A citation-based method for searching scientific literature

Satria P Sajuthi, Jamie L Everman, Nathan D Jackson, Benjamin Saef, Cydney L Rios, Camille M Moore, Angel C Y Mak, Celeste Eng, Ana Fairbanks-Mahnke, Sandra Salazar, Jennifer Elhawary, Scott Huntsman, Vivian Medina, Deborah A Nickerson, Soren Germer, Michael C Zody, Gonçalo Abecasis, Hyun Min Kang, Kenneth M Rice, Rajesh Kumar, Noah A Zaitlen, Sam Oh, José Rodríguez-Santana, Esteban G Burchard, Max A Seibold. Nat Commun 2022
Times Cited: 2







List of co-cited articles
articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Dupilumab progressively improves systemic and cutaneous abnormalities in patients with atopic dermatitis.
Emma Guttman-Yassky, Robert Bissonnette, Benjamin Ungar, Mayte Suárez-Fariñas, Marius Ardeleanu, Hitokazu Esaki, Maria Suprun, Yeriel Estrada, Hui Xu, Xiangyu Peng,[...]. J Allergy Clin Immunol 2019
256
50

17β-Estradiol protects the esophageal epithelium from IL-13-induced barrier dysfunction and remodeling.
Justin C Wheeler, Simone Vanoni, Chang Zeng, Lisa Waggoner, Yanfen Yang, David Wu, Jazib Uddin, Rebekah Karns, Leah Kottyan, Vincent Mukkada,[...]. J Allergy Clin Immunol 2019
15
50

Mechanisms of Dupilumab.
Hani Harb, Talal A Chatila. Clin Exp Allergy 2020
94
50

ComBat-seq: batch effect adjustment for RNA-seq count data.
Yuqing Zhang, Giovanni Parmigiani, W Evan Johnson. NAR Genom Bioinform 2020
162
50

Advances in asthma and allergic disease genetics: Is bigger always better?
Nathan Schoettler, Elke Rodríguez, Stephan Weidinger, Carole Ober. J Allergy Clin Immunol 2019
33
50

Transcriptomic Profiling of Tape-Strips From Moderate to Severe Atopic Dermatitis Patients Treated With Dupilumab.
Daniela Mikhaylov, Ester Del Duca, Caroline Meyer Olesen, Helen He, Jianni Wu, Benjamin Ungar, Yeriel Estrada, Ning Zhang, Mashkura Chowdhury, Maja-Lisa Clausen,[...]. Dermatitis 2021
4
50

The Asian atopic dermatitis phenotype combines features of atopic dermatitis and psoriasis with increased TH17 polarization.
Shinji Noda, Mayte Suárez-Fariñas, Benjamin Ungar, Soo Jung Kim, Cristina de Guzman Strong, Hui Xu, Xiangyu Peng, Yeriel D Estrada, Saeko Nakajima, Tetsuya Honda,[...]. J Allergy Clin Immunol 2015
316
50

Asthmatics with exacerbation during acute respiratory illness exhibit unique transcriptional signatures within the nasal mucosa.
Peter McErlean, Sergejs Berdnikovs, Silvio Favoreto, Junqing Shen, Assel Biyasheva, Rebecca Barbeau, Chris Eisley, Andrea Barczak, Theresa Ward, Robert P Schleimer,[...]. Genome Med 2014
51
50

Complications of skin biopsy.
Kumar Abhishek, Niti Khunger. J Cutan Aesthet Surg 2015
25
50

A survey of best practices for RNA-seq data analysis.
Ana Conesa, Pedro Madrigal, Sonia Tarazona, David Gomez-Cabrero, Alejandra Cervera, Andrew McPherson, Michał Wojciech Szcześniak, Daniel J Gaffney, Laura L Elo, Xuegong Zhang,[...]. Genome Biol 2016
50

Circulating microRNAs and prediction of asthma exacerbation in childhood asthma.
Alvin T Kho, Michael J McGeachie, Kip G Moore, Jody M Sylvia, Scott T Weiss, Kelan G Tantisira. Respir Res 2018
42
50

Comprehensive mass-spectrometry-based proteome quantification of haploid versus diploid yeast.
Lyris M F de Godoy, Jesper V Olsen, Jürgen Cox, Michael L Nielsen, Nina C Hubner, Florian Fröhlich, Tobias C Walther, Matthias Mann. Nature 2008
700
50

High intraepithelial eosinophil counts in esophageal squamous epithelium are not specific for eosinophilic esophagitis in adults.
Sonali Rodrigo, Gebran Abboud, Daniel Oh, Steven R DeMeester, Jeffrey Hagen, John Lipham, Tom R DeMeester, Parakrama Chandrasoma. Am J Gastroenterol 2008
151
50

Single-cell RNA sequencing of mast cells in eosinophilic esophagitis reveals heterogeneity, local proliferation, and activation that persists in remission.
Netali Ben-Baruch Morgenstern, Adina Y Ballaban, Ting Wen, Tetsuo Shoda, Julie M Caldwell, Kara Kliewer, Jennifer M Felton, J Pablo Abonia, Vincent A Mukkada, Philip E Putnam,[...]. J Allergy Clin Immunol 2022
7
50

Molecular diagnosis of eosinophilic esophagitis by gene expression profiling.
Ting Wen, Emily M Stucke, Tommie M Grotjan, Katherine A Kemme, J Pablo Abonia, Philip E Putnam, James P Franciosi, Jose M Garza, Ajay Kaul, Eileen C King,[...]. Gastroenterology 2013
171
50

Eleven grand challenges in single-cell data science.
David Lähnemann, Johannes Köster, Ewa Szczurek, Davis J McCarthy, Stephanie C Hicks, Mark D Robinson, Catalina A Vallejos, Kieran R Campbell, Niko Beerenwinkel, Ahmed Mahfouz,[...]. Genome Biol 2020
301
50

RNA sequencing atopic dermatitis transcriptome profiling provides insights into novel disease mechanisms with potential therapeutic implications.
Mayte Suárez-Fariñas, Benjamin Ungar, Joel Correa da Rosa, David A Ewald, Mariya Rozenblit, Juana Gonzalez, Hui Xu, Xiuzhong Zheng, Xiangyu Peng, Yeriel D Estrada,[...]. J Allergy Clin Immunol 2015
172
50

Role of Biologics in Asthma.
Mary Clare McGregor, James G Krings, Parameswaran Nair, Mario Castro. Am J Respir Crit Care Med 2019
176
50

Single-cell transcriptomic analysis reveals key immune cell phenotypes in the lungs of patients with asthma exacerbation.
Hui Li, Huaqi Wang, Leon Sokulsky, Shaoxia Liu, Rui Yang, Xiaojie Liu, Lujia Zhou, Juan Li, Chun Huang, Fangfang Li,[...]. J Allergy Clin Immunol 2021
12
50

Refractory neutrophilic asthma and ciliary genes.
Vamsi P Guntur, Laurie A Manka, Camille M Moore, Elizabeth Wynn, Eszter K Vladar, Rafeul Alam, Tuyet-Hang Pham, Tasha E Fingerlin, Richard J Martin. J Allergy Clin Immunol 2022
1
100

Efficacy and safety of ustekinumab treatment in adults with moderate-to-severe atopic dermatitis.
Saakshi Khattri, Patrick M Brunner, Sandra Garcet, Robert Finney, Steven R Cohen, Margeaux Oliva, Riana Dutt, Judilyn Fuentes-Duculan, Xiuzhong Zheng, Xuan Li,[...]. Exp Dermatol 2017
142
50

Fine-mapping studies distinguish genetic risks for childhood- and adult-onset asthma in the HLA region.
Selene M Clay, Nathan Schoettler, Andrew M Goldstein, Peter Carbonetto, Matthew Dapas, Matthew C Altman, Mario G Rosasco, James E Gern, Daniel J Jackson, Hae Kyung Im,[...]. Genome Med 2022
1
100

Shared genetic origin of asthma, hay fever and eczema elucidates allergic disease biology.
Manuel A Ferreira, Judith M Vonk, Hansjörg Baurecht, Ingo Marenholz, Chao Tian, Joshua D Hoffman, Quinta Helmer, Annika Tillander, Vilhelmina Ullemar, Jenny van Dongen,[...]. Nat Genet 2017
251
50

dsRNA-induced changes in gene expression profiles of primary nasal and bronchial epithelial cells from patients with asthma, rhinitis and controls.
Ariane H Wagener, Aeilko H Zwinderman, Silvia Luiten, Wytske J Fokkens, Elisabeth H Bel, Peter J Sterk, Cornelis M van Drunen. Respir Res 2014
20
50

Dual RNA-seq reveals viral infections in asthmatic children without respiratory illness which are associated with changes in the airway transcriptome.
Agata Wesolowska-Andersen, Jamie L Everman, Rebecca Davidson, Cydney Rios, Rachelle Herrin, Celeste Eng, William J Janssen, Andrew H Liu, Sam S Oh, Rajesh Kumar,[...]. Genome Biol 2017
42
50

Dissecting childhood asthma with nasal transcriptomics distinguishes subphenotypes of disease.
Alex Poole, Cydney Urbanek, Celeste Eng, Jeoffrey Schageman, Sean Jacobson, Brian P O'Connor, Joshua M Galanter, Christopher R Gignoux, Lindsey A Roth, Rajesh Kumar,[...]. J Allergy Clin Immunol 2014
154
50

Application of moisturizer to neonates prevents development of atopic dermatitis.
Kenta Horimukai, Kumiko Morita, Masami Narita, Mai Kondo, Hiroshi Kitazawa, Makoto Nozaki, Yukiko Shigematsu, Kazue Yoshida, Hironori Niizeki, Ken-Ichiro Motomura,[...]. J Allergy Clin Immunol 2014
331
50

Atopic dermatitis in Chinese patients shows TH2/TH17 skewing with psoriasiform features.
Tom C Chan, Riana D Sanyal, Ana B Pavel, Jacob Glickman, Xiuzhong Zheng, Hui Xu, Yung-Tsu Cho, Tsen-Feng Tsai, Huei-Chi Wen, Xiangyu Peng,[...]. J Allergy Clin Immunol 2018
44
50

Resolving host-pathogen interactions by dual RNA-seq.
Alexander J Westermann, Lars Barquist, Jörg Vogel. PLoS Pathog 2017
140
50

Epithelial interleukin-25 is a key mediator in Th2-high, corticosteroid-responsive asthma.
Dan Cheng, Zheng Xue, Lingling Yi, Huimin Shi, Kan Zhang, Xiaorong Huo, Luke R Bonser, Jianping Zhao, Yongjian Xu, David J Erle,[...]. Am J Respir Crit Care Med 2014
126
50

Human airway mast cells proliferate and acquire distinct inflammation-driven phenotypes during type 2 inflammation.
Daniel F Dwyer, Jose Ordovas-Montanes, Samuel J Allon, Kathleen M Buchheit, Marko Vukovic, Tahereh Derakhshan, Chunli Feng, Juying Lai, Travis K Hughes, Sarah K Nyquist,[...]. Sci Immunol 2021
37
50

Phases of biomarker development for early detection of cancer.
M S Pepe, R Etzioni, Z Feng, J D Potter, M L Thompson, M Thornquist, M Winget, Y Yasui. J Natl Cancer Inst 2001
50

Precision medicine in patients with allergic diseases: Airway diseases and atopic dermatitis-PRACTALL document of the European Academy of Allergy and Clinical Immunology and the American Academy of Allergy, Asthma & Immunology.
Antonella Muraro, Robert F Lemanske, Peter W Hellings, Cezmi A Akdis, Thomas Bieber, Thomas B Casale, Marek Jutel, Peck Y Ong, Lars K Poulsen, Peter Schmid-Grendelmeier,[...]. J Allergy Clin Immunol 2016
186
50

Endotype of allergic asthma with airway obstruction in urban children.
Matthew C Altman, Agustin Calatroni, Sima Ramratnam, Daniel J Jackson, Scott Presnell, Mario G Rosasco, Peter J Gergen, Leonard B Bacharier, George T O'Connor, Megan T Sandel,[...]. J Allergy Clin Immunol 2021
12
50

Genome-wide association analysis of 350 000 Caucasians from the UK Biobank identifies novel loci for asthma, hay fever and eczema.
Åsa Johansson, Mathias Rask-Andersen, Torgny Karlsson, Weronica E Ek. Hum Mol Genet 2019
47
50

Single-Cell and Population Transcriptomics Reveal Pan-epithelial Remodeling in Type 2-High Asthma.
Nathan D Jackson, Jamie L Everman, Maurizio Chioccioli, Luigi Feriani, Katherine C Goldfarbmuren, Satria P Sajuthi, Cydney L Rios, Roger Powell, Michael Armstrong, Joe Gomez,[...]. Cell Rep 2020
27
50

Defining the transcriptome and proteome in three functionally different human cell lines.
Emma Lundberg, Linn Fagerberg, Daniel Klevebring, Ivan Matic, Tamar Geiger, Juergen Cox, Cajsa Algenäs, Joakim Lundeberg, Matthias Mann, Mathias Uhlen. Mol Syst Biol 2010
259
50

Allergic inflammatory memory in human respiratory epithelial progenitor cells.
Jose Ordovas-Montanes, Daniel F Dwyer, Sarah K Nyquist, Kathleen M Buchheit, Marko Vukovic, Chaarushena Deb, Marc H Wadsworth, Travis K Hughes, Samuel W Kazer, Eri Yoshimoto,[...]. Nature 2018
200
50

Transcriptomic Analysis Links Eosinophilic Esophagitis and Atopic Dermatitis.
Rémi Doucet-Ladevèze, Sébastien Holvoet, Frédéric Raymond, Francis Foata, Gurjit K Khurana Hershey, Joseph D Sherrill, Marc E Rothenberg, Carine Blanchard. Front Pediatr 2019
14
50


Targeting the NF-kappaB pathway in asthma and chronic obstructive pulmonary disease.
Michael R Edwards, Nathan W Bartlett, Deborah Clarke, Mark Birrell, Maria Belvisi, Sebastian L Johnston. Pharmacol Ther 2009
270
50

Exhaled biomarkers and gene expression at preschool age improve asthma prediction at 6 years of age.
Ester M M Klaassen, Kim D G van de Kant, Quirijn Jöbsis, Onno C P van Schayck, Agnieszka Smolinska, Jan W Dallinga, Frederik J van Schooten, Gertjan J M den Hartog, Johan C de Jongste, Ger T Rijkers,[...]. Am J Respir Crit Care Med 2015
55
50

The IL-4, IL-13 and IL-31 pathways in atopic dermatitis.
Celina Dubin, Ester Del Duca, Emma Guttman-Yassky. Expert Rev Clin Immunol 2021
19
50

Crisaborole and atopic dermatitis skin biomarkers: An intrapatient randomized trial.
Robert Bissonnette, Ana B Pavel, Aisleen Diaz, John L Werth, Chuanbo Zang, Ivana Vranic, Vivek S Purohit, Michael A Zielinski, Bonnie Vlahos, Yeriel D Estrada,[...]. J Allergy Clin Immunol 2019
47
50

Lung function decline in asthma patients with elevated bronchial CD8, CD4 and CD3 cells.
Irene den Otter, Luuk N A Willems, Annemarie van Schadewijk, Simone van Wijngaarden, Kirsten Janssen, Ronald C de Jeu, Jacob K Sont, Peter J Sterk, Pieter S Hiemstra. Eur Respir J 2016
28
50

Baseline IL-22 expression in patients with atopic dermatitis stratifies tissue responses to fezakinumab.
Patrick M Brunner, Ana B Pavel, Saakshi Khattri, Alexandra Leonard, Kunal Malik, Sharon Rose, Shelbi Jim On, Anjali S Vekaria, Claudia Traidl-Hoffmann, Giselle K Singer,[...]. J Allergy Clin Immunol 2019
85
50

Dual transcriptomic and epigenomic study of reaction severity in peanut-allergic children.
Anh N Do, Corey T Watson, Ariella T Cohain, Robert S Griffin, Alexander Grishin, Robert A Wood, A Wesley Burks, Stacie M Jones, Amy Scurlock, Donald Y M Leung,[...]. J Allergy Clin Immunol 2020
21
50

Intragenic copy number variation within filaggrin contributes to the risk of atopic dermatitis with a dose-dependent effect.
Sara J Brown, Karin Kroboth, Aileen Sandilands, Linda E Campbell, Elizabeth Pohler, Sanja Kezic, Heather J Cordell, W H Irwin McLean, Alan D Irvine. J Invest Dermatol 2012
140
50

COVID-19-related Genes in Sputum Cells in Asthma. Relationship to Demographic Features and Corticosteroids.
Michael C Peters, Satria Sajuthi, Peter Deford, Stephanie Christenson, Cydney L Rios, Michael T Montgomery, Prescott G Woodruff, David T Mauger, Serpil C Erzurum, Mats W Johansson,[...]. Am J Respir Crit Care Med 2020
261
50

Improvements and impacts of GRCh38 human reference on high throughput sequencing data analysis.
Yan Guo, Yulin Dai, Hui Yu, Shilin Zhao, David C Samuels, Yu Shyr. Genomics 2017
67
50


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.