Shucai Wang,[...]. Nature 2021
59
50

STING cyclic dinucleotide sensing originated in bacteria.
Benjamin R Morehouse, Apurva A Govande, Adi Millman, Alexander F A Keszei, Brianna Lowey, Gal Ofir, Sichen Shao, Rotem Sorek, Philip J Kranzusch. Nature 2020
104
50

Identification and receptor mechanism of TIR-catalyzed small molecules in plant immunity.
Shijia Huang, Aolin Jia, Wen Song, Giuliana Hessler, Yonggang Meng, Yue Sun, Lina Xu, Henriette Laessle, Jan Jirschitzka, Shoucai Ma,[...]. Science 2022
18
50

TIR domains of plant immune receptors are 2',3'-cAMP/cGMP synthetases mediating cell death.
Dongli Yu, Wen Song, Eddie Yong Jun Tan, Li Liu, Yu Cao, Jan Jirschitzka, Ertong Li, Elke Logemann, Chenrui Xu, Shijia Huang,[...]. Cell 2022
28
50

Programmed axon degeneration: from mouse to mechanism to medicine.
Michael P Coleman, Ahmet Höke. Nat Rev Neurosci 2020
101
37

SARM1 is a multi-functional NAD(P)ase with prominent base exchange activity, all regulated bymultiple physiologically relevant NAD metabolites.
Carlo Angeletti, Adolfo Amici, Jonathan Gilley, Andrea Loreto, Antonio G Trapanotto, Christina Antoniou, Elisa Merlini, Michael P Coleman, Giuseppe Orsomando. iScience 2022
17
37

Constitutively active SARM1 variants that induce neuropathy are enriched in ALS patients.
A Joseph Bloom, Xianrong Mao, Amy Strickland, Yo Sasaki, Jeffrey Milbrandt, Aaron DiAntonio. Mol Neurodegener 2022
16
37

Permeant fluorescent probes visualize the activation of SARM1 and uncover an anti-neurodegenerative drug candidate.
Wan Hua Li, Ke Huang, Yang Cai, Qian Wen Wang, Wen Jie Zhu, Yun Nan Hou, Sujing Wang, Sheng Cao, Zhi Ying Zhao, Xu Jie Xie,[...]. Elife 2021
19
37

Enrichment of SARM1 alleles encoding variants with constitutively hyperactive NADase in patients with ALS and other motor nerve disorders.
Jonathan Gilley, Oscar Jackson, Menelaos Pipis, Mehrdad A Estiar, Ammar Al-Chalabi, Matt C Danzi, Kristel R van Eijk, Stephen A Goutman, Matthew B Harms, Henry Houlden,[...]. Elife 2021
16
37


Structural Evidence for an Octameric Ring Arrangement of SARM1.
Michael Sporny, Julia Guez-Haddad, Mario Lebendiker, Valeria Ulisse, Allison Volf, Carsten Mim, Michail N Isupov, Yarden Opatowsky. J Mol Biol 2019
36
37

Attenuated traumatic axonal injury and improved functional outcome after traumatic brain injury in mice lacking Sarm1.
Nils Henninger, James Bouley, Elif M Sikoglu, Jiyan An, Constance M Moore, Jean A King, Robert Bowser, Marc R Freeman, Robert H Brown. Brain 2016
107
37

Sarm1-mediated axon degeneration requires both SAM and TIR interactions.
Josiah Gerdts, Daniel W Summers, Yo Sasaki, Aaron DiAntonio, Jeffrey Milbrandt. J Neurosci 2013
210
37

A Cell-Permeant Mimetic of NMN Activates SARM1 to Produce Cyclic ADP-Ribose and Induce Non-apoptotic Cell Death.
Zhi Ying Zhao, Xu Jie Xie, Wan Hua Li, Jun Liu, Zhe Chen, Ben Zhang, Ting Li, Song Lu Li, Jun Gang Lu, Liangren Zhang,[...]. iScience 2019
88
37

Intracellular innate immune surveillance devices in plants and animals.
Jonathan D G Jones, Russell E Vance, Jeffery L Dangl. Science 2016
483
37

TIR-only protein RBA1 recognizes a pathogen effector to regulate cell death in Arabidopsis.
Marc T Nishimura, Ryan G Anderson, Karen A Cherkis, Terry F Law, Qingli L Liu, Mischa Machius, Zachary L Nimchuk, Li Yang, Eui-Hwan Chung, Farid El Kasmi,[...]. Proc Natl Acad Sci U S A 2017
84
37

The role of TIR-NBS and TIR-X proteins in plant basal defense responses.
Raja Sekhar Nandety, Jeffery L Caplan, Keri Cavanaugh, Bertrand Perroud, Tadeusz Wroblewski, Richard W Michelmore, Blake C Meyers. Plant Physiol 2013
92
37

Comparative genomic analyses reveal a vast, novel network of nucleotide-centric systems in biological conflicts, immunity and signaling.
A Maxwell Burroughs, Dapeng Zhang, Daniel E Schäffer, Lakshminarayan M Iyer, L Aravind. Nucleic Acids Res 2015
113
37

Structural basis of TIR-domain-assembly formation in MAL- and MyD88-dependent TLR4 signaling.
Thomas Ve, Parimala R Vajjhala, Andrew Hedger, Tristan Croll, Frank DiMaio, Shane Horsefield, Xiong Yu, Peter Lavrencic, Zahid Hassan, Garry P Morgan,[...]. Nat Struct Mol Biol 2017
84
37

Towards the structure of the TIR-domain signalosome.
Surekha Nimma, Thomas Ve, Simon J Williams, Bostjan Kobe. Curr Opin Struct Biol 2017
41
37

Antiviral activity of bacterial TIR domains via immune signalling molecules.
Gal Ofir, Ehud Herbst, Maya Baroz, Daniel Cohen, Adi Millman, Shany Doron, Nitzan Tal, Daniel B A Malheiro, Sergey Malitsky, Gil Amitai,[...]. Nature 2021
32
37

The molecular mechanisms of signaling by cooperative assembly formation in innate immunity pathways.
Parimala R Vajjhala, Thomas Ve, Adam Bentham, Katryn J Stacey, Bostjan Kobe. Mol Immunol 2017
63
37

Structural and functional evidence of bacterial antiphage protection by Thoeris defense system via NAD+ degradation.
Donghyun Ka, Hyejin Oh, Eunyoung Park, Jeong-Han Kim, Euiyoung Bae. Nat Commun 2020
21
37

Pathogen effector recognition-dependent association of NRG1 with EDS1 and SAG101 in TNL receptor immunity.
Xinhua Sun, Dmitry Lapin, Joanna M Feehan, Sara C Stolze, Katharina Kramer, Joram A Dongus, Jakub Rzemieniewski, Servane Blanvillain-Baufumé, Anne Harzen, Jaqueline Bautor,[...]. Nat Commun 2021
45
37

A Coevolved EDS1-SAG101-NRG1 Module Mediates Cell Death Signaling by TIR-Domain Immune Receptors.
Dmitry Lapin, Viera Kovacova, Xinhua Sun, Joram A Dongus, Deepak Bhandari, Patrick von Born, Jaqueline Bautor, Nina Guarneri, Jakub Rzemieniewski, Johannes Stuttmann,[...]. Plant Cell 2019
101
37

Cavity surface residues of PAD4 and SAG101 contribute to EDS1 dimer signaling specificity in plant immunity.
Joram A Dongus, Deepak D Bhandari, Eva Penner, Dmitry Lapin, Sara C Stolze, Anne Harzen, Monika Patel, Lani Archer, Lucas Dijkgraaf, Jyoti Shah,[...]. Plant J 2022
6
50

Cyclic CMP and cyclic UMP mediate bacterial immunity against phages.
Nitzan Tal, Benjamin R Morehouse, Adi Millman, Avigail Stokar-Avihail, Carmel Avraham, Taya Fedorenko, Erez Yirmiya, Ehud Herbst, Alexander Brandis, Tevie Mehlman,[...]. Cell 2021
36
37

An EDS1 heterodimer signalling surface enforces timely reprogramming of immunity genes in Arabidopsis.
Deepak D Bhandari, Dmitry Lapin, Barbara Kracher, Patrick von Born, Jaqueline Bautor, Karsten Niefind, Jane E Parker. Nat Commun 2019
50
37

SARM1-specific motifs in the TIR domain enable NAD+ loss and regulate injury-induced SARM1 activation.
Daniel W Summers, Daniel A Gibson, Aaron DiAntonio, Jeffrey Milbrandt. Proc Natl Acad Sci U S A 2016
75
37

The TIR-domain containing effectors BtpA and BtpB from Brucella abortus impact NAD metabolism.
Julia María Coronas-Serna, Arthur Louche, María Rodríguez-Escudero, Morgane Roussin, Paul R C Imbert, Isabel Rodríguez-Escudero, Laurent Terradot, María Molina, Jean-Pierre Gorvel, Víctor J Cid,[...]. PLoS Pathog 2020
25
37

TIR-catalyzed ADP-ribosylation reactions produce signaling molecules for plant immunity.
Aolin Jia, Shijia Huang, Wen Song, Junli Wang, Yonggang Meng, Yue Sun, Lina Xu, Henriette Laessle, Jan Jirschitzka, Jiao Hou,[...]. Science 2022
18
37

EDS1 signalling: At the nexus of intracellular and surface receptor immunity.
Joram A Dongus, Jane E Parker. Curr Opin Plant Biol 2021
27
37

XDS.
Wolfgang Kabsch. Acta Crystallogr D Biol Crystallogr 2010
37

Features and development of Coot.
P Emsley, B Lohkamp, W G Scott, K Cowtan. Acta Crystallogr D Biol Crystallogr 2010
37


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.