A citation-based method for searching scientific literature

E P Rogakou, D R Pilch, A H Orr, V S Ivanova, W M Bonner. J Biol Chem 1998
Times Cited: 3754







List of co-cited articles
380 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


A critical role for histone H2AX in recruitment of repair factors to nuclear foci after DNA damage.
T T Paull, E P Rogakou, V Yamazaki, C U Kirchgessner, M Gellert, W M Bonner. Curr Biol 2000
14

GammaH2AX and cancer.
William M Bonner, Christophe E Redon, Jennifer S Dickey, Asako J Nakamura, Olga A Sedelnikova, Stéphanie Solier, Yves Pommier. Nat Rev Cancer 2008
11

ATM phosphorylates histone H2AX in response to DNA double-strand breaks.
S Burma, B P Chen, M Murphy, A Kurimasa, D J Chen. J Biol Chem 2001
11

Megabase chromatin domains involved in DNA double-strand breaks in vivo.
E P Rogakou, C Boon, C Redon, W M Bonner. J Cell Biol 1999
10

The DNA-damage response in human biology and disease.
Stephen P Jackson, Jiri Bartek. Nature 2009
8


MDC1 directly binds phosphorylated histone H2AX to regulate cellular responses to DNA double-strand breaks.
Manuel Stucki, Julie A Clapperton, Duaa Mohammad, Michael B Yaffe, Stephen J Smerdon, Stephen P Jackson. Cell 2005
739
7

RNF168 ubiquitinates K13-15 on H2A/H2AX to drive DNA damage signaling.
Francesca Mattiroli, Joseph H A Vissers, Willem J van Dijk, Pauline Ikpa, Elisabetta Citterio, Wim Vermeulen, Jurgen A Marteijn, Titia K Sixma. Cell 2012
391
6



ATM, ATR, and DNA-PK: The Trinity at the Heart of the DNA Damage Response.
Andrew N Blackford, Stephen P Jackson. Mol Cell 2017
660
5

Transcriptionally active chromatin recruits homologous recombination at DNA double-strand breaks.
François Aymard, Beatrix Bugler, Christine K Schmidt, Emmanuelle Guillou, Pierre Caron, Sébastien Briois, Jason S Iacovoni, Virginie Daburon, Kyle M Miller, Stephen P Jackson,[...]. Nat Struct Mol Biol 2014
347
5

Histone H2A.Z controls a critical chromatin remodeling step required for DNA double-strand break repair.
Ye Xu, Marina K Ayrapetov, Chang Xu, Ozge Gursoy-Yuzugullu, Yiduo Hu, Brendan D Price. Mol Cell 2012
193
5

Comprehensive Mapping of Histone Modifications at DNA Double-Strand Breaks Deciphers Repair Pathway Chromatin Signatures.
Thomas Clouaire, Vincent Rocher, Anahita Lashgari, Coline Arnould, Marion Aguirrebengoa, Anna Biernacka, Magdalena Skrzypczak, François Aymard, Bernard Fongang, Norbert Dojer,[...]. Mol Cell 2018
94
5

A role for Saccharomyces cerevisiae histone H2A in DNA repair.
J A Downs, N F Lowndes, S P Jackson. Nature 2000
488
5

Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2.
Michael I Love, Wolfgang Huber, Simon Anders. Genome Biol 2014
5

The DNA damage response: making it safe to play with knives.
Alberto Ciccia, Stephen J Elledge. Mol Cell 2010
5

Causes and consequences of replication stress.
Michelle K Zeman, Karlene A Cimprich. Nat Cell Biol 2014
967
5

Emerging roles of linker histones in regulating chromatin structure and function.
Dmitry V Fyodorov, Bing-Rui Zhou, Arthur I Skoultchi, Yawen Bai. Nat Rev Mol Cell Biol 2018
160
4

Histone H1 couples initiation and amplification of ubiquitin signalling after DNA damage.
Tina Thorslund, Anita Ripplinger, Saskia Hoffmann, Thomas Wild, Michael Uckelmann, Bine Villumsen, Takeo Narita, Titia K Sixma, Chunaram Choudhary, Simon Bekker-Jensen,[...]. Nature 2015
218
4

Dephosphorylation of histone gamma-H2AX during repair of DNA double-strand breaks in mammalian cells and its inhibition by calyculin A.
I B Nazarov, A N Smirnova, R I Krutilina, M P Svetlova, L V Solovjeva, A A Nikiforov, S-L Oei, I A Zalenskaya, P M Yau, E M Bradbury,[...]. Radiat Res 2003
101
4

The molecular hallmarks of epigenetic control.
C David Allis, Thomas Jenuwein. Nat Rev Genet 2016
948
4

The Histone Chaperone FACT Coordinates H2A.X-Dependent Signaling and Repair of DNA Damage.
Sandra Piquet, Florent Le Parc, Siau-Kun Bai, Odile Chevallier, Salomé Adam, Sophie E Polo. Mol Cell 2018
34
11

H2AX Phosphorylation: Its Role in DNA Damage Response and Cancer Therapy.
Monika Podhorecka, Andrzej Skladanowski, Przemyslaw Bozko. J Nucleic Acids 2010
275
4


The DNA damage response: ten years after.
J Wade Harper, Stephen J Elledge. Mol Cell 2007
4

ATM and DNA-PK function redundantly to phosphorylate H2AX after exposure to ionizing radiation.
Tom Stiff, Mark O'Driscoll, Nicole Rief, Kuniyoshi Iwabuchi, Markus Löbrich, Penny A Jeggo. Cancer Res 2004
736
4

High-resolution profiling of histone methylations in the human genome.
Artem Barski, Suresh Cuddapah, Kairong Cui, Tae-Young Roh, Dustin E Schones, Zhibin Wang, Gang Wei, Iouri Chepelev, Keji Zhao. Cell 2007
4

RNF168 binds and amplifies ubiquitin conjugates on damaged chromosomes to allow accumulation of repair proteins.
Carsten Doil, Niels Mailand, Simon Bekker-Jensen, Patrice Menard, Dorthe Helena Larsen, Rainer Pepperkok, Jan Ellenberg, Stephanie Panier, Daniel Durocher, Jiri Bartek,[...]. Cell 2009
645
4

NIH Image to ImageJ: 25 years of image analysis.
Caroline A Schneider, Wayne S Rasband, Kevin W Eliceiri. Nat Methods 2012
4

Non-homologous DNA end joining and alternative pathways to double-strand break repair.
Howard H Y Chang, Nicholas R Pannunzio, Noritaka Adachi, Michael R Lieber. Nat Rev Mol Cell Biol 2017
564
4

Recent developments in the use of γ-H2AX as a quantitative DNA double-strand break biomarker.
Christophe E Redon, Asako J Nakamura, Olga A Martin, Palak R Parekh, Urbain S Weyemi, William M Bonner. Aging (Albany NY) 2011
126
4

Mechanisms of DNA damage, repair, and mutagenesis.
Nimrat Chatterjee, Graham C Walker. Environ Mol Mutagen 2017
383
4

ATM and ATR substrate analysis reveals extensive protein networks responsive to DNA damage.
Shuhei Matsuoka, Bryan A Ballif, Agata Smogorzewska, E Robert McDonald, Kristen E Hurov, Ji Luo, Corey E Bakalarski, Zhenming Zhao, Nicole Solimini, Yaniv Lerenthal,[...]. Science 2007
4

Fiji: an open-source platform for biological-image analysis.
Johannes Schindelin, Ignacio Arganda-Carreras, Erwin Frise, Verena Kaynig, Mark Longair, Tobias Pietzsch, Stephan Preibisch, Curtis Rueden, Stephan Saalfeld, Benjamin Schmid,[...]. Nat Methods 2012
4

H3K27 methylation: a promiscuous repressive chromatin mark.
Elizabeth T Wiles, Eric U Selker. Curr Opin Genet Dev 2017
87
4


Histone chaperone Anp32e removes H2A.Z from DNA double-strand breaks and promotes nucleosome reorganization and DNA repair.
Ozge Gursoy-Yuzugullu, Marina K Ayrapetov, Brendan D Price. Proc Natl Acad Sci U S A 2015
67
4

Human HDAC1 and HDAC2 function in the DNA-damage response to promote DNA nonhomologous end-joining.
Kyle M Miller, Jorrit V Tjeertes, Julia Coates, Gaëlle Legube, Sophie E Polo, Sébastien Britton, Stephen P Jackson. Nat Struct Mol Biol 2010
416
3

Roles of ATM and NBS1 in chromatin structure modulation and DNA double-strand break repair.
Elijahu Berkovich, Raymond J Monnat, Michael B Kastan. Nat Cell Biol 2007
348
3

Regulation of homologous recombination by RNF20-dependent H2B ubiquitination.
Kyosuke Nakamura, Akihiro Kato, Junya Kobayashi, Hiromi Yanagihara, Shuichi Sakamoto, Douglas V N P Oliveira, Mikio Shimada, Hiroshi Tauchi, Hidekazu Suzuki, Satoshi Tashiro,[...]. Mol Cell 2011
231
3

Bre1-dependent H2B ubiquitination promotes homologous recombination by stimulating histone eviction at DNA breaks.
Sihao Zheng, Dan Li, Zhen Lu, Guangxue Liu, Meng Wang, Poyuan Xing, Min Wang, Yang Dong, Xuejie Wang, Jingyao Li,[...]. Nucleic Acids Res 2018
19
15



Requirement of ATM-dependent monoubiquitylation of histone H2B for timely repair of DNA double-strand breaks.
Lilach Moyal, Yaniv Lerenthal, Mali Gana-Weisz, Gilad Mass, Sairei So, Shih-Ya Wang, Berina Eppink, Young Min Chung, Gil Shalev, Efrat Shema,[...]. Mol Cell 2011
257
3


gamma-H2AX dephosphorylation by protein phosphatase 2A facilitates DNA double-strand break repair.
Dipanjan Chowdhury, Michael-Christopher Keogh, Haruhiko Ishii, Craig L Peterson, Stephen Buratowski, Judy Lieberman. Mol Cell 2005
380
3

Histone degradation in response to DNA damage enhances chromatin dynamics and recombination rates.
Michael H Hauer, Andrew Seeber, Vijender Singh, Raphael Thierry, Ragna Sack, Assaf Amitai, Mariya Kryzhanovska, Jan Eglinger, David Holcman, Tom Owen-Hughes,[...]. Nat Struct Mol Biol 2017
120
3

SETD2-dependent histone H3K36 trimethylation is required for homologous recombination repair and genome stability.
Sophia X Pfister, Sara Ahrabi, Lykourgos-Panagiotis Zalmas, Sovan Sarkar, François Aymard, Csanád Z Bachrati, Thomas Helleday, Gaëlle Legube, Nicholas B La Thangue, Andrew C G Porter,[...]. Cell Rep 2014
250
3

ATM-dependent chromatin changes silence transcription in cis to DNA double-strand breaks.
Niraj M Shanbhag, Ilona U Rafalska-Metcalf, Carlo Balane-Bolivar, Susan M Janicki, Roger A Greenberg. Cell 2010
471
3


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.