A citation-based method for searching scientific literature

Nasim Vahabi, George Michailidis. Front Genet 2022
Times Cited: 3







List of co-cited articles
articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Computational Methods for Drug Repurposing.
Rosaria Valentina Rapicavoli, Salvatore Alaimo, Alfredo Ferro, Alfredo Pulvirenti. Adv Exp Med Biol 2022
4
33

Drug Repurposing Strategy (DRS): Emerging Approach to Identify Potential Therapeutics for Treatment of Novel Coronavirus Infection.
Biswa Mohan Sahoo, B V V Ravi Kumar, J Sruti, Manoj Kumar Mahapatra, Bimal K Banik, Preetismita Borah. Front Mol Biosci 2021
16
33

The potential applications of artificial intelligence in drug discovery and development.
H Farghali, N Kutinová Canová, M Arora. Physiol Res 2021
3
33

Contribution of machine learning approaches in response to SARS-CoV-2 infection.
Mohammad Sadeq Mottaqi, Fatemeh Mohammadipanah, Hedieh Sajedi. Inform Med Unlocked 2021
15
33

Artificial intelligence in early drug discovery enabling precision medicine.
Fabio Boniolo, Emilio Dorigatti, Alexander J Ohnmacht, Dieter Saur, Benjamin Schubert, Michael P Menden. Expert Opin Drug Discov 2021
8
33

Target identification among known drugs by deep learning from heterogeneous networks.
Xiangxiang Zeng, Siyi Zhu, Weiqiang Lu, Zehui Liu, Jin Huang, Yadi Zhou, Jiansong Fang, Yin Huang, Huimin Guo, Lang Li,[...]. Chem Sci 2020
87
33

UMAP-assisted K-means clustering of large-scale SARS-CoV-2 mutation datasets.
Yuta Hozumi, Rui Wang, Changchuan Yin, Guo-Wei Wei. Comput Biol Med 2021
17
33

PREDICT: a method for inferring novel drug indications with application to personalized medicine.
Assaf Gottlieb, Gideon Y Stein, Eytan Ruppin, Roded Sharan. Mol Syst Biol 2011
403
33

Immunopathogenesis and treatment of cytokine storm in COVID-19.
Jae Seok Kim, Jun Young Lee, Jae Won Yang, Keum Hwa Lee, Maria Effenberger, Wladimir Szpirt, Andreas Kronbichler, Jae Il Shin. Theranostics 2021
150
33


Repositioning of 8565 Existing Drugs for COVID-19.
Kaifu Gao, Duc Duy Nguyen, Jiahui Chen, Rui Wang, Guo-Wei Wei. J Phys Chem Lett 2020
50
33

On the Integration of In Silico Drug Design Methods for Drug Repurposing.
Eric March-Vila, Luca Pinzi, Noé Sturm, Annachiara Tinivella, Ola Engkvist, Hongming Chen, Giulio Rastelli. Front Pharmacol 2017
83
33

Genome-wide association studies for common diseases and complex traits.
Joel N Hirschhorn, Mark J Daly. Nat Rev Genet 2005
33

The continuing 2019-nCoV epidemic threat of novel coronaviruses to global health - The latest 2019 novel coronavirus outbreak in Wuhan, China.
David S Hui, Esam I Azhar, Tariq A Madani, Francine Ntoumi, Richard Kock, Osman Dar, Giuseppe Ippolito, Timothy D Mchugh, Ziad A Memish, Christian Drosten,[...]. Int J Infect Dis 2020
33

Artificial Intelligence, Big Data and Machine Learning Approaches in Precision Medicine & Drug Discovery.
Anuraj Nayarisseri, Ravina Khandelwal, Poonam Tanwar, Maddala Madhavi, Diksha Sharma, Garima Thakur, Alejandro Speck-Planche, Sanjeev Kumar Singh. Curr Drug Targets 2021
12
33

Genome, transcriptome and proteome: the rise of omics data and their integration in biomedical sciences.
Claudia Manzoni, Demis A Kia, Jana Vandrovcova, John Hardy, Nicholas W Wood, Patrick A Lewis, Raffaele Ferrari. Brief Bioinform 2018
246
33

Origin and evolution of pathogenic coronaviruses.
Jie Cui, Fang Li, Zheng-Li Shi. Nat Rev Microbiol 2019
33

MathDL: mathematical deep learning for D3R Grand Challenge 4.
Duc Duy Nguyen, Kaifu Gao, Menglun Wang, Guo-Wei Wei. J Comput Aided Mol Des 2020
31
33

Prediction of drug-target interaction networks from the integration of chemical and genomic spaces.
Yoshihiro Yamanishi, Michihiro Araki, Alex Gutteridge, Wataru Honda, Minoru Kanehisa. Bioinformatics 2008
523
33

Dimensionality reduction by UMAP to visualize physical and genetic interactions.
Michael W Dorrity, Lauren M Saunders, Christine Queitsch, Stanley Fields, Cole Trapnell. Nat Commun 2020
44
33

A Multi-Targeting Approach to Fight SARS-CoV-2 Attachment.
Luciano Pirone, Annarita Del Gatto, Sonia Di Gaetano, Michele Saviano, Domenica Capasso, Laura Zaccaro, Emilia Pedone. Front Mol Biosci 2020
16
33

Robust clustering of noisy high-dimensional gene expression data for patients subtyping.
Pietro Coretto, Angela Serra, Roberto Tagliaferri. Bioinformatics 2018
13
33

Drug repurposing: progress, challenges and recommendations.
Sudeep Pushpakom, Francesco Iorio, Patrick A Eyers, K Jane Escott, Shirley Hopper, Andrew Wells, Andrew Doig, Tim Guilliams, Joanna Latimer, Christine McNamee,[...]. Nat Rev Drug Discov 2019
33


Drug repositioning for dengue haemorrhagic fever by integrating multiple omics analyses.
Takayuki Amemiya, M Michael Gromiha, Katsuhisa Horimoto, Kazuhiko Fukui. Sci Rep 2019
15
33

Drug repositioning: a brief overview.
Jean-Pierre Jourdan, Ronan Bureau, Christophe Rochais, Patrick Dallemagne. J Pharm Pharmacol 2020
65
33

Artificial intelligence-driven drug repurposing and structural biology for SARS-CoV-2.
Kartikay Prasad, Vijay Kumar. Curr Res Pharmacol Drug Discov 2021
5
33

Evaluation of integrative clustering methods for the analysis of multi-omics data.
Cécile Chauvel, Alexei Novoloaca, Pierre Veyre, Frédéric Reynier, Jérémie Becker. Brief Bioinform 2020
29
33

Artificial intelligence approach fighting COVID-19 with repurposing drugs.
Yi-Yu Ke, Tzu-Ting Peng, Teng-Kuang Yeh, Wen-Zheng Huang, Shao-En Chang, Szu-Huei Wu, Hui-Chen Hung, Tsu-An Hsu, Shiow-Ju Lee, Jeng-Shin Song,[...]. Biomed J 2020
88
33

Similarity network fusion for aggregating data types on a genomic scale.
Bo Wang, Aziz M Mezlini, Feyyaz Demir, Marc Fiume, Zhuowen Tu, Michael Brudno, Benjamin Haibe-Kains, Anna Goldenberg. Nat Methods 2014
706
33

Deep learning for inferring gene relationships from single-cell expression data.
Ye Yuan, Ziv Bar-Joseph. Proc Natl Acad Sci U S A 2019
54
33

Interpreting patterns of gene expression with self-organizing maps: methods and application to hematopoietic differentiation.
P Tamayo, D Slonim, J Mesirov, Q Zhu, S Kitareewan, E Dmitrovsky, E S Lander, T R Golub. Proc Natl Acad Sci U S A 1999
33


Modified linear regression predicts drug-target interactions accurately.
Krisztian Buza, Ladislav Peška, Júlia Koller. PLoS One 2020
4
33

A Novel Coronavirus from Patients with Pneumonia in China, 2019.
Na Zhu, Dingyu Zhang, Wenling Wang, Xingwang Li, Bo Yang, Jingdong Song, Xiang Zhao, Baoying Huang, Weifeng Shi, Roujian Lu,[...]. N Engl J Med 2020
33

Review: Cytokine Storm Syndrome: Looking Toward the Precision Medicine Era.
Edward M Behrens, Gary A Koretzky. Arthritis Rheumatol 2017
156
33

Multi-omic and multi-view clustering algorithms: review and cancer benchmark.
Nimrod Rappoport, Ron Shamir. Nucleic Acids Res 2018
145
33

The Connectivity Map: using gene-expression signatures to connect small molecules, genes, and disease.
Justin Lamb, Emily D Crawford, David Peck, Joshua W Modell, Irene C Blat, Matthew J Wrobel, Jim Lerner, Jean-Philippe Brunet, Aravind Subramanian, Kenneth N Ross,[...]. Science 2006
33

Baricitinib as potential treatment for 2019-nCoV acute respiratory disease.
Peter Richardson, Ivan Griffin, Catherine Tucker, Dan Smith, Olly Oechsle, Anne Phelan, Michael Rawling, Edward Savory, Justin Stebbing. Lancet 2020
801
33

Remdesivir for the Treatment of Covid-19 - Final Report.
John H Beigel, Kay M Tomashek, Lori E Dodd, Aneesh K Mehta, Barry S Zingman, Andre C Kalil, Elizabeth Hohmann, Helen Y Chu, Annie Luetkemeyer, Susan Kline,[...]. N Engl J Med 2020
33

Multiplatform analysis of 12 cancer types reveals molecular classification within and across tissues of origin.
Katherine A Hoadley, Christina Yau, Denise M Wolf, Andrew D Cherniack, David Tamborero, Sam Ng, Max D M Leiserson, Beifang Niu, Michael D McLellan, Vladislav Uzunangelov,[...]. Cell 2014
893
33



A novel multiseed nonhierarchical data clustering technique.
D Chaudhuri, B B Chaudhuri. IEEE Trans Syst Man Cybern B Cybern 1997
4
33


In silico drug repurposing in COVID-19: A network-based analysis.
Pasquale Sibilio, Simone Bini, Giulia Fiscon, Marialuisa Sponziello, Federica Conte, Valeria Pecce, Cosimo Durante, Paola Paci, Rosa Falcone, Giuseppe Danilo Norata,[...]. Biomed Pharmacother 2021
5
33

How does gene expression clustering work?
Patrik D'haeseleer. Nat Biotechnol 2005
262
33

Supervised prediction of drug-target interactions using bipartite local models.
Kevin Bleakley, Yoshihiro Yamanishi. Bioinformatics 2009
315
33




Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.