A citation-based method for searching scientific literature

N A Farrow, R Muhandiram, A U Singer, S M Pascal, C M Kay, G Gish, S E Shoelson, T Pawson, J D Forman-Kay, L E Kay. Biochemistry 1994
Times Cited: 1910







List of co-cited articles
432 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


NMRPipe: a multidimensional spectral processing system based on UNIX pipes.
F Delaglio, S Grzesiek, G W Vuister, G Zhu, J Pfeifer, A Bax. J Biomol NMR 1995
60


The CCPN data model for NMR spectroscopy: development of a software pipeline.
Wim F Vranken, Wayne Boucher, Tim J Stevens, Rasmus H Fogh, Anne Pajon, Miguel Llinas, Eldon L Ulrich, John L Markley, John Ionides, Ernest D Laue. Proteins 2005
29

NMRFAM-SPARKY: enhanced software for biomolecular NMR spectroscopy.
Woonghee Lee, Marco Tonelli, John L Markley. Bioinformatics 2015
653
24

TALOS+: a hybrid method for predicting protein backbone torsion angles from NMR chemical shifts.
Yang Shen, Frank Delaglio, Gabriel Cornilescu, Ad Bax. J Biomol NMR 2009
14



AQUA and PROCHECK-NMR: programs for checking the quality of protein structures solved by NMR.
R A Laskowski, J A Rullmannn, M W MacArthur, R Kaptein, J M Thornton. J Biomol NMR 1996
10


Features and development of Coot.
P Emsley, B Lohkamp, W G Scott, K Cowtan. Acta Crystallogr D Biol Crystallogr 2010
9


MOLMOL: a program for display and analysis of macromolecular structures.
R Koradi, M Billeter, K Wüthrich. J Mol Graph 1996
9

1H, 13C and 15N chemical shift referencing in biomolecular NMR.
D S Wishart, C G Bigam, J Yao, F Abildgaard, H J Dyson, E Oldfield, J L Markley, B D Sykes. J Biomol NMR 1995
8

Automated NMR structure calculation with CYANA.
Peter Güntert. Methods Mol Biol 2004
974
8

Evaluating protein structures determined by structural genomics consortia.
Aneerban Bhattacharya, Roberto Tejero, Gaetano T Montelione. Proteins 2007
489
8

ATSAS 2.8: a comprehensive data analysis suite for small-angle scattering from macromolecular solutions.
D Franke, M V Petoukhov, P V Konarev, A Panjkovich, A Tuukkanen, H D T Mertens, A G Kikhney, N R Hajizadeh, J M Franklin, C M Jeffries,[...]. J Appl Crystallogr 2017
592
7

An introduction to NMR-based approaches for measuring protein dynamics.
Ian R Kleckner, Mark P Foster. Biochim Biophys Acta 2011
268
7

XDS.
Wolfgang Kabsch. Acta Crystallogr D Biol Crystallogr 2010
7

PHENIX: a comprehensive Python-based system for macromolecular structure solution.
Paul D Adams, Pavel V Afonine, Gábor Bunkóczi, Vincent B Chen, Ian W Davis, Nathaniel Echols, Jeffrey J Headd, Li-Wei Hung, Gary J Kapral, Ralf W Grosse-Kunstleve,[...]. Acta Crystallogr D Biol Crystallogr 2010
7


Overview of the CCP4 suite and current developments.
Martyn D Winn, Charles C Ballard, Kevin D Cowtan, Eleanor J Dodson, Paul Emsley, Phil R Evans, Ronan M Keegan, Eugene B Krissinel, Andrew G W Leslie, Airlie McCoy,[...]. Acta Crystallogr D Biol Crystallogr 2011
7


Improved side-chain torsion potentials for the Amber ff99SB protein force field.
Kresten Lindorff-Larsen, Stefano Piana, Kim Palmo, Paul Maragakis, John L Klepeis, Ron O Dror, David E Shaw. Proteins 2010
7



UCSF Chimera--a visualization system for exploratory research and analysis.
Eric F Pettersen, Thomas D Goddard, Conrad C Huang, Gregory S Couch, Daniel M Greenblatt, Elaine C Meng, Thomas E Ferrin. J Comput Chem 2004
6

Using chemical shift perturbation to characterise ligand binding.
Mike P Williamson. Prog Nucl Magn Reson Spectrosc 2013
624
6


An NMR experiment for the accurate measurement of heteronuclear spin-lock relaxation rates.
Dmitry M Korzhnev, Nikolai R Skrynnikov, Oscar Millet, Dennis A Torchia, Lewis E Kay. J Am Chem Soc 2002
107
6


Recovering lost magnetization: polarization enhancement in biomolecular NMR.
Adrien Favier, Bernhard Brutscher. J Biomol NMR 2011
131
6


VMD: visual molecular dynamics.
W Humphrey, A Dalke, K Schulten. J Mol Graph 1996
6


Structural characterization of flexible proteins using small-angle X-ray scattering.
Pau Bernadó, Efstratios Mylonas, Maxim V Petoukhov, Martin Blackledge, Dmitri I Svergun. J Am Chem Soc 2007
776
5

Primary structure effects on peptide group hydrogen exchange.
Y Bai, J S Milne, L Mayne, S W Englander. Proteins 1993
5

ARIA2: automated NOE assignment and data integration in NMR structure calculation.
Wolfgang Rieping, Michael Habeck, Benjamin Bardiaux, Aymeric Bernard, Thérèse E Malliavin, Michael Nilges. Bioinformatics 2007
357
5


Sequence-dependent correction of random coil NMR chemical shifts.
S Schwarzinger, G J Kroon, T R Foss, J Chung, P E Wright, H J Dyson. J Am Chem Soc 2001
456
5

Spectral density function mapping using 15N relaxation data exclusively.
N A Farrow, O Zhang, A Szabo, D A Torchia, L E Kay. J Biomol NMR 1995
402
5

A microscale protein NMR sample screening pipeline.
Paolo Rossi, G V T Swapna, Yuanpeng J Huang, James M Aramini, Clemens Anklin, Kenith Conover, Keith Hamilton, Rong Xiao, Thomas B Acton, Asli Ertekin,[...]. J Biomol NMR 2010
77
6

13C NMR chemical shifts can predict disulfide bond formation.
D Sharma, K Rajarathnam. J Biomol NMR 2000
219
5

Phaser crystallographic software.
Airlie J McCoy, Ralf W Grosse-Kunstleve, Paul D Adams, Martyn D Winn, Laurent C Storoni, Randy J Read. J Appl Crystallogr 2007
5






MolProbity: all-atom structure validation for macromolecular crystallography.
Vincent B Chen, W Bryan Arendall, Jeffrey J Headd, Daniel A Keedy, Robert M Immormino, Gary J Kapral, Laura W Murray, Jane S Richardson, David C Richardson. Acta Crystallogr D Biol Crystallogr 2010
4

Data processing and analysis with the autoPROC toolbox.
Clemens Vonrhein, Claus Flensburg, Peter Keller, Andrew Sharff, Oliver Smart, Wlodek Paciorek, Thomas Womack, Gérard Bricogne. Acta Crystallogr D Biol Crystallogr 2011
667
4


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.