A citation-based method for searching scientific literature

K Kruger, P J Grabowski, A J Zaug, J Sands, D E Gottschling, T R Cech. Cell 1982
Times Cited: 1300







List of co-cited articles
998 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


The RNA moiety of ribonuclease P is the catalytic subunit of the enzyme.
C Guerrier-Takada, K Gardiner, T Marsh, N Pace, S Altman. Cell 1983
49



A DNA enzyme that cleaves RNA.
R R Breaker, G F Joyce. Chem Biol 1994
709
15

New classes of self-cleaving ribozymes revealed by comparative genomics analysis.
Zasha Weinberg, Peter B Kim, Tony H Chen, Sanshu Li, Kimberly A Harris, Christina E Lünse, Ronald R Breaker. Nat Chem Biol 2015
112
12

A widespread self-cleaving ribozyme class is revealed by bioinformatics.
Adam Roth, Zasha Weinberg, Andy G Y Chen, Peter B Kim, Tyler D Ames, Ronald R Breaker. Nat Chem Biol 2014
138
10


The origin of the genetic code.
F H Crick. J Mol Biol 1968
9

The structural basis of ribosome activity in peptide bond synthesis.
P Nissen, J Hansen, N Ban, P B Moore, T A Steitz. Science 2000
9

Chemistry and Biology of Self-Cleaving Ribozymes.
Randi M Jimenez, Julio A Polanco, Andrej Lupták. Trends Biochem Sci 2015
95
8

Small, highly active DNAs that hydrolyze DNA.
Hongzhou Gu, Kazuhiro Furukawa, Zasha Weinberg, Daniel F Berenson, Ronald R Breaker. J Am Chem Soc 2013
76
10

Functional nucleic acid sensors.
Juewen Liu, Zehui Cao, Yi Lu. Chem Rev 2009
8

Discovery and Biosensing Applications of Diverse RNA-Cleaving DNAzymes.
Meng Liu, Dingran Chang, Yingfu Li. Acc Chem Res 2017
100
8



Riboswitch diversity and distribution.
Phillip J McCown, Keith A Corbino, Shira Stav, Madeline E Sherlock, Ronald R Breaker. RNA 2017
182
7

Evolution of the genetic apparatus.
L E Orgel. J Mol Biol 1968
536
7

The chemical repertoire of natural ribozymes.
Jennifer A Doudna, Thomas R Cech. Nature 2002
432
7


Genetic control by a metabolite binding mRNA.
Ali Nahvi, Narasimhan Sudarsan, Margaret S Ebert, Xiang Zou, Kenneth L Brown, Ronald R Breaker. Chem Biol 2002
482
7

Control of gene expression by a natural metabolite-responsive ribozyme.
Wade C Winkler, Ali Nahvi, Adam Roth, Jennifer A Collins, Ronald R Breaker. Nature 2004
593
7



Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans.
A Fire, S Xu, M K Montgomery, S A Kostas, S E Driver, C C Mello. Nature 1998
7


Natural RNA circles function as efficient microRNA sponges.
Thomas B Hansen, Trine I Jensen, Bettina H Clausen, Jesper B Bramsen, Bente Finsen, Christian K Damgaard, Jørgen Kjems. Nature 2013
6

Amplification of RNA by an RNA polymerase ribozyme.
David P Horning, Gerald F Joyce. Proc Natl Acad Sci U S A 2016
84
7

Identification of hammerhead ribozymes in all domains of life reveals novel structural variations.
Jonathan Perreault, Zasha Weinberg, Adam Roth, Olivia Popescu, Pascal Chartrand, Gerardo Ferbeyre, Ronald R Breaker. PLoS Comput Biol 2011
92
6

A genomewide search for ribozymes reveals an HDV-like sequence in the human CPEB3 gene.
Kourosh Salehi-Ashtiani, Andrej Lupták, Alexander Litovchick, Jack W Szostak. Science 2006
188
6


A catalytic DNA for porphyrin metallation.
Y Li, D Sen. Nat Struct Biol 1996
210
6

Autolytic processing of dimeric plant virus satellite RNA.
G A Prody, J T Bakos, J M Buzayan, I R Schneider, G Bruening. Science 1986
438
6

In vitro selection of a sodium-specific DNAzyme and its application in intracellular sensing.
Seyed-Fakhreddin Torabi, Peiwen Wu, Claire E McGhee, Lu Chen, Kevin Hwang, Nan Zheng, Jianjun Cheng, Yi Lu. Proc Natl Acad Sci U S A 2015
156
6

Synthesis of activated pyrimidine ribonucleotides in prebiotically plausible conditions.
Matthew W Powner, Béatrice Gerland, John D Sutherland. Nature 2009
521
6

The antiquity of RNA-based evolution.
Gerald F Joyce. Nature 2002
510
6

DNAzyme-based biosensors and nanodevices.
Liang Gong, Zilong Zhao, Yi-Fan Lv, Shuang-Yan Huan, Ting Fu, Xiao-Bing Zhang, Guo-Li Shen, Ru-Qin Yu. Chem Commun (Camb) 2015
136
6

DNAzyme-Mediated Assays for Amplified Detection of Nucleic Acids and Proteins.
Hanyong Peng, Ashley M Newbigging, Zhixin Wang, Jeffrey Tao, Wenchan Deng, X Chris Le, Hongquan Zhang. Anal Chem 2018
78
7

Novel ribozymes: discovery, catalytic mechanisms, and the quest to understand biological function.
Christina E Weinberg, Zasha Weinberg, Christian Hammann. Nucleic Acids Res 2019
22
27

A highly selective lead sensor based on a classic lead DNAzyme.
Tian Lan, Kimberly Furuya, Yi Lu. Chem Commun (Camb) 2010
144
6


Sensing small molecules by nascent RNA: a mechanism to control transcription in bacteria.
Alexander S Mironov, Ivan Gusarov, Ruslan Rafikov, Lubov Errais Lopez, Konstantin Shatalin, Rimma A Kreneva, Daniel A Perumov, Evgeny Nudler. Cell 2002
425
6

Riboswitches and the RNA world.
Ronald R Breaker. Cold Spring Harb Perspect Biol 2012
364
5

Macronuclear genome sequence of the ciliate Tetrahymena thermophila, a model eukaryote.
Jonathan A Eisen, Robert S Coyne, Martin Wu, Dongying Wu, Mathangi Thiagarajan, Jennifer R Wortman, Jonathan H Badger, Qinghu Ren, Paolo Amedeo, Kristie M Jones,[...]. PLoS Biol 2006
497
5

Ribozyme-catalysed RNA synthesis using triplet building blocks.
James Attwater, Aditya Raguram, Alexey S Morgunov, Edoardo Gianni, Philipp Holliger. Elife 2018
39
12

Circular RNAs are a large class of animal RNAs with regulatory potency.
Sebastian Memczak, Marvin Jens, Antigoni Elefsinioti, Francesca Torti, Janna Krueger, Agnieszka Rybak, Luisa Maier, Sebastian D Mackowiak, Lea H Gregersen, Mathias Munschauer,[...]. Nature 2013
5

Twister ribozymes as highly versatile expression platforms for artificial riboswitches.
Michele Felletti, Julia Stifel, Lena A Wurmthaler, Sophie Geiger, Jörg S Hartig. Nat Commun 2016
43
11

RNA mimics of green fluorescent protein.
Jeremy S Paige, Karen Y Wu, Samie R Jaffrey. Science 2011
670
5

Widespread occurrence of self-cleaving ribozymes.
Chiu-Ho T Webb, Nathan J Riccitelli, Dana J Ruminski, Andrej Lupták. Science 2009
131
5

A programmable dual-RNA-guided DNA endonuclease in adaptive bacterial immunity.
Martin Jinek, Krzysztof Chylinski, Ines Fonfara, Michael Hauer, Jennifer A Doudna, Emmanuelle Charpentier. Science 2012
5



Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.