A citation-based method for searching scientific literature

Amy L Bowes, Maxime Tarabichi, Nischalan Pillay, Peter Van Loo. J Pathol 2022
Times Cited: 2







List of co-cited articles
articles co-cited >1



Times Cited
  Times     Co-cited
Similarity



'Know thyself' - host factors influencing cancer response to immune checkpoint inhibitors.
Ashray Gunjur, Andrea J Manrique-Rincón, Oliver Klein, Andreas Behren, Trevor D Lawley, Sarah J Welsh, David J Adams. J Pathol 2022
1
100

An overview of mutational and copy number signatures in human cancer.
Christopher D Steele, Nischalan Pillay, Ludmil B Alexandrov. J Pathol 2022
1
100



Lineage tracing in human tissues.
Calum Gabbutt, Nicholas A Wright, Ann-Marie Baker, Darryl Shibata, Trevor A Graham. J Pathol 2022
1
100

The state of the art for artificial intelligence in lung digital pathology.
Vidya Sankar Viswanathan, Paula Toro, Germán Corredor, Sanjay Mukhopadhyay, Anant Madabhushi. J Pathol 2022
3
50

Artificial intelligence to identify genetic alterations in conventional histopathology.
Didem Cifci, Sebastian Foersch, Jakob Nikolas Kather. J Pathol 2022
7
50


Cancer-associated fibroblasts in pancreatic cancer: new subtypes, new markers, new targets.
Shinelle Menezes, Mohamed Hazem Okail, Siti Munira Abd Jalil, Hemant M Kocher, Angus J M Cameron. J Pathol 2022
6
50

High-throughput whole-slide scanning to enable large-scale data repository building.
Mark D Zarella, Keysabelis Rivera Alvarez. J Pathol 2022
1
100

Field cancerization in breast cancer.
Emanuela Gadaleta, Graeme J Thorn, Helen Ross-Adams, Louise J Jones, Claude Chelala. J Pathol 2022
1
100

Reconstructing the epidermal proteolytic cascades in health and disease.
Georgia Sotiropoulou, Eleni Zingkou, Georgios Pampalakis. J Pathol 2022
3
50


Phenotype switching: tumor cell plasticity as a resistance mechanism and target for therapy.
Kristel Kemper, Pauline L de Goeje, Daniel S Peeper, Renée van Amerongen. Cancer Res 2014
139
50

Distant Metastasis in Colorectal Cancer Patients-Do We Have New Predicting Clinicopathological and Molecular Biomarkers? A Comprehensive Review.
Stanislav Filip, Veronika Vymetalkova, Jiri Petera, Ludmila Vodickova, Ondrej Kubecek, Stanislav John, Filip Cecka, Marketa Krupova, Monika Manethova, Klara Cervena,[...]. Int J Mol Sci 2020
24
50

A practical guide to cancer subclonal reconstruction from DNA sequencing.
Maxime Tarabichi, Adriana Salcedo, Amit G Deshwar, Máire Ni Leathlobhair, Jeff Wintersinger, David C Wedge, Peter Van Loo, Quaid D Morris, Paul C Boutros. Nat Methods 2021
39
50

Cycling cancer persister cells arise from lineages with distinct programs.
Yaara Oren, Michael Tsabar, Michael S Cuoco, Liat Amir-Zilberstein, Heidie F Cabanos, Jan-Christian Hütter, Bomiao Hu, Pratiksha I Thakore, Marcin Tabaka, Charles P Fulco,[...]. Nature 2021
79
50

phylodyn: an R package for phylodynamic simulation and inference.
Michael D Karcher, Julia A Palacios, Shiwei Lan, Vladimir N Minin. Mol Ecol Resour 2017
28
50

Targeting enhancer switching overcomes non-genetic drug resistance in acute myeloid leukaemia.
Charles C Bell, Katie A Fennell, Yih-Chih Chan, Florian Rambow, Miriam M Yeung, Dane Vassiliadis, Luis Lara, Paul Yeh, Luciano G Martelotto, Aljosja Rogiers,[...]. Nat Commun 2019
80
50

Effect on outcome of recurrence patterns after hepatectomy for colorectal metastases.
Michael D'Angelica, Peter Kornprat, Mithat Gonen, Ronald P DeMatteo, Yuman Fong, Leslie H Blumgart, William R Jarnagin. Ann Surg Oncol 2011
122
50

ANNOVAR: functional annotation of genetic variants from high-throughput sequencing data.
Kai Wang, Mingyao Li, Hakon Hakonarson. Nucleic Acids Res 2010
50

CC2D1A and CC2D1B regulate degradation and signaling of EGFR and TLR4.
Rakesh Deshar, Eun-Bee Cho, Sungjoo Kim Yoon, Jong-Bok Yoon. Biochem Biophys Res Commun 2016
7
50

Tumour heterogeneity and evolutionary dynamics in colorectal cancer.
Dedrick Kok Hong Chan, Simon James Alexander Buczacki. Oncogenesis 2021
9
50

Modeling colorectal cancer evolution.
Atsushi Niida, Koshi Mimori, Tatsuhiro Shibata, Satoru Miyano. J Hum Genet 2021
5
50

Whole exome and transcriptome sequencing reveal clonal evolution and exhibit immune-related features in metastatic colorectal tumors.
Chunxue Li, Juan Xu, Xiangfeng Wang, Chao Zhang, Zicheng Yu, Jiucheng Liu, Zaixian Tai, Ziwen Luo, Xin Yi, Zhaoyang Zhong. Cell Death Discov 2021
6
50

A community effort to create standards for evaluating tumor subclonal reconstruction.
Adriana Salcedo, Maxime Tarabichi, Shadrielle Melijah G Espiritu, Amit G Deshwar, Matei David, Nathan M Wilson, Stefan Dentro, Jeff A Wintersinger, Lydia Y Liu, Minjeong Ko,[...]. Nat Biotechnol 2020
33
50

Rare cell variability and drug-induced reprogramming as a mode of cancer drug resistance.
Sydney M Shaffer, Margaret C Dunagin, Stefan R Torborg, Eduardo A Torre, Benjamin Emert, Clemens Krepler, Marilda Beqiri, Katrin Sproesser, Patricia A Brafford, Min Xiao,[...]. Nature 2017
517
50

Origins of lymphatic and distant metastases in human colorectal cancer.
Kamila Naxerova, Johannes G Reiter, Elena Brachtel, Jochen K Lennerz, Marc van de Wetering, Andrew Rowan, Tianxi Cai, Hans Clevers, Charles Swanton, Martin A Nowak,[...]. Science 2017
250
50


Rapid evolution and biogeographic spread in a colorectal cancer.
Joao M Alves, Sonia Prado-López, José Manuel Cameselle-Teijeiro, David Posada. Nat Commun 2019
26
50

Whole genome sequencing puts forward hypotheses on metastasis evolution and therapy in colorectal cancer.
Naveed Ishaque, Mohammed L Abba, Christine Hauser, Nitin Patil, Nagarajan Paramasivam, Daniel Huebschmann, Jörg Hendrik Leupold, Gnana Prakash Balasubramanian, Kortine Kleinheinz, Umut H Toprak,[...]. Nat Commun 2018
63
50

Single-cell DNA-seq depicts clonal evolution of multiple driver alterations in osimertinib-resistant patients.
J Chen, F Facchinetti, F Braye, A A Yurchenko, L Bigot, S Ponce, D Planchard, A Gazzah, S Nikolaev, S Michiels,[...]. Ann Oncol 2022
2
50

Comparative lesion sequencing provides insights into tumor evolution.
Siân Jones, Wei-Dong Chen, Giovanni Parmigiani, Frank Diehl, Niko Beerenwinkel, Tibor Antal, Arne Traulsen, Martin A Nowak, Christopher Siegel, Victor E Velculescu,[...]. Proc Natl Acad Sci U S A 2008
574
50

Implementing anti-epidermal growth factor receptor (EGFR) therapy in metastatic colorectal cancer: challenges and future perspectives.
E Martinelli, D Ciardiello, G Martini, T Troiani, C Cardone, P P Vitiello, N Normanno, A M Rachiglio, E Maiello, T Latiano,[...]. Ann Oncol 2020
63
50

Non-genetic mechanisms of therapeutic resistance in cancer.
Jean-Christophe Marine, Sarah-Jane Dawson, Mark A Dawson. Nat Rev Cancer 2020
138
50

Evolutionary predictability of genetic versus nongenetic resistance to anticancer drugs in melanoma.
Oskar Marin-Bejar, Aljosja Rogiers, Michael Dewaele, Julia Femel, Panagiotis Karras, Joanna Pozniak, Greet Bervoets, Nina Van Raemdonck, Dennis Pedri, Toon Swings,[...]. Cancer Cell 2021
32
50

Genomic evolution and diverse models of systemic metastases in colorectal cancer.
Hai-Ning Chen, Yang Shu, Fei Liao, Xue Liao, Hongying Zhang, Yun Qin, Zhu Wang, Maochao Luo, Qiuluo Liu, Zhinan Xue,[...]. Gut 2022
25
50

Chemoresistance Evolution in Triple-Negative Breast Cancer Delineated by Single-Cell Sequencing.
Charissa Kim, Ruli Gao, Emi Sei, Rachel Brandt, Johan Hartman, Thomas Hatschek, Nicola Crosetto, Theodoros Foukakis, Nicholas E Navin. Cell 2018
437
50

Malignant transformation and genetic alterations are uncoupled in early colorectal cancer progression.
Soulafa Mamlouk, Tincy Simon, Laura Tomás, David C Wedge, Alexander Arnold, Andrea Menne, David Horst, David Capper, Markus Morkel, David Posada,[...]. BMC Biol 2020
4
50

Diverse drug-resistance mechanisms can emerge from drug-tolerant cancer persister cells.
Michael Ramirez, Satwik Rajaram, Robert J Steininger, Daria Osipchuk, Maike A Roth, Leanna S Morinishi, Louise Evans, Weiyue Ji, Chien-Hsiang Hsu, Kevin Thurley,[...]. Nat Commun 2016
285
50


IL-23 directly enhances the proliferative and invasive activities of colorectal carcinoma.
Hideyuki Suzuki, Hitoshi Ogawa, Koh Miura, Sho Haneda, Kazuhiro Watanabe, Shinobu Ohnuma, Hiroyuki Sasaki, Tomohiko Sase, Shunichi Kimura, Taiki Kajiwara,[...]. Oncol Lett 2012
22
50

The Evolutionary Origins of Recurrent Pancreatic Cancer.
Hitomi Sakamoto, Marc A Attiyeh, Jeffrey M Gerold, Alvin P Makohon-Moore, Akimasa Hayashi, Jungeui Hong, Rajya Kappagantula, Lance Zhang, Jerry P Melchor, Johannes G Reiter,[...]. Cancer Discov 2020
47
50

Genetic and non-genetic clonal diversity in cancer evolution.
James R M Black, Nicholas McGranahan. Nat Rev Cancer 2021
51
50


The mutational footprints of cancer therapies.
Oriol Pich, Ferran Muiños, Martijn Paul Lolkema, Neeltje Steeghs, Abel Gonzalez-Perez, Nuria Lopez-Bigas. Nat Genet 2019
107
50

Minimal barriers to invasion during human colorectal tumor growth.
Marc D Ryser, Diego Mallo, Allison Hall, Timothy Hardman, Lorraine M King, Sergei Tatishchev, Inmaculada C Sorribes, Carlo C Maley, Jeffrey R Marks, E Shelley Hwang,[...]. Nat Commun 2020
17
50

Power and pitfalls of computational methods for inferring clone phylogenies and mutation orders from bulk sequencing data.
Sayaka Miura, Tracy Vu, Jiamin Deng, Tiffany Buturla, Olumide Oladeinde, Jiyeong Choi, Sudhir Kumar. Sci Rep 2020
13
50

Accurate identification of single-nucleotide variants in whole-genome-amplified single cells.
Xiao Dong, Lei Zhang, Brandon Milholland, Moonsook Lee, Alexander Y Maslov, Tao Wang, Jan Vijg. Nat Methods 2017
108
50


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.