A citation-based method for searching scientific literature

Zhijian Yang, Yang Ni, Zebin Lin, Liubin Yang, Guotai Chen, Nuerla Nijiati, Yunzhuo Hu, Xuanyang Chen. BMC Plant Biol 2022
Times Cited: 1







List of co-cited articles
articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Ginkgo and Welwitschia Mitogenomes Reveal Extreme Contrasts in Gymnosperm Mitochondrial Evolution.
Wenhu Guo, Felix Grewe, Weishu Fan, Gregory J Young, Volker Knoop, Jeffrey D Palmer, Jeffrey P Mower. Mol Biol Evol 2016
79
100



A single base change prevents import of cytosolic tRNA(Ala) into mitochondria in transgenic plants.
A Dietrich, L Maréchal-Drouard, V Carneiro, A Cosset, I Small. Plant J 1996
47
100

Rearrangement and domestication as drivers of Rosaceae mitogenome plasticity.
Manyi Sun, Mingyue Zhang, Xuening Chen, Yueyuan Liu, Binbin Liu, Jiaming Li, Runze Wang, Kejiao Zhao, Jun Wu. BMC Biol 2022
1
100

Correlation between Ka/Ks and Ks is related to substitution model and evolutionary lineage.
Jun Li, Zhang Zhang, Søren Vang, Jun Yu, Gane Ka-Shu Wong, Jun Wang. J Mol Evol 2009
46
100

RNA Editing in Mitochondria and Plastids: Weird and Widespread.
Julius Lukeš, Binnypreet Kaur, Dave Speijer. Trends Genet 2021
10
100





High speed BLASTN: an accelerated MegaBLAST search tool.
Ying Chen, Weicai Ye, Yongdong Zhang, Yuesheng Xu. Nucleic Acids Res 2015
133
100

de novo assembly and population genomic survey of natural yeast isolates with the Oxford Nanopore MinION sequencer.
Benjamin Istace, Anne Friedrich, Léo d'Agata, Sébastien Faye, Emilie Payen, Odette Beluche, Claudia Caradec, Sabrina Davidas, Corinne Cruaud, Gianni Liti,[...]. Gigascience 2017
92
100

Rapid evolution of enormous, multichromosomal genomes in flowering plant mitochondria with exceptionally high mutation rates.
Daniel B Sloan, Andrew J Alverson, John P Chuckalovcak, Martin Wu, David E McCauley, Jeffrey D Palmer, Douglas R Taylor. PLoS Biol 2012
295
100


MISA-web: a web server for microsatellite prediction.
Sebastian Beier, Thomas Thiel, Thomas Münch, Uwe Scholz, Martin Mascher. Bioinformatics 2017
523
100


Unique Mitochondrial Single Nucleotide Polymorphisms Demonstrate Resolution Potential to Discriminate Theileria parva Vaccine and Buffalo-Derived Strains.
Micky M Mwamuye, Isaiah Obara, Khawla Elati, David Odongo, Mohammed A Bakheit, Frans Jongejan, Ard M Nijhof. Life (Basel) 2020
3
100

A manually annotated Actinidia chinensis var. chinensis (kiwifruit) genome highlights the challenges associated with draft genomes and gene prediction in plants.
Sarah M Pilkington, Ross Crowhurst, Elena Hilario, Simona Nardozza, Lena Fraser, Yongyan Peng, Kularajathevan Gunaseelan, Robert Simpson, Jibran Tahir, Simon C Deroles,[...]. BMC Genomics 2018
77
100

Analysis of the Complete Mitochondrial Genome Sequence of the Diploid Cotton Gossypium raimondii by Comparative Genomics Approaches.
Changwei Bi, Andrew H Paterson, Xuelin Wang, Yiqing Xu, Dongyang Wu, Yanshu Qu, Anna Jiang, Qiaolin Ye, Ning Ye. Biomed Res Int 2016
27
100

High and Variable Rates of Repeat-Mediated Mitochondrial Genome Rearrangement in a Genus of Plants.
Logan W Cole, Wenhu Guo, Jeffrey P Mower, Jeffrey D Palmer. Mol Biol Evol 2018
31
100

Decoding and analysis of organelle genomes of Indian tea (Camellia assamica) for phylogenetic confirmation.
Hukam C Rawal, P Mohan Kumar, Biswajit Bera, Nagendra Kumar Singh, Tapan Kumar Mondal. Genomics 2020
10
100

Mitochondria of protists.
Michael W Gray, B Franz Lang, Gertraud Burger. Annu Rev Genet 2004
212
100

Dynamic compartmentalization of base excision repair proteins in response to nuclear and mitochondrial oxidative stress.
Lyra M Griffiths, Dan Swartzlander, Kellen L Meadows, Keith D Wilkinson, Anita H Corbett, Paul W Doetsch. Mol Cell Biol 2009
36
100


Correction of Persistent Errors in Arabidopsis Reference Mitochondrial Genomes.
Daniel B Sloan, Zhiqiang Wu, Joel Sharbrough. Plant Cell 2018
46
100



A high-quality Actinidia chinensis (kiwifruit) genome.
Haolin Wu, Tao Ma, Minghui Kang, Fandi Ai, Junlin Zhang, Guanyong Dong, Jianquan Liu. Hortic Res 2019
49
100

NEBNext Direct: A Novel, Rapid, Hybridization-Based Approach for the Capture and Library Conversion of Genomic Regions of Interest.
Amy B Emerman, Sarah K Bowman, Andrew Barry, Noa Henig, Kruti M Patel, Andrew F Gardner, Cynthia L Hendrickson. Curr Protoc Mol Biol 2017
9
100

Using Apollo to browse and edit genome annotations.
Sima Misra, Nomi Harris. Curr Protoc Bioinformatics 2006
27
100

Chromosome-scale genome assembly of kiwifruit Actinidia eriantha with single-molecule sequencing and chromatin interaction mapping.
Wei Tang, Xuepeng Sun, Junyang Yue, Xiaofeng Tang, Chen Jiao, Ying Yang, Xiangli Niu, Min Miao, Danfeng Zhang, Shengxiong Huang,[...]. Gigascience 2019
36
100

MAFFT-DASH: integrated protein sequence and structural alignment.
John Rozewicki, Songling Li, Karlou Mar Amada, Daron M Standley, Kazutaka Katoh. Nucleic Acids Res 2019
224
100

The mitochondrial genome of Globodera ellingtonae is composed of two circles with segregated gene content and differential copy numbers.
Wendy S Phillips, Amanda M V Brown, Dana K Howe, Amy B Peetz, Vivian C Blok, Dee R Denver, Inga A Zasada. BMC Genomics 2016
19
100


The first mitochondrial genomes of endosymbiotic rhabdocoels illustrate evolutionary relaxation of atp8 and genome plasticity in flatworms.
Marlies Monnens, Sofie Thijs, Andrew G Briscoe, Miriam Clark, Emily Joy Frost, D Tim J Littlewood, Mary Sewell, Karen Smeets, Tom Artois, Maarten P M Vanhove. Int J Biol Macromol 2020
11
100



Plant mitochondrial DNA.
Stewart A Morley, Brent L Nielsen. Front Biosci (Landmark Ed) 2017
32
100

Assembly and comparative analysis of complete mitochondrial genome sequence of an economic plant Salix suchowensis.
Ning Ye, Xuelin Wang, Juan Li, Changwei Bi, Yiqing Xu, Dongyang Wu, Qiaolin Ye. PeerJ 2017
26
100

Mitochondrial evolution.
M W Gray, G Burger, B F Lang. Science 1999
100

Pacbio Sequencing Reveals Identical Organelle Genomes between American Cranberry (Vaccinium macrocarpon Ait.) and a Wild Relative.
Luis Diaz-Garcia, Lorraine Rodriguez-Bonilla, Jessica Rohde, Tyler Smith, Juan Zalapa. Genes (Basel) 2019
5
100

Evolution and Diversification of Kiwifruit Mitogenomes through Extensive Whole-Genome Rearrangement and Mosaic Loss of Intergenic Sequences in a Highly Variable Region.
Shuaibin Wang, Dawei Li, Xiaohong Yao, Qingwei Song, Zupeng Wang, Qiong Zhang, Caihong Zhong, Yifei Liu, Hongwen Huang. Genome Biol Evol 2019
15
100

tRNAscan-SE: Searching for tRNA Genes in Genomic Sequences.
Patricia P Chan, Todd M Lowe. Methods Mol Biol 2019
509
100

Sex chromosomes in land plants.
Ray Ming, Abdelhafid Bendahmane, Susanne S Renner. Annu Rev Plant Biol 2011
234
100

Pilon: an integrated tool for comprehensive microbial variant detection and genome assembly improvement.
Bruce J Walker, Thomas Abeel, Terrance Shea, Margaret Priest, Amr Abouelliel, Sharadha Sakthikumar, Christina A Cuomo, Qiandong Zeng, Jennifer Wortman, Sarah K Young,[...]. PLoS One 2014
100


Towards a plant model for enigmatic U-to-C RNA editing: the organelle genomes, transcriptomes, editomes and candidate RNA editing factors in the hornwort Anthoceros agrestis.
Philipp Gerke, Péter Szövényi, Anna Neubauer, Henning Lenz, Bernard Gutmann, Rose McDowell, Ian Small, Mareike Schallenberg-Rüdinger, Volker Knoop. New Phytol 2020
19
100

The carnivorous bladderwort (Utricularia, Lentibulariaceae): a system inflates.
Victor A Albert, Richard W Jobson, Todd P Michael, Derek J Taylor. J Exp Bot 2010
37
100

The plastid and mitochondrial genomes of Eucalyptus grandis.
Desre Pinard, Alexander A Myburg, Eshchar Mizrachi. BMC Genomics 2019
22
100


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.