CoCites: A citation-based method for searching scientific literature

Rp-phosphorothioate modifications in RNase P RNA that interfere with tRNA binding.

W D Hardt, J M Warnecke, V A Erdmann, R K Hartmann. EMBO J 1995
Times Cited: 67

List of co-cited articles
551 articles co-cited >1

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Identification of phosphates involved in catalysis by the ribozyme RNase P RNA.
M E Harris, N R Pace. RNA 1995

106

The RNA moiety of ribonuclease P is the catalytic subunit of the enzyme.
C Guerrier-Takada, K Gardiner, T Marsh, N Pace, S Altman. Cell 1983

1778

Use of photoaffinity crosslinking and molecular modeling to analyze the global architecture of ribonuclease P RNA.
M E Harris, J M Nolan, A Malhotra, J W Brown, S C Harvey, N R Pace. EMBO J 1994

165

Multiple magnesium ions in the ribonuclease P reaction mechanism.
D Smith, N R Pace. Biochemistry 1993

206

Base pairing between Escherichia coli RNase P RNA and its substrate.
L A Kirsebom, S G Svärd. EMBO J 1994

185

Further perspective on the catalytic core and secondary structure of ribonuclease P RNA.
E S Haas, J W Brown, C Pitulle, N R Pace. Proc Natl Acad Sci U S A 1994

128

Influence of metal ions on the ribonuclease P reaction. Distinguishing substrate binding from catalysis.
D Smith, A B Burgin, E S Haas, N R Pace. J Biol Chem 1992

132

Ribonuclease P (RNase P) RNA is converted to a Cd(2+)-ribozyme by a single Rp-phosphorothioate modification in the precursor tRNA at the RNase P cleavage site.
J M Warnecke, J P Fürste, W D Hardt, V A Erdmann, R K Hartmann. Proc Natl Acad Sci U S A 1996

112

Mapping the active site of ribonuclease P RNA using a substrate containing a photoaffinity agent.
A B Burgin, N R Pace. EMBO J 1990

157

Three-dimensional working model of M1 RNA, the catalytic RNA subunit of ribonuclease P from Escherichia coli.
E Westhof, S Altman. Proc Natl Acad Sci U S A 1994

Phylogenetic comparative chemical footprint analysis of the interaction between ribonuclease P RNA and tRNA.
T E LaGrandeur, A Hüttenhofer, H F Noller, N R Pace. EMBO J 1994

Helix P4 is a divalent metal ion binding site in the conserved core of the ribonuclease P ribozyme.
E L Christian, N M Kaye, M E Harris. RNA 2000

Interaction of the 3'-end of tRNA with ribonuclease P RNA.
B K Oh, N R Pace. Nucleic Acids Res 1994

126

Comparative photocross-linking analysis of the tertiary structures of Escherichia coli and Bacillus subtilis RNase P RNAs.
J L Chen, J M Nolan, M E Harris, N R Pace. EMBO J 1998

103

Derivation of the three-dimensional architecture of bacterial ribonuclease P RNAs from comparative sequence analysis.
C Massire, L Jaeger, E Westhof. J Mol Biol 1998

190

Higher order folding and domain analysis of the ribozyme from Bacillus subtilis ribonuclease P.
T Pan. Biochemistry 1995

130

Circularly permuted tRNAs as specific photoaffinity probes of ribonuclease P RNA structure.
J M Nolan, D H Burke, N R Pace. Science 1993

106

Model substrates for an RNA enzyme.
W H McClain, C Guerrier-Takada, S Altman. Science 1987

246

A kinetic mechanism for cleavage of precursor tRNA(Asp) catalyzed by the RNA component of Bacillus subtilis ribonuclease P.
J A Beebe, C A Fierke. Biochemistry 1994

135

Gel retardation analysis of E. coli M1 RNA-tRNA complexes.
W D Hardt, J Schlegl, V A Erdmann, R K Hartmann. Nucleic Acids Res 1993

Ribonuclease P: unity and diversity in a tRNA processing ribozyme.
D N Frank, N R Pace. Annu Rev Biochem 1998

346

Evolutionary perspective on the structure and function of ribonuclease P, a ribozyme.
N R Pace, J W Brown. J Bacteriol 1995

165

Probing of tertiary interactions in RNA: 2'-hydroxyl-base contacts between the RNase P RNA and pre-tRNA.
T Pan, A Loria, K Zhong. Proc Natl Acad Sci U S A 1995

Protein component of the ribozyme ribonuclease P alters substrate recognition by directly contacting precursor tRNA.
S Niranjanakumari, T Stams, S M Crary, D W Christianson, C A Fierke. Proc Natl Acad Sci U S A 1998

140

Protein component of Bacillus subtilis RNase P specifically enhances the affinity for precursor-tRNAAsp.
J C Kurz, S Niranjanakumari, C A Fierke. Biochemistry 1998

141

Magnesium ions are required by Bacillus subtilis ribonuclease P RNA for both binding and cleaving precursor tRNAAsp.
J A Beebe, J C Kurz, C A Fierke. Biochemistry 1996

100

Lead-ion-induced cleavage of RNase P RNA.
J Ciesiolka, W D Hardt, J Schlegl, V A Erdmann, R K Hartmann. Eur J Biochem 1994

Modification interference approach to detect ribose moieties important for the optimal activity of a ribozyme.
R K Gaur, G Krupp. Nucleic Acids Res 1993

Analysis of the tertiary structure of the ribonuclease P ribozyme-substrate complex by site-specific photoaffinity crosslinking.
M E Harris, A V Kazantsev, J L Chen, N R Pace. RNA 1997

Guanosine 2-NH2 groups of Escherichia coli RNase P RNA involved in intramolecular tertiary contacts and direct interactions with tRNA.
C Heide, T Pfeiffer, J M Nolan, R K Hartmann. RNA 1999

Identification by modification-interference of purine N-7 and ribose 2'-OH groups critical for catalysis by bacterial ribonuclease P.
A V Kazantsev, N R Pace. RNA 1998

Identification of individual nucleotides in the bacterial ribonuclease P ribozyme adjacent to the pre-tRNA cleavage site by short-range photo-cross-linking.
E L Christian, D S McPheeters, M E Harris. Biochemistry 1998

The protein component of Bacillus subtilis ribonuclease P increases catalytic efficiency by enhancing interactions with the 5' leader sequence of pre-tRNAAsp.
S M Crary, S Niranjanakumari, C A Fierke. Biochemistry 1998

109

Analysis of the role of phosphate oxygens in the group I intron from Tetrahymena.
E L Christian, M Yarus. J Mol Biol 1992

Different cleavage sites are aligned differently in the active site of M1 RNA, the catalytic subunit of Escherichia coli RNase P.
J Kufel, L A Kirsebom. Proc Natl Acad Sci U S A 1996

Role of the protein moiety of ribonuclease P, a ribonucleoprotein enzyme.
C Reich, G J Olsen, B Pace, N R Pace. Science 1988

211

Metal ion requirements and other aspects of the reaction catalyzed by M1 RNA, the RNA subunit of ribonuclease P from Escherichia coli.
C Guerrier-Takada, K Haydock, L Allen, S Altman. Biochemistry 1986

163

Recognition of the T stem-loop of a pre-tRNA substrate by the ribozyme from Bacillus subtilis ribonuclease P.
A Loria, T Pan. Biochemistry 1997

Rp-deoxy-phosphorothioate modification interference experiments identify 2'-OH groups in RNase P RNA that are crucial to tRNA binding.
W D Hardt, V A Erdmann, R K Hartmann. RNA 1996

Ribonuclease P catalysis requires Mg2+ coordinated to the pro-RP oxygen of the scissile bond.
Y Chen, X Li, P Gegenheimer. Biochemistry 1997

Ribonuclease P protein structure: evolutionary origins in the translational apparatus.
T Stams, S Niranjanakumari, C A Fierke, D W Christianson. Science 1998

129

Mapping in three dimensions of regions in a catalytic RNA protected from attack by an Fe(II)-EDTA reagent.
E Westhof, D Wesolowski, S Altman. J Mol Biol 1996

Kinetics and thermodynamics of the RNase P RNA cleavage reaction: analysis of tRNA 3'-end variants.
W D Hardt, J Schlegl, V A Erdmann, R K Hartmann. J Mol Biol 1995

Identification of adenosine functional groups involved in substrate binding by the ribonuclease P ribozyme.
D Siew, N H Zahler, A G Cassano, S A Strobel, M E Harris. Biochemistry 1999

Metal ion catalysis in the Tetrahymena ribozyme reaction.
J A Piccirilli, J S Vyle, M H Caruthers, T R Cech. Nature 1993

304

Domain structure of the ribozyme from eubacterial ribonuclease P.
A Loria, T Pan. RNA 1996

151

Site-specific cleavage by metal ion cofactors and inhibitors of M1 RNA, the catalytic subunit of RNase P from Escherichia coli.
S Kazakov, S Altman. Proc Natl Acad Sci U S A 1991

107

RNase P RNAs from some Archaea are catalytically active.
J A Pannucci, E S Haas, T A Hall, J K Harris, J W Brown. Proc Natl Acad Sci U S A 1999

179

Important 2'-hydroxyl groups in model substrates for M1 RNA, the catalytic RNA subunit of RNase P from Escherichia coli.
J P Perreault, S Altman. J Mol Biol 1992

Product release is a rate-limiting step during cleavage by the catalytic RNA subunit of Escherichia coli RNase P.
A Tallsjö, L A Kirsebom. Nucleic Acids Res 1993

Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.

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