A citation-based method for searching scientific literature


List of co-cited articles
1285 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


The yeast Rat1 exonuclease promotes transcription termination by RNA polymerase II.
Minkyu Kim, Nevan J Krogan, Lidia Vasiljeva, Oliver J Rando, Eduard Nedea, Jack F Greenblatt, Stephen Buratowski. Nature 2004
358
29



Structure and function of the 5'-->3' exoribonuclease Rat1 and its activating partner Rai1.
Song Xiang, Amalene Cooper-Morgan, Xinfu Jiao, Megerditch Kiledjian, James L Manley, Liang Tong. Nature 2009
134
23


Saccharomyces cerevisiae RAI1 (YGL246c) is homologous to human DOM3Z and encodes a protein that binds the nuclear exoribonuclease Rat1p.
Y Xue, X Bai, I Lee, G Kallstrom, J Ho, J Brown, A Stevens, A W Johnson. Mol Cell Biol 2000
90
23

Processing of the precursors to small nucleolar RNAs and rRNAs requires common components.
E Petfalski, T Dandekar, Y Henry, D Tollervey. Mol Cell Biol 1998
168
21

The 5' end of yeast 5.8S rRNA is generated by exonucleases from an upstream cleavage site.
Y Henry, H Wood, J P Morrissey, E Petfalski, S Kearsey, D Tollervey. EMBO J 1994
259
20


Identification of a regulated pathway for nuclear pre-mRNA turnover.
C Bousquet-Antonelli, C Presutti, D Tollervey. Cell 2000
311
19




RNA degradation by the exosome is promoted by a nuclear polyadenylation complex.
John LaCava, Jonathan Houseley, Cosmin Saveanu, Elisabeth Petfalski, Elizabeth Thompson, Alain Jacquier, David Tollervey. Cell 2005
669
17


Degradation of several hypomodified mature tRNA species in Saccharomyces cerevisiae is mediated by Met22 and the 5'-3' exonucleases Rat1 and Xrn1.
Irina Chernyakov, Joseph M Whipple, Lakmal Kotelawala, Elizabeth J Grayhack, Eric M Phizicky. Genes Dev 2008
182
17

Functions of the exosome in rRNA, snoRNA and snRNA synthesis.
C Allmang, J Kufel, G Chanfreau, P Mitchell, E Petfalski, D Tollervey. EMBO J 1999
456
16

The enzymes and control of eukaryotic mRNA turnover.
Roy Parker, Haiwei Song. Nat Struct Mol Biol 2004
612
16


Mutational analysis of exoribonuclease I from Saccharomyces cerevisiae.
A M Page, K Davis, C Molineux, R D Kolodner, A W Johnson. Nucleic Acids Res 1998
39
38




Cryptic pol II transcripts are degraded by a nuclear quality control pathway involving a new poly(A) polymerase.
Françoise Wyers, Mathieu Rougemaille, Gwenaël Badis, Jean-Claude Rousselle, Marie-Elisabeth Dufour, Jocelyne Boulay, Béatrice Régnault, Frédéric Devaux, Abdelkader Namane, Bertrand Séraphin,[...]. Cell 2005
653
14



AtXRN4 degrades mRNA in Arabidopsis and its substrates include selected miRNA targets.
Frédéric F Souret, James P Kastenmayer, Pamela J Green. Mol Cell 2004
241
13

The Rat1p 5' to 3' exonuclease degrades telomeric repeat-containing RNA and promotes telomere elongation in Saccharomyces cerevisiae.
Brian Luke, Andrea Panza, Sophie Redon, Nahid Iglesias, Zhijian Li, Joachim Lingner. Mol Cell 2008
209
13

Nuclear surveillance and degradation of hypomodified initiator tRNAMet in S. cerevisiae.
Sujatha Kadaba, Anna Krueger, Tamyra Trice, Annette M Krecic, Alan G Hinnebusch, James Anderson. Genes Dev 2004
371
12


Efficient termination of transcription by RNA polymerase I requires the 5' exonuclease Rat1 in yeast.
Aziz El Hage, Michal Koper, Joanna Kufel, David Tollervey. Genes Dev 2008
76
15

Identification of a quality-control mechanism for mRNA 5'-end capping.
Xinfu Jiao, Song Xiang, Chanseok Oh, Charles E Martin, Liang Tong, Megerditch Kiledjian. Nature 2010
108
12

XUTs are a class of Xrn1-sensitive antisense regulatory non-coding RNA in yeast.
E L van Dijk, C L Chen, Y d'Aubenton-Carafa, S Gourvennec, M Kwapisz, V Roche, C Bertrand, M Silvain, P Legoix-Né, S Loeillet,[...]. Nature 2011
248
12


Identification and developmental expression of a 5'-3' exoribonuclease from Drosophila melanogaster.
D D Till, B Linz, J E Seago, S J Elgar, P E Marujo, M L Elias, C M Arraiano, J A McClellan, J E McCarthy, S F Newbury. Mech Dev 1998
41
26

RNAse III-mediated degradation of unspliced pre-mRNAs and lariat introns.
Michal Danin-Kreiselman, Chrissie Young Lee, Guillaume Chanfreau. Mol Cell 2003
106
11


RNA-quality control by the exosome.
Jonathan Houseley, John LaCava, David Tollervey. Nat Rev Mol Cell Biol 2006
476
11

Rrp17p is a eukaryotic exonuclease required for 5' end processing of Pre-60S ribosomal RNA.
Marlene Oeffinger, Daniel Zenklusen, Angelica Ferguson, Karen E Wei, Aziz El Hage, David Tollervey, Brian T Chait, Robert H Singer, Michael P Rout. Mol Cell 2009
55
20

XRN 5'→3' exoribonucleases: structure, mechanisms and functions.
Vinay K Nagarajan, Christopher I Jones, Sarah F Newbury, Pamela J Green. Biochim Biophys Acta 2013
188
11

A mouse cytoplasmic exoribonuclease (mXRN1p) with preference for G4 tetraplex substrates.
V I Bashkirov, H Scherthan, J A Solinger, J M Buerstedde, W D Heyer. J Cell Biol 1997
262
10


Rrp47p is an exosome-associated protein required for the 3' processing of stable RNAs.
Philip Mitchell, Elisabeth Petfalski, Rym Houalla, Alexandre Podtelejnikov, Matthias Mann, David Tollervey. Mol Cell Biol 2003
132
10


Eukaryotic mRNA decapping.
Jeff Coller, Roy Parker. Annu Rev Biochem 2004
367
10


A new yeast poly(A) polymerase complex involved in RNA quality control.
Stepánka Vanácová, Jeannette Wolf, Georges Martin, Diana Blank, Sabine Dettwiler, Arno Friedlein, Hanno Langen, Gérard Keith, Walter Keller. PLoS Biol 2005
453
10

Arabidopsis FIERY1, XRN2, and XRN3 are endogenous RNA silencing suppressors.
Isabelle Gy, Virginie Gasciolli, Dominique Lauressergues, Jean-Benoit Morel, Julie Gombert, Florence Proux, Caroline Proux, Hervé Vaucheret, Allison C Mallory. Plant Cell 2007
193
10




Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.