A citation-based method for searching scientific literature

Aditya Raguram, Samagya Banskota, David R Liu. Cell 2022
Times Cited: 10







List of co-cited articles
33 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


In vivo base editing rescues Hutchinson-Gilford progeria syndrome in mice.
Luke W Koblan, Michael R Erdos, Christopher Wilson, Wayne A Cabral, Jonathan M Levy, Zheng-Mei Xiong, Urraca L Tavarez, Lindsay M Davison, Yantenew G Gete, Xiaojing Mao,[...]. Nature 2021
119
30

Search-and-replace genome editing without double-strand breaks or donor DNA.
Andrew V Anzalone, Peyton B Randolph, Jessie R Davis, Alexander A Sousa, Luke W Koblan, Jonathan M Levy, Peter J Chen, Christopher Wilson, Gregory A Newby, Aditya Raguram,[...]. Nature 2019
30

Improved prime editors enable pathogenic allele correction and cancer modelling in adult mice.
Pengpeng Liu, Shun-Qing Liang, Chunwei Zheng, Esther Mintzer, Yan G Zhao, Karthikeyan Ponnienselvan, Aamir Mir, Erik J Sontheimer, Guangping Gao, Terence R Flotte,[...]. Nat Commun 2021
62
30

Programmable base editing of A•T to G•C in genomic DNA without DNA cleavage.
Nicole M Gaudelli, Alexis C Komor, Holly A Rees, Michael S Packer, Ahmed H Badran, David I Bryson, David R Liu. Nature 2017
30

Programmable editing of a target base in genomic DNA without double-stranded DNA cleavage.
Alexis C Komor, Yongjoo B Kim, Michael S Packer, John A Zuris, David R Liu. Nature 2016
30

In vivo somatic cell base editing and prime editing.
Gregory A Newby, David R Liu. Mol Ther 2021
29
30

Development of a gene-editing approach to restore vision loss in Leber congenital amaurosis type 10.
Morgan L Maeder, Michael Stefanidakis, Christopher J Wilson, Reshica Baral, Luis Alberto Barrera, George S Bounoutas, David Bumcrot, Hoson Chao, Dawn M Ciulla, Jennifer A DaSilva,[...]. Nat Med 2019
287
30

CRISPR-Cas9 In Vivo Gene Editing for Transthyretin Amyloidosis.
Julian D Gillmore, Ed Gane, Jorg Taubel, Justin Kao, Marianna Fontana, Michael L Maitland, Jessica Seitzer, Daniel O'Connell, Kathryn R Walsh, Kristy Wood,[...]. N Engl J Med 2021
293
30

Improving cytidine and adenine base editors by expression optimization and ancestral reconstruction.
Luke W Koblan, Jordan L Doman, Christopher Wilson, Jonathan M Levy, Tristan Tay, Gregory A Newby, Juan Pablo Maianti, Aditya Raguram, David R Liu. Nat Biotechnol 2018
349
20

Genome editing with CRISPR-Cas nucleases, base editors, transposases and prime editors.
Andrew V Anzalone, Luke W Koblan, David R Liu. Nat Biotechnol 2020
576
20

Engineering adeno-associated virus vectors for gene therapy.
Chengwen Li, R Jude Samulski. Nat Rev Genet 2020
302
20

Deletion and replacement of long genomic sequences using prime editing.
Tingting Jiang, Xiao-Ou Zhang, Zhiping Weng, Wen Xue. Nat Biotechnol 2022
24
20

In vivo CRISPR base editing of PCSK9 durably lowers cholesterol in primates.
Kiran Musunuru, Alexandra C Chadwick, Taiji Mizoguchi, Sara P Garcia, Jamie E DeNizio, Caroline W Reiss, Kui Wang, Sowmya Iyer, Chaitali Dutta, Victoria Clendaniel,[...]. Nature 2021
160
20


The widespread IS200/IS605 transposon family encodes diverse programmable RNA-guided endonucleases.
Han Altae-Tran, Soumya Kannan, F Esra Demircioglu, Rachel Oshiro, Suchita P Nety, Luke J McKay, Mensur Dlakić, William P Inskeep, Kira S Makarova, Rhiannon K Macrae,[...]. Science 2021
42
20

CRISPR-CasΦ from huge phages is a hypercompact genome editor.
Patrick Pausch, Basem Al-Shayeb, Ezra Bisom-Rapp, Connor A Tsuchida, Zheng Li, Brady F Cress, Gavin J Knott, Steven E Jacobsen, Jillian F Banfield, Jennifer A Doudna. Science 2020
173
20

Transposon-associated TnpB is a programmable RNA-guided DNA endonuclease.
Tautvydas Karvelis, Gytis Druteika, Greta Bigelyte, Karolina Budre, Rimante Zedaveinyte, Arunas Silanskas, Darius Kazlauskas, Česlovas Venclovas, Virginijus Siksnys. Nature 2021
25
20

Transposon-encoded CRISPR-Cas systems direct RNA-guided DNA integration.
Sanne E Klompe, Phuc L H Vo, Tyler S Halpin-Healy, Samuel H Sternberg. Nature 2019
200
20

In vivo adenine base editing of PCSK9 in macaques reduces LDL cholesterol levels.
Tanja Rothgangl, Melissa K Dennis, Paulo J C Lin, Rurika Oka, Dominik Witzigmann, Lukas Villiger, Weihong Qi, Martina Hruzova, Lucas Kissling, Daniela Lenggenhager,[...]. Nat Biotechnol 2021
84
20

Phage-assisted evolution of an adenine base editor with improved Cas domain compatibility and activity.
Michelle F Richter, Kevin T Zhao, Elliot Eton, Audrone Lapinaite, Gregory A Newby, Benjamin W Thuronyi, Christopher Wilson, Luke W Koblan, Jing Zeng, Daniel E Bauer,[...]. Nat Biotechnol 2020
207
20

Application of prime editing to the correction of mutations and phenotypes in adult mice with liver and eye diseases.
Hyewon Jang, Dong Hyun Jo, Chang Sik Cho, Jeong Hong Shin, Jung Hwa Seo, Goosang Yu, Ramu Gopalappa, Daesik Kim, Sung-Rae Cho, Jeong Hun Kim,[...]. Nat Biomed Eng 2022
29
20

Programmable deletion, replacement, integration and inversion of large DNA sequences with twin prime editing.
Andrew V Anzalone, Xin D Gao, Christopher J Podracky, Andrew T Nelson, Luke W Koblan, Aditya Raguram, Jonathan M Levy, Jaron A M Mercer, David R Liu. Nat Biotechnol 2022
42
20

RNA-guided DNA insertion with CRISPR-associated transposases.
Jonathan Strecker, Alim Ladha, Zachary Gardner, Jonathan L Schmid-Burgk, Kira S Makarova, Eugene V Koonin, Feng Zhang. Science 2019
213
20

A programmable dual-RNA-guided DNA endonuclease in adaptive bacterial immunity.
Martin Jinek, Krzysztof Chylinski, Ines Fonfara, Michael Hauer, Jennifer A Doudna, Emmanuelle Charpentier. Science 2012
20

CRISPR provides acquired resistance against viruses in prokaryotes.
Rodolphe Barrangou, Christophe Fremaux, Hélène Deveau, Melissa Richards, Patrick Boyaval, Sylvain Moineau, Dennis A Romero, Philippe Horvath. Science 2007
20

CRISPR-Cas9 Structures and Mechanisms.
Fuguo Jiang, Jennifer A Doudna. Annu Rev Biophys 2017
698
20

ZFN, TALEN, and CRISPR/Cas-based methods for genome engineering.
Thomas Gaj, Charles A Gersbach, Carlos F Barbas. Trends Biotechnol 2013
20

Determinants of Base Editing Outcomes from Target Library Analysis and Machine Learning.
Mandana Arbab, Max W Shen, Beverly Mok, Christopher Wilson, Żaneta Matuszek, Christopher A Cassa, David R Liu. Cell 2020
85
20

CRISPR-Cas9 Gene Editing for Sickle Cell Disease and β-Thalassemia.
Haydar Frangoul, David Altshuler, M Domenica Cappellini, Yi-Shan Chen, Jennifer Domm, Brenda K Eustace, Juergen Foell, Josu de la Fuente, Stephan Grupp, Rupert Handgretinger,[...]. N Engl J Med 2021
397
20

Engineered virus-like particles for efficient in vivo delivery of therapeutic proteins.
Samagya Banskota, Aditya Raguram, Susie Suh, Samuel W Du, Jessie R Davis, Elliot H Choi, Xiao Wang, Sarah C Nielsen, Gregory A Newby, Peyton B Randolph,[...]. Cell 2022
55
20

Cas9/gRNA targeted excision of cystic fibrosis-causing deep-intronic splicing mutations restores normal splicing of CFTR mRNA.
David J Sanz, Jennifer A Hollywood, Martina F Scallan, Patrick T Harrison. PLoS One 2017
48
20

Chemical modifications of adenine base editor mRNA and guide RNA expand its application scope.
Tingting Jiang, Jordana M Henderson, Kevin Coote, Yi Cheng, Hillary C Valley, Xiao-Ou Zhang, Qin Wang, Luke H Rhym, Yueying Cao, Gregory A Newby,[...]. Nat Commun 2020
39
20

The evolution of commercial drug delivery technologies.
Ava M Vargason, Aaron C Anselmo, Samir Mitragotri. Nat Biomed Eng 2021
108
20

Dual modes of CRISPR-associated transposon homing.
Makoto Saito, Alim Ladha, Jonathan Strecker, Guilhem Faure, Edwin Neumann, Han Altae-Tran, Rhiannon K Macrae, Feng Zhang. Cell 2021
28
10

Engineered pegRNAs improve prime editing efficiency.
James W Nelson, Peyton B Randolph, Simon P Shen, Kelcee A Everette, Peter J Chen, Andrew V Anzalone, Meirui An, Gregory A Newby, Jonathan C Chen, Alvin Hsu,[...]. Nat Biotechnol 2022
67
10

A split prime editor with untethered reverse transcriptase and circular RNA template.
Bin Liu, Xiaolong Dong, Haoyang Cheng, Chunwei Zheng, Zexiang Chen, Tomás C Rodríguez, Shun-Qing Liang, Wen Xue, Erik J Sontheimer. Nat Biotechnol 2022
7
14

Molecular archeology of L1 insertions in the human genome.
Suzanne T Szak, Oxana K Pickeral, Wojciech Makalowski, Mark S Boguski, David Landsman, Jef D Boeke. Genome Biol 2002
141
10

Site-specific non-LTR retrotransposons.
Haruhiko Fujiwara. Microbiol Spectr 2015
19
10

RNA-guided piggyBac transposition in human cells.
Brian E Hew, Ryuei Sato, Damiano Mauro, Ilko Stoytchev, Jesse B Owens. Synth Biol (Oxf) 2019
18
10

Structural basis of DNA targeting by a transposon-encoded CRISPR-Cas system.
Tyler S Halpin-Healy, Sanne E Klompe, Samuel H Sternberg, Israel S Fernández. Nature 2020
37
10

Structural basis for DNA targeting by the Tn7 transposon.
Yao Shen, Josue Gomez-Blanco, Michael T Petassi, Joseph E Peters, Joaquin Ortega, Alba Guarné. Nat Struct Mol Biol 2022
7
14

Precise genomic deletions using paired prime editing.
Junhong Choi, Wei Chen, Chase C Suiter, Choli Lee, Florence M Chardon, Wei Yang, Anh Leith, Riza M Daza, Beth Martin, Jay Shendure. Nat Biotechnol 2022
30
10

HIV-1 proviral DNA excision using an evolved recombinase.
Indrani Sarkar, Ilona Hauber, Joachim Hauber, Frank Buchholz. Science 2007
144
10


Chromothripsis as an on-target consequence of CRISPR-Cas9 genome editing.
Mitchell L Leibowitz, Stamatis Papathanasiou, Phillip A Doerfler, Logan J Blaine, Lili Sun, Yu Yao, Cheng-Zhong Zhang, Mitchell J Weiss, David Pellman. Nat Genet 2021
108
10

Non-LTR retrotransposons and microsatellites: Partners in genomic variation.
Fiorella C Grandi, Wenfeng An. Mob Genet Elements 2013
23
10

Recruitment of CRISPR-Cas systems by Tn7-like transposons.
Joseph E Peters, Kira S Makarova, Sergey Shmakov, Eugene V Koonin. Proc Natl Acad Sci U S A 2017
110
10

Genome-scale measurement of off-target activity using Cas9 toxicity in high-throughput screens.
David W Morgens, Michael Wainberg, Evan A Boyle, Oana Ursu, Carlos L Araya, C Kimberly Tsui, Michael S Haney, Gaelen T Hess, Kyuho Han, Edwin E Jeng,[...]. Nat Commun 2017
134
10

RNA-guided retargeting of Sleeping Beauty transposition in human cells.
Adrian Kovač, Csaba Miskey, Michael Menzel, Esther Grueso, Andreas Gogol-Döring, Zoltán Ivics. Elife 2020
18
10

CRISPR RNA-guided integrases for high-efficiency, multiplexed bacterial genome engineering.
Phuc Leo H Vo, Carlotta Ronda, Sanne E Klompe, Ethan E Chen, Christopher Acree, Harris H Wang, Samuel H Sternberg. Nat Biotechnol 2021
66
10


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.