A citation-based method for searching scientific literature

Manuel Schweighauser, Diana Arseni, Mehtap Bacioglu, Melissa Huang, Sofia Lövestam, Yang Shi, Yang Yang, Wenjuan Zhang, Abhay Kotecha, Holly J Garringer, Ruben Vidal, Grace I Hallinan, Kathy L Newell, Airi Tarutani, Shigeo Murayama, Masayuki Miyazaki, Yuko Saito, Mari Yoshida, Kazuko Hasegawa, Tammaryn Lashley, Tamas Revesz, Gabor G Kovacs, John van Swieten, Masaki Takao, Masato Hasegawa, Bernardino Ghetti, Maria Grazia Spillantini, Benjamin Ryskeldi-Falcon, Alexey G Murzin, Michel Goedert, Sjors H W Scheres. Nature 2022
Times Cited: 13







List of co-cited articles
53 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Common variants at 7p21 are associated with frontotemporal lobar degeneration with TDP-43 inclusions.
Vivianna M Van Deerlin, Patrick M A Sleiman, Maria Martinez-Lage, Alice Chen-Plotkin, Li-San Wang, Neill R Graff-Radford, Dennis W Dickson, Rosa Rademakers, Bradley F Boeve, Murray Grossman,[...]. Nat Genet 2010
359
69

Amyloid fibrils in FTLD-TDP are composed of TMEM106B and not TDP-43.
Yi Xiao Jiang, Qin Cao, Michael R Sawaya, Romany Abskharon, Peng Ge, Michael DeTure, Dennis W Dickson, Janine Y Fu, Rachel R Ogorzalek Loo, Joseph A Loo,[...]. Nature 2022
12
75

Homotypic fibrillization of TMEM106B across diverse neurodegenerative diseases.
Andrew Chang, Xinyu Xiang, Jing Wang, Carolyn Lee, Tamta Arakhamia, Marija Simjanoska, Chi Wang, Yari Carlomagno, Guoan Zhang, Shikhar Dhingra,[...]. Cell 2022
9
100

Membrane orientation and subcellular localization of transmembrane protein 106B (TMEM106B), a major risk factor for frontotemporal lobar degeneration.
Christina M Lang, Katrin Fellerer, Benjamin M Schwenk, Peer-Hendrik Kuhn, Elisabeth Kremmer, Dieter Edbauer, Anja Capell, Christian Haass. J Biol Chem 2012
88
38

Structure of pathological TDP-43 filaments from ALS with FTLD.
Diana Arseni, Masato Hasegawa, Alexey G Murzin, Fuyuki Kametani, Makoto Arai, Mari Yoshida, Benjamin Ryskeldi-Falcon. Nature 2022
33
38


Structures of α-synuclein filaments from multiple system atrophy.
Manuel Schweighauser, Yang Shi, Airi Tarutani, Fuyuki Kametani, Alexey G Murzin, Bernardino Ghetti, Tomoyasu Matsubara, Taisuke Tomita, Takashi Ando, Kazuko Hasegawa,[...]. Nature 2020
238
30

Highly accurate protein structure prediction with AlphaFold.
John Jumper, Richard Evans, Alexander Pritzel, Tim Green, Michael Figurnov, Olaf Ronneberger, Kathryn Tunyasuvunakool, Russ Bates, Augustin Žídek, Anna Potapenko,[...]. Nature 2021
30

The FTLD Risk Factor TMEM106B Regulates the Transport of Lysosomes at the Axon Initial Segment of Motoneurons.
Patrick Lüningschrör, Georg Werner, Stijn Stroobants, Soichiro Kakuta, Benjamin Dombert, Daniela Sinske, Renate Wanner, Renate Lüllmann-Rauch, Benedikt Wefers, Wolfgang Wurst,[...]. Cell Rep 2020
23
23

Lysosome size, motility and stress response regulated by fronto-temporal dementia modifier TMEM106B.
Massimiliano Stagi, Zoe A Klein, Travis J Gould, Joerg Bewersdorf, Stephen M Strittmatter. Mol Cell Neurosci 2014
69
23

Structure-based classification of tauopathies.
Yang Shi, Wenjuan Zhang, Yang Yang, Alexey G Murzin, Benjamin Falcon, Abhay Kotecha, Mike van Beers, Airi Tarutani, Fuyuki Kametani, Holly J Garringer,[...]. Nature 2021
119
23

Loss of Tmem106b exacerbates FTLD pathologies and causes motor deficits in progranulin-deficient mice.
Xiaolai Zhou, Mieu Brooks, Peizhou Jiang, Shunsuke Koga, Aamir R Zuberi, Matthew C Baker, Tammee M Parsons, Monica Castanedes-Casey, Virginia Phillips, Ariston L Librero,[...]. EMBO Rep 2020
24
23

A role of the frontotemporal lobar degeneration risk factor TMEM106B in myelination.
Tuancheng Feng, Rory R Sheng, Santiago Solé-Domènech, Mohammed Ullah, Xiaolai Zhou, Christina S Mendoza, Laura Camila Martinez Enriquez, Isabel Iscol Katz, Daniel H Paushter, Peter M Sullivan,[...]. Brain 2020
12
25

Expression of TMEM106B, the frontotemporal lobar degeneration-associated protein, in normal and diseased human brain.
Johanna I Busch, Maria Martinez-Lage, Emily Ashbridge, Murray Grossman, Vivianna M Van Deerlin, Fenghua Hu, Virginia M Y Lee, John Q Trojanowski, Alice S Chen-Plotkin. Acta Neuropathol Commun 2013
21
23

Loss of TMEM106B Ameliorates Lysosomal and Frontotemporal Dementia-Related Phenotypes in Progranulin-Deficient Mice.
Zoe A Klein, Hideyuki Takahashi, Mengxiao Ma, Massimiliano Stagi, Melissa Zhou, TuKiet T Lam, Stephen M Strittmatter. Neuron 2017
92
23

Ubiquitinated TDP-43 in frontotemporal lobar degeneration and amyotrophic lateral sclerosis.
Manuela Neumann, Deepak M Sampathu, Linda K Kwong, Adam C Truax, Matthew C Micsenyi, Thomas T Chou, Jennifer Bruce, Theresa Schuck, Murray Grossman, Christopher M Clark,[...]. Science 2006
23


TMEM106B is associated with frontotemporal lobar degeneration in a clinically diagnosed patient cohort.
Julie van der Zee, Tim Van Langenhove, Gernot Kleinberger, Kristel Sleegers, Sebastiaan Engelborghs, Rik Vandenberghe, Patrick Santens, Marleen Van den Broeck, Geert Joris, Jolien Brys,[...]. Brain 2011
86
15

The FTLD risk factor TMEM106B and MAP6 control dendritic trafficking of lysosomes.
Benjamin M Schwenk, Christina M Lang, Sebastian Hogl, Sabina Tahirovic, Denise Orozco, Kristin Rentzsch, Stefan F Lichtenthaler, Casper C Hoogenraad, Anja Capell, Christian Haass,[...]. EMBO J 2014
101
15

MolProbity: all-atom structure validation for macromolecular crystallography.
Vincent B Chen, W Bryan Arendall, Jeffrey J Headd, Daniel A Keedy, Robert M Immormino, Gary J Kapral, Laura W Murray, Jane S Richardson, David C Richardson. Acta Crystallogr D Biol Crystallogr 2010
15

A harmonized classification system for FTLD-TDP pathology.
Ian R A Mackenzie, Manuela Neumann, Atik Baborie, Deepak M Sampathu, Daniel Du Plessis, Evelyn Jaros, Robert H Perry, John Q Trojanowski, David M A Mann, Virginia M Y Lee. Acta Neuropathol 2011
646
15


Mutations in progranulin cause tau-negative frontotemporal dementia linked to chromosome 17.
Matt Baker, Ian R Mackenzie, Stuart M Pickering-Brown, Jennifer Gass, Rosa Rademakers, Caroline Lindholm, Julie Snowden, Jennifer Adamson, A Dessa Sadovnick, Sara Rollinson,[...]. Nature 2006
15

Helical reconstruction in RELION.
Shaoda He, Sjors H W Scheres. J Struct Biol 2017
223
15


Cryo-EM of amyloid fibrils and cellular aggregates.
Anthony Wp Fitzpatrick, Helen R Saibil. Curr Opin Struct Biol 2019
56
15

Cryo-EM structures of tau filaments from Alzheimer's disease.
Anthony W P Fitzpatrick, Benjamin Falcon, Shaoda He, Alexey G Murzin, Garib Murshudov, Holly J Garringer, R Anthony Crowther, Bernardino Ghetti, Michel Goedert, Sjors H W Scheres. Nature 2017
960
15

Expanded GGGGCC hexanucleotide repeat in noncoding region of C9ORF72 causes chromosome 9p-linked FTD and ALS.
Mariely DeJesus-Hernandez, Ian R Mackenzie, Bradley F Boeve, Adam L Boxer, Matt Baker, Nicola J Rutherford, Alexandra M Nicholson, NiCole A Finch, Heather Flynn, Jennifer Adamson,[...]. Neuron 2011
15

New tools for automated high-resolution cryo-EM structure determination in RELION-3.
Jasenko Zivanov, Takanori Nakane, Björn O Forsberg, Dari Kimanius, Wim Jh Hagen, Erik Lindahl, Sjors Hw Scheres. Elife 2018
15

TMEM106B p.T185S regulates TMEM106B protein levels: implications for frontotemporal dementia.
Alexandra M Nicholson, Nicole A Finch, Aleksandra Wojtas, Matt C Baker, Ralph B Perkerson, Monica Castanedes-Casey, Linda Rousseau, Luisa Benussi, Giuliano Binetti, Roberta Ghidoni,[...]. J Neurochem 2013
62
15

TMEM106B regulates progranulin levels and the penetrance of FTLD in GRN mutation carriers.
N Finch, M M Carrasquillo, M Baker, N J Rutherford, G Coppola, M Dejesus-Hernandez, R Crook, T Hunter, R Ghidoni, L Benussi,[...]. Neurology 2011
169
15

A genome-wide association study with 1,126,563 individuals identifies new risk loci for Alzheimer's disease.
Douglas P Wightman, Iris E Jansen, Jeanne E Savage, Alexey A Shadrin, Shahram Bahrami, Dominic Holland, Arvid Rongve, Sigrid Børte, Bendik S Winsvold, Ole Kristian Drange,[...]. Nat Genet 2021
100
15

Common pathobiochemical hallmarks of progranulin-associated frontotemporal lobar degeneration and neuronal ceroid lipofuscinosis.
Julia K Götzl, Kohji Mori, Markus Damme, Katrin Fellerer, Sabina Tahirovic, Gernot Kleinberger, Jonathan Janssens, Julie van der Zee, Christina M Lang, Elisabeth Kremmer,[...]. Acta Neuropathol 2014
136
15

Cellular milieu imparts distinct pathological α-synuclein strains in α-synucleinopathies.
Chao Peng, Ronald J Gathagan, Dustin J Covell, Coraima Medellin, Anna Stieber, John L Robinson, Bin Zhang, Rose M Pitkin, Modupe F Olufemi, Kelvin C Luk,[...]. Nature 2018
317
15

Loss of TMEM106B leads to myelination deficits: implications for frontotemporal dementia treatment strategies.
Xiaolai Zhou, Alexandra M Nicholson, Yingxue Ren, Mieu Brooks, Peizhou Jiang, Aamir Zuberi, Hung Nguyen Phuoc, Ralph B Perkerson, Billie Matchett, Tammee M Parsons,[...]. Brain 2020
17
15

Potent prion-like behaviors of pathogenic α-synuclein and evaluation of inactivation methods.
Airi Tarutani, Tetsuaki Arai, Shigeo Murayama, Shin-Ichi Hisanaga, Masato Hasegawa. Acta Neuropathol Commun 2018
49
15

Strikingly different clinicopathological phenotypes determined by progranulin-mutation dosage.
Katherine R Smith, John Damiano, Silvana Franceschetti, Stirling Carpenter, Laura Canafoglia, Michela Morbin, Giacomina Rossi, Davide Pareyson, Sara E Mole, John F Staropoli,[...]. Am J Hum Genet 2012
322
15

The frontotemporal lobar degeneration risk factor, TMEM106B, regulates lysosomal morphology and function.
Owen A Brady, Yanqiu Zheng, Kira Murphy, Marshall Huang, Fenghua Hu. Hum Mol Genet 2013
114
15

Loss of TMEM106B and PGRN leads to severe lysosomal abnormalities and neurodegeneration in mice.
Tuancheng Feng, Shuyi Mai, Jenn Marie Roscoe, Rory R Sheng, Mohammed Ullah, Junke Zhang, Isabel Iscol Katz, Haiyuan Yu, Wenjun Xiong, Fenghua Hu. EMBO Rep 2020
28
15

The lysosomal function of progranulin, a guardian against neurodegeneration.
Daniel H Paushter, Huan Du, Tuancheng Feng, Fenghua Hu. Acta Neuropathol 2018
83
15

The TMEM106B FTLD-protective variant, rs1990621, is also associated with increased neuronal proportion.
Zeran Li, Fabiana H G Farias, Umber Dube, Jorge L Del-Aguila, Kathie A Mihindukulasuriya, Maria Victoria Fernandez, Laura Ibanez, John P Budde, Fengxian Wang, Allison M Lake,[...]. Acta Neuropathol 2020
24
15

Loss of TMEM106B potentiates lysosomal and FTLD-like pathology in progranulin-deficient mice.
Georg Werner, Markus Damme, Martin Schludi, Johannes Gnörich, Karin Wind, Katrin Fellerer, Benedikt Wefers, Wolfgang Wurst, Dieter Edbauer, Matthias Brendel,[...]. EMBO Rep 2020
20
15

The TMEM106B locus and TDP-43 pathology in older persons without FTLD.
Lei Yu, Philip L De Jager, Jingyun Yang, John Q Trojanowski, David A Bennett, Julie A Schneider. Neurology 2015
59
15

A Dementia-Associated Risk Variant near TMEM106B Alters Chromatin Architecture and Gene Expression.
Michael D Gallagher, Marijan Posavi, Peng Huang, Travis L Unger, Yosef Berlyand, Analise L Gruenewald, Alessandra Chesi, Elisabetta Manduchi, Andrew D Wells, Struan F A Grant,[...]. Am J Hum Genet 2017
52
15

Premature polyadenylation-mediated loss of stathmin-2 is a hallmark of TDP-43-dependent neurodegeneration.
Ze'ev Melamed, Jone López-Erauskin, Michael W Baughn, Ouyang Zhang, Kevin Drenner, Ying Sun, Fernande Freyermuth, Moira A McMahon, Melinda S Beccari, Jon W Artates,[...]. Nat Neurosci 2019
160
15

ALS-implicated protein TDP-43 sustains levels of STMN2, a mediator of motor neuron growth and repair.
Joseph R Klim, Luis A Williams, Francesco Limone, Irune Guerra San Juan, Brandi N Davis-Dusenbery, Daniel A Mordes, Aaron Burberry, Michael J Steinbaugh, Kanchana K Gamage, Rory Kirchner,[...]. Nat Neurosci 2019
169
15

Truncated stathmin-2 is a marker of TDP-43 pathology in frontotemporal dementia.
Mercedes Prudencio, Jack Humphrey, Sarah Pickles, Anna-Leigh Brown, Sarah E Hill, Jennifer M Kachergus, J Shi, Michael G Heckman, Matthew R Spiegel, Casey Cook,[...]. J Clin Invest 2020
40
15

TDP-43 proteinopathies: a new wave of neurodegenerative diseases.
Eva Maria Johanna de Boer, Viyanti K Orie, Timothy Williams, Mark R Baker, Hugo M De Oliveira, Tuomo Polvikoski, Matthew Silsby, Parvathi Menon, Mehdi van den Bos, Glenda M Halliday,[...]. J Neurol Neurosurg Psychiatry 2020
72
15

TDP-43 is a component of ubiquitin-positive tau-negative inclusions in frontotemporal lobar degeneration and amyotrophic lateral sclerosis.
Tetsuaki Arai, Masato Hasegawa, Haruhiko Akiyama, Kenji Ikeda, Takashi Nonaka, Hiroshi Mori, David Mann, Kuniaki Tsuchiya, Mari Yoshida, Yoshio Hashizume,[...]. Biochem Biophys Res Commun 2006
15

RNA Binding Antagonizes Neurotoxic Phase Transitions of TDP-43.
Jacob R Mann, Amanda M Gleixner, Jocelyn C Mauna, Edward Gomes, Michael R DeChellis-Marks, Patrick G Needham, Katie E Copley, Bryan Hurtle, Bede Portz, Noah J Pyles,[...]. Neuron 2019
212
15


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.