A citation-based method for searching scientific literature

David Moi, Shunsuke Nishio, Xiaohui Li, Clari Valansi, Mauricio Langleib, Nicolas G Brukman, Kateryna Flyak, Christophe Dessimoz, Daniele de Sanctis, Kathryn Tunyasuvunakool, John Jumper, Martin Graña, Héctor Romero, Pablo S Aguilar, Luca Jovine, Benjamin Podbilewicz. Nat Commun 2022
Times Cited: 4







List of co-cited articles
20 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


The Ancient Gamete Fusogen HAP2 Is a Eukaryotic Class II Fusion Protein.
Juliette Fédry, Yanjie Liu, Gérard Péhau-Arnaudet, Jimin Pei, Wenhao Li, M Alejandra Tortorici, François Traincard, Annalisa Meola, Gérard Bricogne, Nick V Grishin,[...]. Cell 2017
109
75

Evolutionary diversification of the HAP2 membrane insertion motifs to drive gamete fusion across eukaryotes.
Juliette Fedry, Jennifer Forcina, Pierre Legrand, Gérard Péhau-Arnaudet, Ahmed Haouz, Mark Johnson, Felix A Rey, Thomas Krey. PLoS Biol 2018
32
50

Structural basis of malaria transmission blockade by a monoclonal antibody to gamete fusogen HAP2.
Juan Feng, Xianchi Dong, Adam DeCosta, Yang Su, Fiona Angrisano, Katarzyna A Sala, Andrew M Blagborough, Chafen Lu, Timothy A Springer. Elife 2021
5
50

Highly accurate protein structure prediction with AlphaFold.
John Jumper, Richard Evans, Alexander Pritzel, Tim Green, Michael Figurnov, Olaf Ronneberger, Kathryn Tunyasuvunakool, Russ Bates, Augustin Žídek, Anna Potapenko,[...]. Nature 2021
50

AFF-1, a FOS-1-regulated fusogen, mediates fusion of the anchor cell in C. elegans.
Amir Sapir, Jaebok Choi, Evgenia Leikina, Ori Avinoam, Clari Valansi, Leonid V Chernomordik, Anna P Newman, Benjamin Podbilewicz. Dev Cell 2007
100
50

GENERATIVE CELL SPECIFIC 1 is essential for angiosperm fertilization.
Toshiyuki Mori, Haruko Kuroiwa, Tetsuya Higashiyama, Tsuneyoshi Kuroiwa. Nat Cell Biol 2006
293
50

Find and fuse: Unsolved mysteries in sperm-egg recognition.
Enrica Bianchi, Gavin J Wright. PLoS Biol 2020
24
50

Two HAP2-GCS1 homologs responsible for gamete interactions in the cellular slime mold with multiple mating types: Implication for common mechanisms of sexual reproduction shared by plants and protozoa and for male-female differentiation.
Marina Okamoto, Lixy Yamada, Yukie Fujisaki, Gareth Bloomfield, Kentaro Yoshida, Hidekazu Kuwayama, Hitoshi Sawada, Toshiyuki Mori, Hideko Urushihara. Dev Biol 2016
18
50

The type I membrane protein EFF-1 is essential for developmental cell fusion.
William A Mohler, Gidi Shemer, Jacob J del Campo, Clari Valansi, Eugene Opoku-Serebuoh, Victoria Scranton, Nirit Assaf, John G White, Benjamin Podbilewicz. Dev Cell 2002
181
50

How cells fuse.
Nicolas G Brukman, Berna Uygur, Benjamin Podbilewicz, Leonid V Chernomordik. J Cell Biol 2019
79
50

Structure-Function Studies Link Class II Viral Fusogens with the Ancestral Gamete Fusion Protein HAP2.
Jennifer Fricke Pinello, Alex L Lai, Jean K Millet, Donna Cassidy-Hanley, Jack H Freed, Theodore G Clark. Curr Biol 2017
54
50

The conserved plant sterility gene HAP2 functions after attachment of fusogenic membranes in Chlamydomonas and Plasmodium gametes.
Yanjie Liu, Rita Tewari, Jue Ning, Andrew M Blagborough, Sara Garbom, Jimin Pei, Nick V Grishin, Robert E Steele, Robert E Sinden, William J Snell,[...]. Genes Dev 2008
209
50

Arabidopsis hapless mutations define essential gametophytic functions.
Mark A Johnson, Kiera von Besser, Qing Zhou, Evadne Smith, George Aux, David Patton, Joshua Z Levin, Daphne Preuss. Genetics 2004
180
50

Arabidopsis HAP2 (GCS1) is a sperm-specific gene required for pollen tube guidance and fertilization.
Kiera von Besser, Aubrey C Frank, Mark A Johnson, Daphne Preuss. Development 2006
202
50

Conserved eukaryotic fusogens can fuse viral envelopes to cells.
Ori Avinoam, Karen Fridman, Clari Valansi, Inbal Abutbul, Tzviya Zeev-Ben-Mordehai, Ulrike E Maurer, Amir Sapir, Dganit Danino, Kay Grünewald, Judith M White,[...]. Science 2011
51
50

The C. elegans developmental fusogen EFF-1 mediates homotypic fusion in heterologous cells and in vivo.
Benjamin Podbilewicz, Evgenia Leikina, Amir Sapir, Clari Valansi, Meital Suissa, Gidi Shemer, Leonid V Chernomordik. Dev Cell 2006
104
50

Gamete fusion is facilitated by two sperm cell-expressed DUF679 membrane proteins.
Philipp Cyprys, Maria Lindemeier, Stefanie Sprunck. Nat Plants 2019
37
50

Optimal fluorescent protein tags for quantifying protein oligomerization in living cells.
Valentin Dunsing, Madlen Luckner, Boris Zühlke, Roberto A Petazzi, Andreas Herrmann, Salvatore Chiantia. Sci Rep 2018
42
50

Arabidopsis HAP2/GCS1 is a gamete fusion protein homologous to somatic and viral fusogens.
Clari Valansi, David Moi, Evgenia Leikina, Elena Matveev, Martín Graña, Leonid V Chernomordik, Héctor Romero, Pablo S Aguilar, Benjamin Podbilewicz. J Cell Biol 2017
59
50

Male fertility of malaria parasites is determined by GCS1, a plant-type reproduction factor.
Makoto Hirai, Meiji Arai, Toshiyuki Mori, Shin-Ya Miyagishima, Satoru Kawai, Kiyoshi Kita, Tsuneyoshi Kuroiwa, Olle Terenius, Hiroyuki Matsuoka. Curr Biol 2008
86
50


In vitro reconstitution reveals key intermediate states of trimer formation by the dengue virus membrane fusion protein.
Maofu Liao, Claudia Sánchez-San Martín, Aihua Zheng, Margaret Kielian. J Virol 2010
39
25

Class II virus membrane fusion proteins.
Margaret Kielian. Virology 2006
145
25

A ligand-binding pocket in the dengue virus envelope glycoprotein.
Yorgo Modis, Steven Ogata, David Clements, Stephen C Harrison. Proc Natl Acad Sci U S A 2003
751
25

Fusion surface structure, function, and dynamics of gamete fusogen HAP2.
Juan Feng, Xianchi Dong, Jennifer Pinello, Jun Zhang, Chafen Lu, Roxana E Iacob, John R Engen, William J Snell, Timothy A Springer. Elife 2018
21
25

PHENIX: a comprehensive Python-based system for macromolecular structure solution.
Paul D Adams, Pavel V Afonine, Gábor Bunkóczi, Vincent B Chen, Ian W Davis, Nathaniel Echols, Jeffrey J Headd, Li-Wei Hung, Gary J Kapral, Ralf W Grosse-Kunstleve,[...]. Acta Crystallogr D Biol Crystallogr 2010
25

Protein structure alignment beyond spatial proximity.
Sheng Wang, Jianzhu Ma, Jian Peng, Jinbo Xu. Sci Rep 2013
86
25


New tools for automated high-resolution cryo-EM structure determination in RELION-3.
Jasenko Zivanov, Takanori Nakane, Björn O Forsberg, Dari Kimanius, Wim Jh Hagen, Erik Lindahl, Sjors Hw Scheres. Elife 2018
25

Species-specific gamete recognition initiates fusion-driving trimer formation by conserved fusogen HAP2.
Jun Zhang, Jennifer F Pinello, Ignacio Fernández, Eduard Baquero, Juliette Fedry, Félix A Rey, William J Snell. Nat Commun 2021
9
25

Cryo-EM structure of the mature dengue virus at 3.5-Å resolution.
Xiaokang Zhang, Peng Ge, Xuekui Yu, Jennifer M Brannan, Guoqiang Bi, Qinfen Zhang, Stan Schein, Z Hong Zhou. Nat Struct Mol Biol 2013
275
25

Species-Specific Functional Regions of the Green Alga Gamete Fusion Protein HAP2 Revealed by Structural Studies.
Eduard Baquero, Juliette Fedry, Pierre Legrand, Thomas Krey, Felix A Rey. Structure 2019
16
25

Viral membrane fusion.
Stephen C Harrison. Virology 2015
418
25


Coot: model-building tools for molecular graphics.
Paul Emsley, Kevin Cowtan. Acta Crystallogr D Biol Crystallogr 2004
25

Mechanistic Insight into Bunyavirus-Induced Membrane Fusion from Structure-Function Analyses of the Hantavirus Envelope Glycoprotein Gc.
Pablo Guardado-Calvo, Eduardo A Bignon, Eva Stettner, Scott Allen Jeffers, Jimena Pérez-Vargas, Gerard Pehau-Arnaudet, M Alejandra Tortorici, Jean-Luc Jestin, Patrick England, Nicole D Tischler,[...]. PLoS Pathog 2016
46
25

Structure and interactions at the viral surface of the envelope protein E1 of Semliki Forest virus.
Alain Roussel, Julien Lescar, Marie-Christine Vaney, Gisela Wengler, Gerd Wengler, Félix A Rey. Structure 2006
102
25

MolProbity: all-atom contacts and structure validation for proteins and nucleic acids.
Ian W Davis, Andrew Leaver-Fay, Vincent B Chen, Jeremy N Block, Gary J Kapral, Xueyi Wang, Laura W Murray, W Bryan Arendall, Jack Snoeyink, Jane S Richardson,[...]. Nucleic Acids Res 2007
25

Genome sequence of the ultrasmall unicellular red alga Cyanidioschyzon merolae 10D.
Motomichi Matsuzaki, Osami Misumi, Tadasu Shin-I, Shinichiro Maruyama, Manabu Takahara, Shin-Ya Miyagishima, Toshiyuki Mori, Keiji Nishida, Fumi Yagisawa, Keishin Nishida,[...]. Nature 2004
672
25


Why prokaryotes have pangenomes.
James O McInerney, Alan McNally, Mary J O'Connell. Nat Microbiol 2017
165
25

Transposable elements promote the evolution of genome streamlining.
Bram van Dijk, Frederic Bertels, Lianne Stolk, Nobuto Takeuchi, Paul B Rainey. Philos Trans R Soc Lond B Biol Sci 2022
3
33

Natural transformation increases the rate of adaptation in the human pathogen Helicobacter pylori.
David A Baltrus, Karen Guillemin, Patrick C Phillips. Evolution 2008
75
25


The evolution of meiosis from mitosis.
Adam S Wilkins, Robin Holliday. Genetics 2009
86
25

How energy flow shapes cell evolution.
Nick Lane. Curr Biol 2020
13
25

Rates of Lateral Gene Transfer in Prokaryotes: High but Why?
Michiel Vos, Matthijn C Hesselman, Tim A Te Beek, Mark W J van Passel, Adam Eyre-Walker. Trends Microbiol 2015
86
25

Resolving the paradox of sex and recombination.
Sarah P Otto, Thomas Lenormand. Nat Rev Genet 2002
456
25

Bacterial transformation: distribution, shared mechanisms and divergent control.
Calum Johnston, Bernard Martin, Gwennaele Fichant, Patrice Polard, Jean-Pierre Claverys. Nat Rev Microbiol 2014
318
25



Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.