A citation-based method for searching scientific literature

Y Komine, M Kitabatake, T Yokogawa, K Nishikawa, H Inokuchi. Proc Natl Acad Sci U S A 1994
Times Cited: 341







List of co-cited articles
1769 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity




Escherichia coli YaeJ protein mediates a novel ribosome-rescue pathway distinct from SsrA- and ArfA-mediated pathways.
Yuhei Chadani, Katsuhiko Ono, Kazuhiro Kutsukake, Tatsuhiko Abo. Mol Microbiol 2011
97
32

Ribosome rescue by Escherichia coli ArfA (YhdL) in the absence of trans-translation system.
Yuhei Chadani, Katsuhiko Ono, Shin-Ichiro Ozawa, Yuichiro Takahashi, Kazuyuki Takai, Hideaki Nanamiya, Yuzuru Tozawa, Kazuhiro Kutsukake, Tatsuhiko Abo. Mol Microbiol 2010
102
31


Structural basis for functional mimicry of long-variable-arm tRNA by transfer-messenger RNA.
Yoshitaka Bessho, Rie Shibata, Shun-ichi Sekine, Kazutaka Murayama, Kyoko Higashijima, Chie Hori-Takemoto, Mikako Shirouzu, Seiki Kuramitsu, Shigeyuki Yokoyama. Proc Natl Acad Sci U S A 2007
81
34

The tmRNA system for translational surveillance and ribosome rescue.
Sean D Moore, Robert T Sauer. Annu Rev Biochem 2007
227
25


RNase R degrades non-stop mRNAs selectively in an SmpB-tmRNA-dependent manner.
Jamie Richards, Preeti Mehta, A Wall Karzai. Mol Microbiol 2006
100
24

tRNA-like structures in 10Sa RNAs of Mycoplasma capricolum and Bacillus subtilis.
C Ushida, H Himeno, T Watanabe, A Muto. Nucleic Acids Res 1994
134
22

Crystal structure of the transfer-RNA domain of transfer-messenger RNA in complex with SmpB.
Sascha Gutmann, Peter W Haebel, Laurent Metzinger, Markus Sutter, Brice Felden, Nenad Ban. Nature 2003
96
22

tmRNA regulates synthesis of the ArfA ribosome rescue factor.
Fernando Garza-Sánchez, Ryan E Schaub, Brian D Janssen, Christopher S Hayes. Mol Microbiol 2011
64
34

Decoding in the absence of a codon by tmRNA and SmpB in the ribosome.
Cajetan Neubauer, Reynald Gillet, Ann C Kelley, V Ramakrishnan. Science 2012
77
28

Ribosome rescue by tmRNA requires truncated mRNAs.
Natalia Ivanova, Michael Y Pavlov, Brice Felden, Måns Ehrenberg. J Mol Biol 2004
97
21

The RNA moiety of ribonuclease P is the catalytic subunit of the enzyme.
C Guerrier-Takada, K Gardiner, T Marsh, N Pace, S Altman. Cell 1983
21

Biology of trans-translation.
Kenneth C Keiler. Annu Rev Microbiol 2008
164
21

Visualizing tmRNA entry into a stalled ribosome.
Mikel Valle, Reynald Gillet, Sukhjit Kaur, Anke Henne, V Ramakrishnan, Joachim Frank. Science 2003
115
20

C-terminal extension of truncated recombinant proteins in Escherichia coli with a 10Sa RNA decapeptide.
G F Tu, G E Reid, J G Zhang, R L Moritz, R J Simpson. J Biol Chem 1995
195
20


Charged tmRNA but not tmRNA-mediated proteolysis is essential for Neisseria gonorrhoeae viability.
C Huang, M C Wolfgang, J Withey, M Koomey, D I Friedman. EMBO J 2000
104
19


Requirement of transfer-messenger RNA for the growth of Bacillus subtilis under stresses.
A Muto, A Fujihara, K I Ito, J Matsuno, C Ushida, H Himeno. Genes Cells 2000
96
19



RNase II is important for A-site mRNA cleavage during ribosome pausing.
Fernando Garza-Sánchez, Shinichiro Shoji, Kurt Fredrick, Christopher S Hayes. Mol Microbiol 2009
35
51


A previously uncharacterized role for small protein B (SmpB) in transfer messenger RNA-mediated trans-translation.
Thomas R Sundermeier, Daniel P Dulebohn, Hye Jin Cho, A Wali Karzai. Proc Natl Acad Sci U S A 2005
68
26


Ribonuclease E provides substrates for ribonuclease P-dependent processing of a polycistronic mRNA.
P Alifano, F Rivellini, C Piscitelli, C M Arraiano, C B Bruni, M S Carlomagno. Genes Dev 1994
119
18

Visualizing the transfer-messenger RNA as the ribosome resumes translation.
Jie Fu, Yaser Hashem, Iwona Wower, Jianlin Lei, Hstau Y Liao, Christian Zwieb, Jacek Wower, Joachim Frank. EMBO J 2010
31
58

tmRNA-SmpB: a journey to the centre of the bacterial ribosome.
Félix Weis, Patrick Bron, Emmanuel Giudice, Jean-Paul Rolland, Daniel Thomas, Brice Felden, Reynald Gillet. EMBO J 2010
41
43

Simultaneous and functional binding of SmpB and EF-Tu-TP to the alanyl acceptor arm of tmRNA.
S Barends, A W Karzai, R T Sauer, J Wower, B Kraal. J Mol Biol 2001
88
19

A functional interaction of SmpB with tmRNA for determination of the resuming point of trans-translation.
Takayuki Konno, Daisuke Kurita, Kazuma Takada, Akira Muto, Hyouta Himeno. RNA 2007
37
45

SmpB functions in various steps of trans-translation.
Kyoko Hanawa-Suetsugu, Mitsuru Takagi, Hachiro Inokuchi, Hyouta Himeno, Akira Muto. Nucleic Acids Res 2002
71
23

Lon protease degrades transfer-messenger RNA-tagged proteins.
Jennifer S Choy, Latt Latt Aung, A Wali Karzai. J Bacteriol 2007
77
22

Structural basis for the rescue of stalled ribosomes: structure of YaeJ bound to the ribosome.
Matthieu G Gagnon, Sai V Seetharaman, David Bulkley, Thomas A Steitz. Science 2012
75
22

The complex of tmRNA-SmpB and EF-G on translocating ribosomes.
David J F Ramrath, Hiroshi Yamamoto, Kristian Rother, Daniela Wittek, Markus Pech, Thorsten Mielke, Justus Loerke, Patrick Scheerer, Pavel Ivanov, Yoshika Teraoka,[...]. Nature 2012
59
28

Interaction of SmpB with ribosome from directed hydroxyl radical probing.
Daisuke Kurita, Rumi Sasaki, Akira Muto, Hyouta Himeno. Nucleic Acids Res 2007
39
41

SsrA-mediated trans-translation plays a role in mRNA quality control by facilitating degradation of truncated mRNAs.
Yasufumi Yamamoto, Takafumi Sunohara, Kaoru Jojima, Toshifumi Inada, Hiroji Aiba. RNA 2003
80
20



Resuming translation on tmRNA: a unique mode of determining a reading frame.
K P Williams, K A Martindale, D P Bartel. EMBO J 1999
86
18

Ribosome hijacking: a role for small protein B during trans-translation.
Sylvie Nonin-Lecomte, Noella Germain-Amiot, Reynald Gillet, Marc Hallier, Luc Ponchon, Frédéric Dardel, Brice Felden. EMBO Rep 2009
34
47

SsrA-mediated protein tagging in the presence of miscoding drugs and its physiological role in Escherichia coli.
Tatsuhiko Abo, Koji Ueda, Takafumi Sunohara, Kazuko Ogawa, Hiroji Aiba. Genes Cells 2002
67
23


ArfA recruits release factor 2 to rescue stalled ribosomes by peptidyl-tRNA hydrolysis in Escherichia coli.
Yuhei Chadani, Koreaki Ito, Kazuhiro Kutsukake, Tatsuhiko Abo. Mol Microbiol 2012
63
25

ArfA recruits RF2 into stalled ribosomes.
Yoshihiro Shimizu. J Mol Biol 2012
54
29

Structure of a bacterial ribonuclease P holoenzyme in complex with tRNA.
Nicholas J Reiter, Amy Osterman, Alfredo Torres-Larios, Kerren K Swinger, Tao Pan, Alfonso Mondragón. Nature 2010
193
15

trans-translation-mediated tight regulation of the expression of the alternative ribosome-rescue factor ArfA in Escherichia coli.
Yuhei Chadani, Emi Matsumoto, Hiroaki Aso, Takeo Wada, Kazuhiro Kutsukake, Shizuyo Sutou, Tatsuhiko Abo. Genes Genet Syst 2011
36
41



Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.