A citation-based method for searching scientific literature

A M Aguinaldo, J M Turbeville, L S Linford, M C Rivera, J R Garey, R A Raff, J A Lake. Nature 1997
Times Cited: 917







List of co-cited articles
727 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Broad phylogenomic sampling improves resolution of the animal tree of life.
Casey W Dunn, Andreas Hejnol, David Q Matus, Kevin Pang, William E Browne, Stephen A Smith, Elaine Seaver, Greg W Rouse, Matthias Obst, Gregory D Edgecombe,[...]. Nature 2008
22

Current Understanding of Ecdysozoa and its Internal Phylogenetic Relationships.
Gonzalo Giribet, Gregory D Edgecombe. Integr Comp Biol 2017
51
29

Assessing the root of bilaterian animals with scalable phylogenomic methods.
Andreas Hejnol, Matthias Obst, Alexandros Stamatakis, Michael Ott, Greg W Rouse, Gregory D Edgecombe, Pedro Martinez, Jaume Baguñà, Xavier Bailly, Ulf Jondelius,[...]. Proc Biol Sci 2009
440
12


IQ-TREE: a fast and effective stochastic algorithm for estimating maximum-likelihood phylogenies.
Lam-Tung Nguyen, Heiko A Schmidt, Arndt von Haeseler, Bui Quang Minh. Mol Biol Evol 2015
11


The genome of the ctenophore Mnemiopsis leidyi and its implications for cell type evolution.
Joseph F Ryan, Kevin Pang, Christine E Schnitzler, Anh-Dao Nguyen, R Travis Moreland, David K Simmons, Bernard J Koch, Warren R Francis, Paul Havlak, Stephen A Smith,[...]. Science 2013
395
10

Spiralian phylogeny informs the evolution of microscopic lineages.
Christopher E Laumer, Nicolas Bekkouche, Alexandra Kerbl, Freya Goetz, Ricardo C Neves, Martin V Sørensen, Reinhardt M Kristensen, Andreas Hejnol, Casey W Dunn, Gonzalo Giribet,[...]. Curr Biol 2015
130
10

Genomic data do not support comb jellies as the sister group to all other animals.
Davide Pisani, Walker Pett, Martin Dohrmann, Roberto Feuda, Omar Rota-Stabelli, Hervé Philippe, Nicolas Lartillot, Gert Wörheide. Proc Natl Acad Sci U S A 2015
167
9

Xenacoelomorpha is the sister group to Nephrozoa.
Johanna Taylor Cannon, Bruno Cossermelli Vellutini, Julian Smith, Fredrik Ronquist, Ulf Jondelius, Andreas Hejnol. Nature 2016
156
9

The Compact Body Plan of Tardigrades Evolved by the Loss of a Large Body Region.
Frank W Smith, Thomas C Boothby, Ilaria Giovannini, Lorena Rebecchi, Elizabeth L Jockusch, Bob Goldstein. Curr Biol 2016
50
18


The ctenophore genome and the evolutionary origins of neural systems.
Leonid L Moroz, Kevin M Kocot, Mathew R Citarella, Sohn Dosung, Tigran P Norekian, Inna S Povolotskaya, Anastasia P Grigorenko, Christopher Dailey, Eugene Berezikov, Katherine M Buckley,[...]. Nature 2014
367
9

Extremotolerant tardigrade genome and improved radiotolerance of human cultured cells by tardigrade-unique protein.
Takuma Hashimoto, Daiki D Horikawa, Yuki Saito, Hirokazu Kuwahara, Hiroko Kozuka-Hata, Tadasu Shin-I, Yohei Minakuchi, Kazuko Ohishi, Ayuko Motoyama, Tomoyuki Aizu,[...]. Nat Commun 2016
130
9

Evidence from 18S ribosomal DNA that the lophophorates are protostome animals.
K M Halanych, J D Bacheller, A M Aguinaldo, S M Liva, D M Hillis, J A Lake. Science 1995
277
9

Hallucigenia's onychophoran-like claws and the case for Tactopoda.
Martin R Smith, Javier Ortega-Hernández. Nature 2014
61
13

MicroRNAs and phylogenomics resolve the relationships of Tardigrada and suggest that velvet worms are the sister group of Arthropoda.
Lahcen I Campbell, Omar Rota-Stabelli, Gregory D Edgecombe, Trevor Marchioro, Stuart J Longhorn, Maximilian J Telford, Hervé Philippe, Lorena Rebecchi, Kevin J Peterson, Davide Pisani. Proc Natl Acad Sci U S A 2011
131
8

A transcriptome approach to ecdysozoan phylogeny.
Janus Borner, Peter Rehm, Ralph O Schill, Ingo Ebersberger, Thorsten Burmester. Mol Phylogenet Evol 2014
62
12

PhyloBayes MPI: phylogenetic reconstruction with infinite mixtures of profiles in a parallel environment.
Nicolas Lartillot, Nicolas Rodrigue, Daniel Stubbs, Jacques Richer. Syst Biol 2013
416
8

Error, signal, and the placement of Ctenophora sister to all other animals.
Nathan V Whelan, Kevin M Kocot, Leonid L Moroz, Kenneth M Halanych. Proc Natl Acad Sci U S A 2015
175
8

New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0.
Stéphane Guindon, Jean-François Dufayard, Vincent Lefort, Maria Anisimova, Wim Hordijk, Olivier Gascuel. Syst Biol 2010
8


A Large and Consistent Phylogenomic Dataset Supports Sponges as the Sister Group to All Other Animals.
Paul Simion, Hervé Philippe, Denis Baurain, Muriel Jager, Daniel J Richter, Arnaud Di Franco, Béatrice Roure, Nori Satoh, Éric Quéinnec, Alexander Ereskovsky,[...]. Curr Biol 2017
221
8

Revisiting metazoan phylogeny with genomic sampling of all phyla.
Christopher E Laumer, Rosa Fernández, Sarah Lemer, David Combosch, Kevin M Kocot, Ana Riesgo, Sónia C S Andrade, Wolfgang Sterrer, Martin V Sørensen, Gonzalo Giribet. Proc Biol Sci 2019
81
9

Arthropod fossil data increase congruence of morphological and molecular phylogenies.
David A Legg, Mark D Sutton, Gregory D Edgecombe. Nat Commun 2013
120
7

Acoelomorph flatworms are deuterostomes related to Xenoturbella.
Hervé Philippe, Henner Brinkmann, Richard R Copley, Leonid L Moroz, Hiroaki Nakano, Albert J Poustka, Andreas Wallberg, Kevin J Peterson, Maximilian J Telford. Nature 2011
236
7

The tardigrade Hypsibius dujardini, a new model for studying the evolution of development.
Willow N Gabriel, Robert McNuff, Sapna K Patel, T Ryan Gregory, William R Jeck, Corbin D Jones, Bob Goldstein. Dev Biol 2007
72
9

Molecular architecture of annelid nerve cord supports common origin of nervous system centralization in bilateria.
Alexandru S Denes, Gáspár Jékely, Patrick R H Steinmetz, Florian Raible, Heidi Snyman, Benjamin Prud'homme, David E K Ferrier, Guillaume Balavoine, Detlev Arendt. Cell 2007
285
7

No evidence for extensive horizontal gene transfer in the genome of the tardigrade Hypsibius dujardini.
Georgios Koutsovoulos, Sujai Kumar, Dominik R Laetsch, Lewis Stevens, Jennifer Daub, Claire Conlon, Habib Maroon, Fran Thomas, Aziz A Aboobaker, Mark Blaxter. Proc Natl Acad Sci U S A 2016
135
7

Evidence for extensive horizontal gene transfer from the draft genome of a tardigrade.
Thomas C Boothby, Jennifer R Tenlen, Frank W Smith, Jeremy R Wang, Kiera A Patanella, Erin Osborne Nishimura, Sophia C Tintori, Qing Li, Corbin D Jones, Mark Yandell,[...]. Proc Natl Acad Sci U S A 2015
91
7


Insights into bilaterian evolution from three spiralian genomes.
Oleg Simakov, Ferdinand Marletaz, Sung-Jin Cho, Eric Edsinger-Gonzales, Paul Havlak, Uffe Hellsten, Dian-Han Kuo, Tomas Larsson, Jie Lv, Detlev Arendt,[...]. Nature 2013
377
7

Selective neuronal staining in tardigrades and onychophorans provides insights into the evolution of segmental ganglia in panarthropods.
Georg Mayer, Christine Martin, Jan Rüdiger, Susann Kauschke, Paul A Stevenson, Izabela Poprawa, Karin Hohberg, Ralph O Schill, Hans-Joachim Pflüger, Martin Schlegel. BMC Evol Biol 2013
44
13

Neural markers reveal a one-segmented head in tardigrades (water bears).
Georg Mayer, Susann Kauschke, Jan Rüdiger, Paul A Stevenson. PLoS One 2013
43
13

The evolution of the Ecdysozoa.
Maximilian J Telford, Sarah J Bourlat, Andrew Economou, Daniel Papillon, Omar Rota-Stabelli. Philos Trans R Soc Lond B Biol Sci 2008
108
6

Arthropod relationships revealed by phylogenomic analysis of nuclear protein-coding sequences.
Jerome C Regier, Jeffrey W Shultz, Andreas Zwick, April Hussey, Bernard Ball, Regina Wetzer, Joel W Martin, Clifford W Cunningham. Nature 2010
536
6

Phylogenomic Insights into Animal Evolution.
Maximilian J Telford, Graham E Budd, Hervé Philippe. Curr Biol 2015
89
6


Ecdysozoan mitogenomics: evidence for a common origin of the legged invertebrates, the Panarthropoda.
Omar Rota-Stabelli, Ehsan Kayal, Dianne Gleeson, Jennifer Daub, Jeffrey L Boore, Maximilian J Telford, Davide Pisani, Mark Blaxter, Dennis V Lavrov. Genome Biol Evol 2010
94
6




MrBayes 3: Bayesian phylogenetic inference under mixed models.
Fredrik Ronquist, John P Huelsenbeck. Bioinformatics 2003
6

Sea anemone genome reveals ancestral eumetazoan gene repertoire and genomic organization.
Nicholas H Putnam, Mansi Srivastava, Uffe Hellsten, Bill Dirks, Jarrod Chapman, Asaf Salamov, Astrid Terry, Harris Shapiro, Erika Lindquist, Vladimir V Kapitonov,[...]. Science 2007
6

Comparative genomics of the tardigrades Hypsibius dujardini and Ramazzottius varieornatus.
Yuki Yoshida, Georgios Koutsovoulos, Dominik R Laetsch, Lewis Stevens, Sujai Kumar, Daiki D Horikawa, Kyoko Ishino, Shiori Komine, Takekazu Kunieda, Masaru Tomita,[...]. PLoS Biol 2017
92
6

Inversion of dorsoventral axis?
D Arendt, K Nübler-Jung. Nature 1994
185
6

Suppression of long-branch attraction artefacts in the animal phylogeny using a site-heterogeneous model.
Nicolas Lartillot, Henner Brinkmann, Hervé Philippe. BMC Evol Biol 2007
366
6



Genome sequencing of a single tardigrade Hypsibius dujardini individual.
Kazuharu Arakawa, Yuki Yoshida, Masaru Tomita. Sci Data 2016
27
22


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.