A citation-based method for searching scientific literature

Spencer C Ding, Y M Dennis Lo. Diagnostics (Basel) 2022
Times Cited: 1







List of co-cited articles
articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Accumulation of genetic and epigenetic alterations in normal cells and cancer risk.
Hideyuki Takeshima, Toshikazu Ushijima. NPJ Precis Oncol 2019
72
100

Circulating tumor DNA analysis depicts subclonal architecture and genomic evolution of small cell lung cancer.
Jingying Nong, Yuhua Gong, Yanfang Guan, Xin Yi, Yuting Yi, Lianpeng Chang, Ling Yang, Jialin Lv, Zhirong Guo, Hongyan Jia,[...]. Nat Commun 2018
85
100

A plasma telomeric cell-free DNA level in unaffected women with BRCA1 or/and BRCA2 mutations: a pilot study.
Shatovisha Dey, Natascia Marino, Kanokwan Bishop, Paige N Dahlgren, Aditi Shendre, Anna Maria Storniolo, Chunyan He, Hiromi Tanaka. Oncotarget 2017
2
100


Assessing aneuploidy with repetitive element sequencing.
Christopher Douville, Joshua D Cohen, Janine Ptak, Maria Popoli, Joy Schaefer, Natalie Silliman, Lisa Dobbyn, Robert E Schoen, Jeanne Tie, Peter Gibbs,[...]. Proc Natl Acad Sci U S A 2020
29
100

Landscape of Microsatellite Instability Across 39 Cancer Types.
Russell Bonneville, Melanie A Krook, Esko A Kautto, Jharna Miya, Michele R Wing, Hui-Zi Chen, Julie W Reeser, Lianbo Yu, Sameek Roychowdhury. JCO Precis Oncol 2017
437
100

Limited Utility of Circulating Cell-Free DNA Integrity as a Diagnostic Tool for Differentiating Between Malignant and Benign Thyroid Nodules With Indeterminate Cytology (Bethesda Category III).
Shilpa Thakur, Andrew Tobey, Brianna Daley, Sungyoung Auh, Mary Walter, Dhaval Patel, Naris Nilubol, Electron Kebebew, Aneeta Patel, Kirk Jensen,[...]. Front Oncol 2019
7
100

Quantification of LINE1 in circulating DNA as a molecular biomarker of breast cancer.
Eiji Sunami, Anh-Thu Vu, Sandy L Nguyen, Armando E Giuliano, Dave S B Hoon. Ann N Y Acad Sci 2008
64
100

Circulating cell-free DNA integrity as a diagnostic and prognostic marker for breast and prostate cancers.
Benjamin Arko-Boham, Nii Ayite Aryee, Richard Michael Blay, Ewurama Dedea Ampadu Owusu, Emmanuel Ayitey Tagoe, Eshirow-Sam Doris Shackie, Ama Boatemaa Debrah, Nii Armah Adu-Aryee. Cancer Genet 2019
25
100

Circulating free DNA integrity and concentration as independent prognostic markers in metastatic breast cancer.
Jie Cheng, Tim Holland-Letz, Markus Wallwiener, Harald Surowy, Katarina Cuk, Sarah Schott, Andreas Trumpp, Klaus Pantel, Christof Sohn, Andreas Schneeweiss,[...]. Breast Cancer Res Treat 2018
36
100

Reduced Serum Circulation of Cell-Free DNA Following Chemotherapy in Breast Cancer Patients.
Evelyn Adusei, John Ahenkorah, Nii Armah Adu-Aryee, Kevin Kofi Adutwum-Ofosu, Emmanuel Ayitey Tagoe, Nii Koney-Kwaku Koney, Emmanuel Nkansah, Nii Ayite Aryee, Richard Michael Blay, Bismarck Afedo Hottor,[...]. Med Sci (Basel) 2021
1
100

Circulating mutant DNA to assess tumor dynamics.
Frank Diehl, Kerstin Schmidt, Michael A Choti, Katharine Romans, Steven Goodman, Meng Li, Katherine Thornton, Nishant Agrawal, Lori Sokoll, Steve A Szabo,[...]. Nat Med 2008
100

The Biology of Cell-free DNA Fragmentation and the Roles of DNASE1, DNASE1L3, and DFFB.
Diana S C Han, Meng Ni, Rebecca W Y Chan, Vicken W H Chan, Kathy O Lui, Rossa W K Chiu, Y M Dennis Lo. Am J Hum Genet 2020
55
100

Microsatellite instability typing in serum and tissue of patients with colorectal cancer: comparing real time PCR with hybridization probe and high-performance liquid chromatography.
P Mokarram, M Rismanchi, M Alizadeh Naeeni, S Mirab Samiee, M Paryan, A Alipour, Z Honardar, S Kavousipour, F Naghibalhossaini, Z Mostafavi-Pour,[...]. Mol Biol Rep 2014
14
100

Microsatellite alterations and TP53 mutations in plasma DNA of small-cell lung cancer patients: follow-up study and prognostic significance.
R Gonzalez, J M Silva, A Sanchez, G Dominguez, J M Garcia, X Q Chen, M Stroun, M Provencio, P España, P Anker,[...]. Ann Oncol 2000
68
100

Pericentromeric satellite repeat expansions through RNA-derived DNA intermediates in cancer.
Francesca Bersani, Eunjung Lee, Peter V Kharchenko, Andrew W Xu, Mingzhu Liu, Kristina Xega, Olivia C MacKenzie, Brian W Brannigan, Ben S Wittner, Hyunchul Jung,[...]. Proc Natl Acad Sci U S A 2015
91
100

Integrity of plasma cell-free DNA as a prognostic factor for vaccine therapy in patients with endometrial cancer.
Kayoko Waki, Kanako Yokomizo, Kouichiro Kawano, Naotake Tsuda, Nobukazu Komatsu, Akira Yamada. Mol Clin Oncol 2021
2
100

Telomere Length of Circulating Cell-Free DNA and Gastric Cancer in a Chinese Population at High-Risk.
Yu Shi, Yang Zhang, Lian Zhang, Jun-Ling Ma, Tong Zhou, Zhe-Xuan Li, Wei-Dong Liu, Wen-Qing Li, Da-Jun Deng, Wei-Cheng You,[...]. Front Oncol 2019
2
100

Satellite DNA-mediated effects on genome regulation.
Z Pezer, J Brajković, I Feliciello, D Ugarkovć. Genome Dyn 2012
53
100


Alu and LINE-1 hypomethylation is associated with HER2 enriched subtype of breast cancer.
So Yeon Park, An Na Seo, Hae Yoen Jung, Jae Moon Gwak, Namhee Jung, Nam-Yun Cho, Gyeong Hoon Kang. PLoS One 2014
49
100

Size distribution of circulating cell-free DNA in sera of breast cancer patients in the course of adjuvant chemotherapy.
Ugur Deligezer, Yesim Eralp, Ebru E Akisik, Elif Z Akisik, Pinar Saip, Erkan Topuz, Nejat Dalay. Clin Chem Lab Med 2008
35
100

Detection and localization of surgically resectable cancers with a multi-analyte blood test.
Joshua D Cohen, Lu Li, Yuxuan Wang, Christopher Thoburn, Bahman Afsari, Ludmila Danilova, Christopher Douville, Ammar A Javed, Fay Wong, Austin Mattox,[...]. Science 2018
100

LINE-1 hypomethylation status of circulating cell-free DNA in plasma as a biomarker for colorectal cancer.
Yuzo Nagai, Eiji Sunami, Yoko Yamamoto, Keisuke Hata, Satoshi Okada, Koji Murono, Koji Yasuda, Kensuke Otani, Takeshi Nishikawa, Toshiaki Tanaka,[...]. Oncotarget 2017
46
100

Increased DNA integrity in colorectal cancer.
Gloria Leszinski, Julia Lehner, Ugur Gezer, Stefan Holdenrieder. In Vivo 2014
19
100

Assessment of DNA Integrity, Applications for Cancer Research.
Eleonora Zonta, Philippe Nizard, Valérie Taly. Adv Clin Chem 2015
30
100


Evaluation of pre-analytical factors affecting plasma DNA analysis.
Havell Markus, Tania Contente-Cuomo, Maria Farooq, Winnie S Liang, Mitesh J Borad, Shivan Sivakumar, Simon Gollins, Nhan L Tran, Harshil D Dhruv, Michael E Berens,[...]. Sci Rep 2018
68
100

Prognostic and predictive significance of long interspersed nucleotide element-1 methylation in advanced-stage colorectal cancer.
Mami Kaneko, Masanori Kotake, Hiroyuki Bando, Tetsuji Yamada, Hirofumi Takemura, Toshinari Minamoto. BMC Cancer 2016
14
100

Serum LINE-1 hypomethylation as a potential prognostic marker for hepatocellular carcinoma.
Pisit Tangkijvanich, Nusara Hourpai, Prakasit Rattanatanyong, Naruemon Wisedopas, Varocha Mahachai, Apiwat Mutirangura. Clin Chim Acta 2007
94
100

Cell-free DNA integrity for the monitoring of breast cancer: Future perspectives?
Navid Sobhani, Daniele Generali, Fabrizio Zanconati, Marina Bortul, Bruna Scaggiante. World J Clin Oncol 2018
13
100

The impact of retrotransposons on human genome evolution.
Richard Cordaux, Mark A Batzer. Nat Rev Genet 2009
993
100


Early detection of cancer using circulating tumor DNA: biological, physiological and analytical considerations.
Abel Jacobus Bronkhorst, Vida Ungerer, Stefan Holdenrieder. Crit Rev Clin Lab Sci 2019
15
100

Alu-based cell-free DNA: a novel biomarker for screening of gastric cancer.
Chen Qian, Shaoqing Ju, Jing Qi, Jianmei Zhao, Xianjuan Shen, Rongrong Jing, Juan Yu, Li Li, Yingjuan Shi, Lurong Zhang,[...]. Oncotarget 2016
13
100

Liquid Biopsies: Applications for Cancer Diagnosis and Monitoring.
Ivana Martins, Ilda Patrícia Ribeiro, Joana Jorge, Ana Cristina Gonçalves, Ana Bela Sarmento-Ribeiro, Joana Barbosa Melo, Isabel Marques Carreira. Genes (Basel) 2021
24
100

Towards systematic nomenclature for cell-free DNA.
Abel J Bronkhorst, Vida Ungerer, Frank Diehl, Philippe Anker, Yuval Dor, Michael Fleischhacker, Peter B Gahan, Lisa Hui, Stefan Holdenrieder, Alain R Thierry. Hum Genet 2021
14
100

PCR amplification of repetitive DNA: a limitation to genome editing technologies and many other applications.
Carl Maximilian Hommelsheim, Lamprinos Frantzeskakis, Mengmeng Huang, Bekir Ülker. Sci Rep 2014
51
100

Circulating nucleic acids (CNAs) and cancer--a survey.
M Fleischhacker, B Schmidt. Biochim Biophys Acta 2007
609
100

Circulating cell-free DNA is predominantly composed of retrotransposable elements and non-telomeric satellite DNA.
Stefan Grabuschnig, Jung Soh, Petra Heidinger, Thorsten Bachler, Elisabeth Hirschböck, Ingund Rosales Rodriguez, Daniel Schwendenwein, Christoph W Sensen. J Biotechnol 2020
7
100

Evaluation of serum LINE-1 hypomethylation as a prognostic marker for hepatocellular carcinoma.
Iman I Ramzy, Dalia A Omran, Osama Hamad, Olfat Shaker, Alaa Abboud. Arab J Gastroenterol 2011
14
100

Serum circulating cell free DNA as potential diagnostic and prognostic biomarker in non small cell lung cancer.
Shimaa El-Shafey Soliman, Alshimaa Mahmoud Alhanafy, Mona Salah El-Din Habib, Mohamed Hagag, Reda Abdel Latif Ibrahem. Biochem Biophys Rep 2018
24
100

Clinical activity of pembrolizumab in metastatic prostate cancer with microsatellite instability high (MSI-H) detected by circulating tumor DNA.
Pedro Barata, Neeraj Agarwal, Roberto Nussenzveig, Benjamin Gerendash, Ellen Jaeger, Whitley Hatton, Elisa Ledet, Brian Lewis, Jodi Layton, Hani Babiker,[...]. J Immunother Cancer 2020
32
100

Initial sequencing and analysis of the human genome.
E S Lander, L M Linton, B Birren, C Nusbaum, M C Zody, J Baldwin, K Devon, K Dewar, M Doyle, W FitzHugh,[...]. Nature 2001
100

The diverse origins of circulating cell-free DNA in the human body: a critical re-evaluation of the literature.
Janine Aucamp, Abel J Bronkhorst, Christoffel P S Badenhorst, Piet J Pretorius. Biol Rev Camb Philos Soc 2018
112
100

Putative Origins of Cell-Free DNA in Humans: A Review of Active and Passive Nucleic Acid Release Mechanisms.
Stefan Grabuschnig, Abel Jacobus Bronkhorst, Stefan Holdenrieder, Ingund Rosales Rodriguez, Klaus Peter Schliep, Daniel Schwendenwein, Vida Ungerer, Christoph Wilhelm Sensen. Int J Mol Sci 2020
29
100

Comparison of methods for circulating cell-free DNA isolation using blood from cancer patients: impact on biomarker testing.
Clara Pérez-Barrios, Irene Nieto-Alcolado, María Torrente, Carolina Jiménez-Sánchez, Virginia Calvo, Lourdes Gutierrez-Sanz, Magda Palka, Encarnación Donoso-Navarro, Mariano Provencio, Atocha Romero. Transl Lung Cancer Res 2016
81
100

Cell-free DNA analysis in current cancer clinical trials: a review.
M Cisneros-Villanueva, L Hidalgo-Pérez, M Rios-Romero, A Cedro-Tanda, C A Ruiz-Villavicencio, K Page, R Hastings, D Fernandez-Garcia, R Allsopp, M A Fonseca-Montaño,[...]. Br J Cancer 2022
5
100

Transcriptional landscape of repetitive elements in normal and cancer human cells.
Steven W Criscione, Yue Zhang, William Thompson, John M Sedivy, Nicola Neretti. BMC Genomics 2014
145
100



Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.