A citation-based method for searching scientific literature

Samuel R Witus, Weixing Zhao, Peter S Brzovic, Rachel E Klevit. Trends Biochem Sci 2022
Times Cited: 1







List of co-cited articles
articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Two molecularly distinct G(2)/M checkpoints are induced by ionizing irradiation.
Bo Xu, Seong-Tae Kim, Dae-Sik Lim, Michael B Kastan. Mol Cell Biol 2002
382
100

Impact of amino acid substitutions at secondary structures in the BRCT domains of the tumor suppressor BRCA1: Implications for clinical annotation.
Vanessa C Fernandes, Volha A Golubeva, Giuliano Di Pietro, Cara Shields, Kwabena Amankwah, Thales C Nepomuceno, Giuliana de Gregoriis, Renata B V Abreu, Carly Harro, Thiago T Gomes,[...]. J Biol Chem 2019
18
100

A small molecule that induces translational readthrough of CFTR nonsense mutations by eRF1 depletion.
Jyoti Sharma, Ming Du, Eric Wong, Venkateshwar Mutyam, Yao Li, Jianguo Chen, Jamie Wangen, Kari Thrasher, Lianwu Fu, Ning Peng,[...]. Nat Commun 2021
18
100

PTC124 targets genetic disorders caused by nonsense mutations.
Ellen M Welch, Elisabeth R Barton, Jin Zhuo, Yuki Tomizawa, Westley J Friesen, Panayiota Trifillis, Sergey Paushkin, Meenal Patel, Christopher R Trotta, Seongwoo Hwang,[...]. Nature 2007
761
100


Characterization of paired tumor and non-tumor cell lines established from patients with breast cancer.
A F Gazdar, V Kurvari, A Virmani, L Gollahon, M Sakaguchi, M Westerfield, D Kodagoda, V Stasny, H T Cunningham, I I Wistuba,[...]. Int J Cancer 1998
212
100

BRCA1 recruitment to damaged DNA sites is dependent on CDK9.
Thales C Nepomuceno, Vanessa C Fernandes, Thiago T Gomes, Renato S Carvalho, Guilherme Suarez-Kurtz, Alvaro N Monteiro, Marcelo A Carvalho. Cell Cycle 2017
13
100

Probing structure-function relationships in missense variants in the carboxy-terminal region of BRCA1.
Renato S Carvalho, Renata B V Abreu, Aneliya Velkova, Sylvia Marsillac, Renato S Rodarte, Guilherme Suarez-Kurtz, Edwin S Iversen, Alvaro N A Monteiro, Marcelo A Carvalho. PLoS One 2014
7
100

Nonsense suppression therapies in human genetic diseases.
Patrícia Martins-Dias, Luísa Romão. Cell Mol Life Sci 2021
14
100

Readthrough of stop codons by use of aminoglycosides in cells from xeroderma pigmentosum group C patients.
Christiane Kuschal, Sikandar G Khan, Benedikt Enk, John J DiGiovanna, Kenneth H Kraemer. Exp Dermatol 2015
11
100

Ataluren for the treatment of nonsense-mutation cystic fibrosis: a randomised, double-blind, placebo-controlled phase 3 trial.
Eitan Kerem, Michael W Konstan, Kris De Boeck, Frank J Accurso, Isabelle Sermet-Gaudelus, Michael Wilschanski, J Stuart Elborn, Paola Melotti, Inez Bronsveld, Isabelle Fajac,[...]. Lancet Respir Med 2014
238
100


Aminoglycoside induced ototoxicity.
O'Neil W Guthrie. Toxicology 2008
165
100

Repair of UV photolesions in xeroderma pigmentosum group C cells induced by translational readthrough of premature termination codons.
Christiane Kuschal, John J DiGiovanna, Sikandar G Khan, Richard A Gatti, Kenneth H Kraemer. Proc Natl Acad Sci U S A 2013
43
100

Determination of cancer risk associated with germ line BRCA1 missense variants by functional analysis.
Marcelo A Carvalho, Sylvia M Marsillac, Rachel Karchin, Siranoush Manoukian, Scott Grist, Ramona F Swaby, Turan P Urmenyi, Edson Rondinelli, Rosane Silva, Luis Gayol,[...]. Cancer Res 2007
93
100

Homologous recombination and human health: the roles of BRCA1, BRCA2, and associated proteins.
Rohit Prakash, Yu Zhang, Weiran Feng, Maria Jasin. Cold Spring Harb Perspect Biol 2015
458
100

In vitro prediction of stop-codon suppression by intravenous gentamicin in patients with cystic fibrosis: a pilot study.
Isabelle Sermet-Gaudelus, Michel Renouil, Anne Fajac, Laure Bidou, Bastien Parbaille, Sébastien Pierrot, Nolwen Davy, Elise Bismuth, Philippe Reinert, Gérard Lenoir,[...]. BMC Med 2007
115
100

BRCA1 protein products ... Functional motifs...
E V Koonin, S F Altschul, P Bork. Nat Genet 1996
336
100

Transient mammalian cell transfection with polyethylenimine (PEI).
Patti A Longo, Jennifer M Kavran, Min-Sung Kim, Daniel J Leahy. Methods Enzymol 2013
294
100

Identification of the amino acids inserted during suppression of CFTR nonsense mutations and determination of their functional consequences.
Xiaojiao Xue, Venkateshwar Mutyam, Amita Thakerar, James Mobley, Robert J Bridges, Steven M Rowe, Kim M Keeling, David M Bedwell. Hum Mol Genet 2017
48
100


Risks of Breast, Ovarian, and Contralateral Breast Cancer for BRCA1 and BRCA2 Mutation Carriers.
Karoline B Kuchenbaecker, John L Hopper, Daniel R Barnes, Kelly-Anne Phillips, Thea M Mooij, Marie-José Roos-Blom, Sarah Jervis, Flora E van Leeuwen, Roger L Milne, Nadine Andrieu,[...]. JAMA 2017
100

The BRCT Domains of the BRCA1 and BARD1 Tumor Suppressors Differentially Regulate Homology-Directed Repair and Stalled Fork Protection.
David Billing, Michiko Horiguchi, Foon Wu-Baer, Angelo Taglialatela, Giuseppe Leuzzi, Silvia Alvarez Nanez, Wenxia Jiang, Shan Zha, Matthias Szabolcs, Chyuan-Sheng Lin,[...]. Mol Cell 2018
42
100

Aminoglycoside-induced nephrotoxicity.
Kurt A Wargo, Jonathan D Edwards. J Pharm Pract 2014
114
100

Ubiquitin-binding protein RAP80 mediates BRCA1-dependent DNA damage response.
Hongtae Kim, Junjie Chen, Xiaochun Yu. Science 2007
426
100

Aminoglycoside-induced suppression of CYP2C19*3 premature stop codon.
Mateus Fuchshuber-Moraes, Renato Sampaio Carvalho, Christian Rimmbach, Dieter Rosskopf, Marcelo Alex Carvalho, Guilherme Suarez-Kurtz. Pharmacogenet Genomics 2011
7
100

Nonsense-Mediated mRNA Decay: Pathologies and the Potential for Novel Therapeutics.
Kamila Pawlicka, Umesh Kalathiya, Javier Alfaro. Cancers (Basel) 2020
19
100


Ectopic expression of histone H2AX mutants reveals a role for its post-translational modifications.
Jonathan Rios-Doria, Aneliya Velkova, Virna Dapic, José M Galán-Caridad, Vesna Dapic, Marcelo A Carvalho, Johana Melendez, Alvaro N A Monteiro. Cancer Biol Ther 2009
11
100





Links between genome integrity and BRCA1 tumor suppression.
Mischa L Li, Roger A Greenberg. Trends Biochem Sci 2012
80
100

Rescue of non-sense mutated p53 tumor suppressor gene by aminoglycosides.
Célia Floquet, Jules Deforges, Jean-Pierre Rousset, Laure Bidou. Nucleic Acids Res 2011
94
100

Ataluren stimulates ribosomal selection of near-cognate tRNAs to promote nonsense suppression.
Bijoyita Roy, Westley J Friesen, Yuki Tomizawa, John D Leszyk, Jin Zhuo, Briana Johnson, Jumana Dakka, Christopher R Trotta, Xiaojiao Xue, Venkateshwar Mutyam,[...]. Proc Natl Acad Sci U S A 2016
107
100

Suppression of CFTR premature termination codons and rescue of CFTR protein and function by the synthetic aminoglycoside NB54.
Steven M Rowe, Peter Sloane, Li Ping Tang, Kyle Backer, Marina Mazur, Jessica Buckley-Lanier, Igor Nudelman, Valery Belakhov, Zsuzsa Bebok, Erik Schwiebert,[...]. J Mol Med (Berl) 2011
55
100

BRCA1 regulates the G2/M checkpoint by activating Chk1 kinase upon DNA damage.
Ronit I Yarden, Sherly Pardo-Reoyo, Magda Sgagias, Kenneth H Cowan, Lawrence C Brody. Nat Genet 2002
377
100

BRCA1 tumor suppression depends on BRCT phosphoprotein binding, but not its E3 ligase activity.
Reena Shakya, Latarsha J Reid, Colleen R Reczek, Francesca Cole, Dieter Egli, Chyuan-Sheng Lin, Dirk G deRooij, Steffen Hirsch, Kandasamy Ravi, James B Hicks,[...]. Science 2011
174
100


Variable readthrough responsiveness of nonsense mutations in hemophilia A.
Lluis Martorell, Vicente Cortina, Rafael Parra, Jordi Barquinero, Francisco Vidal. Haematologica 2020
7
100


Pharmaceutical therapies to recode nonsense mutations in inherited diseases.
Hui-Ling Rose Lee, Joseph P Dougherty. Pharmacol Ther 2012
96
100

Centrosome amplification and a defective G2-M cell cycle checkpoint induce genetic instability in BRCA1 exon 11 isoform-deficient cells.
X Xu, Z Weaver, S P Linke, C Li, J Gotay, X W Wang, C C Harris, T Ried, C X Deng. Mol Cell 1999
671
100

Gentamicin-induced correction of CFTR function in patients with cystic fibrosis and CFTR stop mutations.
Michael Wilschanski, Yaacov Yahav, Yasmin Yaacov, Hannah Blau, Lea Bentur, Joseph Rivlin, Micha Aviram, Tali Bdolah-Abram, Zsuzsa Bebok, Liat Shushi,[...]. N Engl J Med 2003
380
100

RAP80 targets BRCA1 to specific ubiquitin structures at DNA damage sites.
Bijan Sobhian, Genze Shao, Dana R Lilli, Aedín C Culhane, Lisa A Moreau, Bing Xia, David M Livingston, Roger A Greenberg. Science 2007
529
100

Abraxas and RAP80 form a BRCA1 protein complex required for the DNA damage response.
Bin Wang, Shuhei Matsuoka, Bryan A Ballif, Dong Zhang, Agata Smogorzewska, Steven P Gygi, Stephen J Elledge. Science 2007
540
100


Effect of small molecule eRF3 degraders on premature termination codon readthrough.
Alireza Baradaran-Heravi, Aruna D Balgi, Sara Hosseini-Farahabadi, Kunho Choi, Cristina Has, Michel Roberge. Nucleic Acids Res 2021
15
100

Gentamicin-induced readthrough of stop codons in Duchenne muscular dystrophy.
Vinod Malik, Louise R Rodino-Klapac, Laurence Viollet, Cheryl Wall, Wendy King, Roula Al-Dahhak, Sarah Lewis, Christopher J Shilling, Janaiah Kota, Carmen Serrano-Munuera,[...]. Ann Neurol 2010
193
100


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.