A citation-based method for searching scientific literature

D Oesterhelt, W Stoeckenius. Nat New Biol 1971
Times Cited: 1149







List of co-cited articles
821 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Microbial and animal rhodopsins: structures, functions, and molecular mechanisms.
Oliver P Ernst, David T Lodowski, Marcus Elstner, Peter Hegemann, Leonid S Brown, Hideki Kandori. Chem Rev 2014
500
43

Channelrhodopsin-1: a light-gated proton channel in green algae.
Georg Nagel, Doris Ollig, Markus Fuhrmann, Suneel Kateriya, Anna Maria Musti, Ernst Bamberg, Peter Hegemann. Science 2002
592
29

A light-driven sodium ion pump in marine bacteria.
Keiichi Inoue, Hikaru Ono, Rei Abe-Yoshizumi, Susumu Yoshizawa, Hiroyasu Ito, Kazuhiro Kogure, Hideki Kandori. Nat Commun 2013
204
29

Channelrhodopsin-2, a directly light-gated cation-selective membrane channel.
Georg Nagel, Tanjef Szellas, Wolfram Huhn, Suneel Kateriya, Nona Adeishvili, Peter Berthold, Doris Ollig, Peter Hegemann, Ernst Bamberg. Proc Natl Acad Sci U S A 2003
27

Millisecond-timescale, genetically targeted optical control of neural activity.
Edward S Boyden, Feng Zhang, Ernst Bamberg, Georg Nagel, Karl Deisseroth. Nat Neurosci 2005
23

Functions of a new photoreceptor membrane.
D Oesterhelt, W Stoeckenius. Proc Natl Acad Sci U S A 1973
742
22

Bacterial rhodopsin: evidence for a new type of phototrophy in the sea.
O Béjà, L Aravind, E V Koonin, M T Suzuki, A Hadd, L P Nguyen, S B Jovanovich, C M Gates, R A Feldman, J L Spudich,[...]. Science 2000
834
21

Structural basis for Na(+) transport mechanism by a light-driven Na(+) pump.
Hideaki E Kato, Keiichi Inoue, Rei Abe-Yoshizumi, Yoshitaka Kato, Hikaru Ono, Masae Konno, Shoko Hososhima, Toru Ishizuka, Mohammad Razuanul Hoque, Hirofumi Kunitomo,[...]. Nature 2015
112
20

Bacteriorhodopsin.
Janos K Lanyi. Annu Rev Physiol 2004
351
18

Structure of bacteriorhodopsin at 1.55 A resolution.
H Luecke, B Schobert, H T Richter, J P Cartailler, J K Lanyi. J Mol Biol 1999
18

Microbial Rhodopsins: Diversity, Mechanisms, and Optogenetic Applications.
Elena G Govorunova, Oleg A Sineshchekov, Hai Li, John L Spudich. Annu Rev Biochem 2017
117
17

A natural light-driven inward proton pump.
Keiichi Inoue, Shota Ito, Yoshitaka Kato, Yurika Nomura, Mikihiro Shibata, Takayuki Uchihashi, Satoshi P Tsunoda, Hideki Kandori. Nat Commun 2016
55
29


NEUROSCIENCE. Natural light-gated anion channels: A family of microbial rhodopsins for advanced optogenetics.
Elena G Govorunova, Oleg A Sineshchekov, Roger Janz, Xiaoqin Liu, John L Spudich. Science 2015
267
15


Inward H+ pump xenorhodopsin: Mechanism and alternative optogenetic approach.
Vitaly Shevchenko, Thomas Mager, Kirill Kovalev, Vitaly Polovinkin, Alexey Alekseev, Josephine Juettner, Igor Chizhov, Christian Bamann, Charlotte Vavourakis, Rohit Ghai,[...]. Sci Adv 2017
32
46

Crystal structure of the channelrhodopsin light-gated cation channel.
Hideaki E Kato, Feng Zhang, Ofer Yizhar, Charu Ramakrishnan, Tomohiro Nishizawa, Kunio Hirata, Jumpei Ito, Yusuke Aita, Tomoya Tsukazaki, Shigehiko Hayashi,[...]. Nature 2012
301
14

Structural insights into ion conduction by channelrhodopsin 2.
Oleksandr Volkov, Kirill Kovalev, Vitaly Polovinkin, Valentin Borshchevskiy, Christian Bamann, Roman Astashkin, Egor Marin, Alexander Popov, Taras Balandin, Dieter Willbold,[...]. Science 2017
68
19

High-performance genetically targetable optical neural silencing by light-driven proton pumps.
Brian Y Chow, Xue Han, Allison S Dobry, Xiaofeng Qian, Amy S Chuong, Mingjie Li, Michael A Henninger, Gabriel M Belfort, Yingxi Lin, Patrick E Monahan,[...]. Nature 2010
704
12

Marine Bacterial and Archaeal Ion-Pumping Rhodopsins: Genetic Diversity, Physiology, and Ecology.
Jarone Pinhassi, Edward F DeLong, Oded Béjà, José M González, Carlos Pedrós-Alió. Microbiol Mol Biol Rev 2016
72
16

Crystal structure of a light-driven sodium pump.
Ivan Gushchin, Vitaly Shevchenko, Vitaly Polovinkin, Kirill Kovalev, Alexey Alekseev, Ekaterina Round, Valentin Borshchevskiy, Taras Balandin, Alexander Popov, Thomas Gensch,[...]. Nat Struct Mol Biol 2015
93
12

A three-dimensional movie of structural changes in bacteriorhodopsin.
Eriko Nango, Antoine Royant, Minoru Kubo, Takanori Nakane, Cecilia Wickstrand, Tetsunari Kimura, Tomoyuki Tanaka, Kensuke Tono, Changyong Song, Rie Tanaka,[...]. Science 2016
172
12

Structure and mechanisms of sodium-pumping KR2 rhodopsin.
Kirill Kovalev, Vitaly Polovinkin, Ivan Gushchin, Alexey Alekseev, Vitaly Shevchenko, Valentin Borshchevskiy, Roman Astashkin, Taras Balandin, Dmitry Bratanov, Svetlana Vaganova,[...]. Sci Adv 2019
31
38


Halorhodopsin is a light-driven chloride pump.
B Schobert, J K Lanyi. J Biol Chem 1982
319
11

Two rhodopsins mediate phototaxis to low- and high-intensity light in Chlamydomonas reinhardtii.
Oleg A Sineshchekov, Kwang-Hwan Jung, John L Spudich. Proc Natl Acad Sci U S A 2002
331
11

Ion-pumping microbial rhodopsins.
Hideki Kandori. Front Mol Biosci 2015
61
18

The role of protein-bound water molecules in microbial rhodopsins.
Klaus Gerwert, Erik Freier, Steffen Wolf. Biochim Biophys Acta 2014
78
14

A distinct abundant group of microbial rhodopsins discovered using functional metagenomics.
Alina Pushkarev, Keiichi Inoue, Shirley Larom, José Flores-Uribe, Manish Singh, Masae Konno, Sahoko Tomida, Shota Ito, Ryoko Nakamura, Satoshi P Tsunoda,[...]. Nature 2018
69
15

Optogenetics.
Karl Deisseroth. Nat Methods 2011
858
11

Conversion of channelrhodopsin into a light-gated chloride channel.
Jonas Wietek, J Simon Wiegert, Nona Adeishvili, Franziska Schneider, Hiroshi Watanabe, Satoshi P Tsunoda, Arend Vogt, Marcus Elstner, Thomas G Oertner, Peter Hegemann. Science 2014
199
10

Independent optical excitation of distinct neural populations.
Nathan C Klapoetke, Yasunobu Murata, Sung Soo Kim, Stefan R Pulver, Amanda Birdsey-Benson, Yong Ku Cho, Tania K Morimoto, Amy S Chuong, Eric J Carpenter, Zhijian Tian,[...]. Nat Methods 2014
862
10

Structure-guided transformation of channelrhodopsin into a light-activated chloride channel.
Andre Berndt, Soo Yeun Lee, Charu Ramakrishnan, Karl Deisseroth. Science 2014
215
9

Proteorhodopsin phototrophy in the ocean.
O Béjà, E N Spudich, J L Spudich, M Leclerc, E F DeLong. Nature 2001
466
9

Bacteriorhodopsin: a light-driven proton pump in Halobacterium Halobium.
R H Lozier, R A Bogomolni, W Stoeckenius. Biophys J 1975
606
9

Closing in on bacteriorhodopsin: progress in understanding the molecule.
U Haupts, J Tittor, D Oesterhelt. Annu Rev Biophys Biomol Struct 1999
383
9

Energetics and dynamics of a light-driven sodium-pumping rhodopsin.
Carl-Mikael Suomivuori, Ana P Gamiz-Hernandez, Dage Sundholm, Ville R I Kaila. Proc Natl Acad Sci U S A 2017
42
21

Retinal isomerization in bacteriorhodopsin captured by a femtosecond x-ray laser.
Przemyslaw Nogly, Tobias Weinert, Daniel James, Sergio Carbajo, Dmitry Ozerov, Antonia Furrer, Dardan Gashi, Veniamin Borin, Petr Skopintsev, Kathrin Jaeger,[...]. Science 2018
119
9

Biophysics of Channelrhodopsin.
Franziska Schneider, Christiane Grimm, Peter Hegemann. Annu Rev Biophys 2015
94
8

Diversification and spectral tuning in marine proteorhodopsins.
Dikla Man, Weiwu Wang, Gazalah Sabehi, L Aravind, Anton F Post, Ramon Massana, Elena N Spudich, John L Spudich, Oded Béjà. EMBO J 2003
196
8

Ultrafast photoreaction dynamics of a light-driven sodium-ion-pumping retinal protein from Krokinobacter eikastus revealed by femtosecond time-resolved absorption spectroscopy.
Shinya Tahara, Satoshi Takeuchi, Rei Abe-Yoshizumi, Keiichi Inoue, Hiroyuki Ohtani, Hideki Kandori, Tahei Tahara. J Phys Chem Lett 2015
31
25

Role of Asn112 in a Light-Driven Sodium Ion-Pumping Rhodopsin.
Rei Abe-Yoshizumi, Keiichi Inoue, Hideaki E Kato, Osamu Nureki, Hideki Kandori. Biochemistry 2016
15
53

The photochemistry of sodium ion pump rhodopsin observed by watermarked femto- to submillisecond stimulated Raman spectroscopy.
Yusaku Hontani, Keiichi Inoue, Miroslav Kloz, Yoshitaka Kato, Hideki Kandori, John T M Kennis. Phys Chem Chem Phys 2016
33
24

Structural insights into the proton pumping by unusual proteorhodopsin from nonmarine bacteria.
Ivan Gushchin, Pavel Chervakov, Pavel Kuzmichev, Alexander N Popov, Ekaterina Round, Valentin Borshchevskiy, Andrii Ishchenko, Lada Petrovskaya, Vladimir Chupin, Dmitry A Dolgikh,[...]. Proc Natl Acad Sci U S A 2013
56
14


PHENIX: a comprehensive Python-based system for macromolecular structure solution.
Paul D Adams, Pavel V Afonine, Gábor Bunkóczi, Vincent B Chen, Ian W Davis, Nathaniel Echols, Jeffrey J Headd, Li-Wei Hung, Gary J Kapral, Ralf W Grosse-Kunstleve,[...]. Acta Crystallogr D Biol Crystallogr 2010
8

Coot: model-building tools for molecular graphics.
Paul Emsley, Kevin Cowtan. Acta Crystallogr D Biol Crystallogr 2004
8

Kinetic Analysis of H(+)-Na(+) Selectivity in a Light-Driven Na(+)-Pumping Rhodopsin.
Yoshitaka Kato, Keiichi Inoue, Hideki Kandori. J Phys Chem Lett 2015
26
30

XDS.
Wolfgang Kabsch. Acta Crystallogr D Biol Crystallogr 2010
8

Mutant of a Light-Driven Sodium Ion Pump Can Transport Cesium Ions.
Masae Konno, Yoshitaka Kato, Hideaki E Kato, Keiichi Inoue, Osamu Nureki, Hideki Kandori. J Phys Chem Lett 2016
22
36


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.