A citation-based method for searching scientific literature

T Tamada, K Kitadokoro, Y Higuchi, K Inaka, A Yasui, P E de Ruiter, A P Eker, K Miki. Nat Struct Biol 1997
Times Cited: 160







List of co-cited articles
971 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Crystal structure of DNA photolyase from Escherichia coli.
H W Park, S T Kim, A Sancar, J Deisenhofer. Science 1995
396
76


Crystal structure of a photolyase bound to a CPD-like DNA lesion after in situ repair.
Alexandra Mees, Tobias Klar, Petra Gnau, Ulrich Hennecke, Andre P M Eker, Thomas Carell, Lars-Oliver Essen. Science 2004
268
69

Crystal structure of thermostable DNA photolyase: pyrimidine-dimer recognition mechanism.
H Komori, R Masui, S Kuramitsu, S Yokoyama, T Shibata, Y Inoue, K Miki. Proc Natl Acad Sci U S A 2001
89
57

Identification of a new cryptochrome class. Structure, function, and evolution.
Ronald Brudler, Kenichi Hitomi, Hiromi Daiyasu, Hiroyuki Toh, Ken-ichi Kucho, Masahiro Ishiura, Minoru Kanehisa, Victoria A Roberts, Takeshi Todo, John A Tainer,[...]. Mol Cell 2003
228
39

Direct observation of thymine dimer repair in DNA by photolyase.
Ya-Ting Kao, Chaitanya Saxena, Lijuan Wang, Aziz Sancar, Dongping Zhong. Proc Natl Acad Sci U S A 2005
174
31


Structure of the photolyase-like domain of cryptochrome 1 from Arabidopsis thaliana.
Chad A Brautigam, Barbara S Smith, Zhiquan Ma, Maya Palnitkar, Diana R Tomchick, Mischa Machius, Johann Deisenhofer. Proc Natl Acad Sci U S A 2004
218
30

Intraprotein radical transfer during photoactivation of DNA photolyase.
C Aubert, M H Vos, P Mathis, A P Eker, K Brettel. Nature 2000
319
29

Crystal structure of cryptochrome 3 from Arabidopsis thaliana and its implications for photolyase activity.
Yihua Huang, Richard Baxter, Barbara S Smith, Carrie L Partch, Christopher L Colbert, Johann Deisenhofer. Proc Natl Acad Sci U S A 2006
93
29


Crystal structure of archaeal photolyase from Sulfolobus tokodaii with two FAD molecules: implication of a novel light-harvesting cofactor.
Masahiro Fujihashi, Nobutaka Numoto, Yukiko Kobayashi, Akira Mizushima, Masanari Tsujimura, Akira Nakamura, Yutaka Kawarabayasi, Kunio Miki. J Mol Biol 2007
56
44


A new photoreactivating enzyme that specifically repairs ultraviolet light-induced (6-4)photoproducts.
T Todo, H Takemori, H Ryo, M Ihara, T Matsunaga, O Nikaido, K Sato, T Nomura. Nature 1993
224
22

Cis-syn thymidine dimer repair by DNA photolyase in real time.
Alexander W MacFarlane, Robert J Stanley. Biochemistry 2003
74
29

Evidence for dinucleotide flipping by DNA photolyase.
B J Vande Berg, G B Sancar. J Biol Chem 1998
67
31

Identification of the second chromophore of Escherichia coli and yeast DNA photolyases as 5,10-methenyltetrahydrofolate.
J L Johnson, S Hamm-Alvarez, G Payne, G B Sancar, K V Rajagopalan, A Sancar. Proc Natl Acad Sci U S A 1988
146
21



Crystal structure and mechanism of a DNA (6-4) photolyase.
Melanie J Maul, Thomas R M Barends, Andreas F Glas, Max J Cryle, Tatiana Domratcheva, Sabine Schneider, Ilme Schlichting, Thomas Carell. Angew Chem Int Ed Engl 2008
139
21

Role of two histidines in the (6-4) photolyase reaction.
K Hitomi, H Nakamura, S T Kim, T Mizukoshi, T Ishikawa, S Iwai, T Todo. J Biol Chem 2001
96
20

Cryptochrome 3 from Arabidopsis thaliana: structural and functional analysis of its complex with a folate light antenna.
Tobias Klar, Richard Pokorny, Julia Moldt, Alfred Batschauer, Lars-Oliver Essen. J Mol Biol 2007
62
32

Functional motifs in the (6-4) photolyase crystal structure make a comparative framework for DNA repair photolyases and clock cryptochromes.
Kenichi Hitomi, Luciano DiTacchio, Andrew S Arvai, Junpei Yamamoto, Sang-Tae Kim, Takeshi Todo, John A Tainer, Shigenori Iwai, Satchidananda Panda, Elizabeth D Getzoff. Proc Natl Acad Sci U S A 2009
92
21


Reaction mechanism of (6-4) photolyase.
X Zhao, J Liu, D S Hsu, S Zhao, J S Taylor, A Sancar. J Biol Chem 1997
119
19



Natural and non-natural antenna chromophores in the DNA photolyase from Thermus thermophilus.
Tobias Klar, Gebhard Kaiser, Ulrich Hennecke, Thomas Carell, Alfred Batschauer, Lars-Oliver Essen. Chembiochem 2006
39
46

Recognition and repair of UV lesions in loop structures of duplex DNA by DASH-type cryptochrome.
Richard Pokorny, Tobias Klar, Ulrich Hennecke, Thomas Carell, Alfred Batschauer, Lars-Oliver Essen. Proc Natl Acad Sci U S A 2008
127
18




Identification of cryptochrome DASH from vertebrates.
Hiromi Daiyasu, Tomoko Ishikawa, Kei-ichi Kuma, Shigenori Iwai, Takeshi Todo, Hiroyuki Toh. Genes Cells 2004
86
19

The cryptochromes: blue light photoreceptors in plants and animals.
InĂªs Chaves, Richard Pokorny, Martin Byrdin, Nathalie Hoang, Thorsten Ritz, Klaus Brettel, Lars-Oliver Essen, Gijsbertus T J van der Horst, Alfred Batschauer, Margaret Ahmad. Annu Rev Plant Biol 2011
496
17



Bacterial cryptochrome and photolyase: characterization of two photolyase-like genes of Synechocystis sp. PCC6803.
K Hitomi, K Okamoto, H Daiyasu, H Miyashita, S Iwai, H Toh, M Ishiura, T Todo. Nucleic Acids Res 2000
84
19

Identification and characterization of a second chromophore of DNA photolyase from Thermus thermophilus HB27.
Takumi Ueda, Akira Kato, Seiki Kuramitsu, Hiroaki Terasawa, Ichio Shimada. J Biol Chem 2005
36
44

DNA photoreactivating enzyme from the cyanobacterium Anacystis nidulans.
A P Eker, P Kooiman, J K Hessels, A Yasui. J Biol Chem 1990
115
15

Purification and characterization of three members of the photolyase/cryptochrome family blue-light photoreceptors from Vibrio cholerae.
Erin N Worthington, I Halil Kavakli, Gloria Berrocal-Tito, Bruce E Bondo, Aziz Sancar. J Biol Chem 2003
83
18

Investigation of the cyclobutane pyrimidine dimer (CPD) photolyase DNA recognition mechanism by NMR analyses.
Takuya Torizawa, Takumi Ueda, Seiki Kuramitsu, Kenichi Hitomi, Takeshi Todo, Shigenori Iwai, Kosuke Morikawa, Ichio Shimada. J Biol Chem 2004
34
44

Mammalian Cry1 and Cry2 are essential for maintenance of circadian rhythms.
G T van der Horst, M Muijtjens, K Kobayashi, R Takano, S Kanno, M Takao, J de Wit, A Verkerk, A P Eker, D van Leenen,[...]. Nature 1999
995
15



Origin of the transient electron paramagnetic resonance signals in DNA photolyase.
Y M Gindt, E Vollenbroek, K Westphal, H Sackett, A Sancar, G T Babcock. Biochemistry 1999
62
22

Cyclobutylpyrimidine dimer base flipping by DNA photolyase.
Kathleen S Christine, Alexander W MacFarlane, Kongsheng Yang, Robert J Stanley. J Biol Chem 2002
60
23

A new class of DNA photolyases present in various organisms including aplacental mammals.
A Yasui, A P Eker, S Yasuhira, H Yajima, T Kobayashi, M Takao, A Oikawa. EMBO J 1994
159
14


Molecular evolution of the photolyase-blue-light photoreceptor family.
S Kanai, R Kikuno, H Toh, H Ryo, T Todo. J Mol Evol 1997
124
14



Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.