A citation-based method for searching scientific literature

G Miesenböck, D A De Angelis, J E Rothman. Nature 1998
Times Cited: 1753







List of co-cited articles
649 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


The use of pHluorins for optical measurements of presynaptic activity.
S Sankaranarayanan, D De Angelis, J E Rothman, T A Ryan. Biophys J 2000
379
19

Fiji: an open-source platform for biological-image analysis.
Johannes Schindelin, Ignacio Arganda-Carreras, Erwin Frise, Verena Kaynig, Mark Longair, Tobias Pietzsch, Stephan Preibisch, Curtis Rueden, Stephan Saalfeld, Benjamin Schmid,[...]. Nat Methods 2012
10

pHuji, a pH-sensitive red fluorescent protein for imaging of exo- and endocytosis.
Yi Shen, Morgane Rosendale, Robert E Campbell, David Perrais. J Cell Biol 2014
121
9

Clathrin-mediated endocytosis is the dominant mechanism of vesicle retrieval at hippocampal synapses.
Björn Granseth, Benjamin Odermatt, Stephen J Royle, Leon Lagnado. Neuron 2006
462
7

Molecular aspects of bacterial pH sensing and homeostasis.
Terry A Krulwich, George Sachs, Etana Padan. Nat Rev Microbiol 2011
456
7

Circularly permuted green fluorescent proteins engineered to sense Ca2+.
T Nagai, A Sawano, E S Park, A Miyawaki. Proc Natl Acad Sci U S A 2001
707
7




Measurement of cytosolic, mitochondrial, and Golgi pH in single living cells with green fluorescent proteins.
J Llopis, J M McCaffery, A Miyawaki, M G Farquhar, R Y Tsien. Proc Natl Acad Sci U S A 1998
807
6


Cytosolic pH is a second messenger for glucose and regulates the PKA pathway through V-ATPase.
Reinhard Dechant, Matteo Binda, Sung Sik Lee, Serge Pelet, Joris Winderickx, Matthias Peter. EMBO J 2010
177
6

pHmScarlet is a pH-sensitive red fluorescent protein to monitor exocytosis docking and fusion steps.
Anyuan Liu, Xiaoshuai Huang, Wenting He, Fudong Xue, Yanrui Yang, Jiajia Liu, Liangyi Chen, Lin Yuan, Pingyong Xu. Nat Commun 2021
10
60

An optimized fluorescent probe for visualizing glutamate neurotransmission.
Jonathan S Marvin, Bart G Borghuis, Lin Tian, Joseph Cichon, Mark T Harnett, Jasper Akerboom, Andrew Gordus, Sabine L Renninger, Tsai-Wen Chen, Cornelia I Bargmann,[...]. Nat Methods 2013
504
6

Sensors and regulators of intracellular pH.
Joseph R Casey, Sergio Grinstein, John Orlowski. Nat Rev Mol Cell Biol 2010
5

Live imaging of intra- and extracellular pH in plants using pHusion, a novel genetically encoded biosensor.
Kisten Sisse Krag Gjetting, Cecilie Karkov Ytting, Alexander Schulz, Anja Thoe Fuglsang. J Exp Bot 2012
97
5

Engineering and characterization of a superfolder green fluorescent protein.
Jean-Denis Pédelacq, Stéphanie Cabantous, Timothy Tran, Thomas C Terwilliger, Geoffrey S Waldo. Nat Biotechnol 2006
5

Fluorescent indicators for Ca2+ based on green fluorescent proteins and calmodulin.
A Miyawaki, J Llopis, R Heim, J M McCaffery, J A Adams, M Ikura, R Y Tsien. Nature 1997
5

Enzymatic assembly of DNA molecules up to several hundred kilobases.
Daniel G Gibson, Lei Young, Ray-Yuan Chuang, J Craig Venter, Clyde A Hutchison, Hamilton O Smith. Nat Methods 2009
5

A Genetically Encoded Fluorescent Sensor Enables Rapid and Specific Detection of Dopamine in Flies, Fish, and Mice.
Fangmiao Sun, Jianzhi Zeng, Miao Jing, Jingheng Zhou, Jiesi Feng, Scott F Owen, Yichen Luo, Funing Li, Huan Wang, Takashi Yamaguchi,[...]. Cell 2018
268
5

An expanded palette of genetically encoded Ca²⁺ indicators.
Yongxin Zhao, Satoko Araki, Jiahui Wu, Takayuki Teramoto, Yu-Fen Chang, Masahiro Nakano, Ahmed S Abdelfattah, Manabi Fujiwara, Takeshi Ishihara, Takeharu Nagai,[...]. Science 2011
813
5

Visualization of NMDA receptor-dependent AMPA receptor synaptic plasticity in vivo.
Yong Zhang, Robert H Cudmore, Da-Ting Lin, David J Linden, Richard L Huganir. Nat Neurosci 2015
85
5

The AMPA Receptor Code of Synaptic Plasticity.
Graham H Diering, Richard L Huganir. Neuron 2018
285
5


Circular permutation and receptor insertion within green fluorescent proteins.
G S Baird, D A Zacharias, R Y Tsien. Proc Natl Acad Sci U S A 1999
623
5

pH-Lemon, a Fluorescent Protein-Based pH Reporter for Acidic Compartments.
Sandra Burgstaller, Helmut Bischof, Thomas Gensch, Sarah Stryeck, Benjamin Gottschalk, Jeta Ramadani-Muja, Emrah Eroglu, Rene Rost, Sabine Balfanz, Arnd Baumann,[...]. ACS Sens 2019
50
10

A pH-driven transition of the cytoplasm from a fluid- to a solid-like state promotes entry into dormancy.
Matthias Christoph Munder, Daniel Midtvedt, Titus Franzmann, Elisabeth Nüske, Oliver Otto, Maik Herbig, Elke Ulbricht, Paul Müller, Anna Taubenberger, Shovamayee Maharana,[...]. Elife 2016
191
5

Distinct endocytic pathways control the rate and extent of synaptic vesicle protein recycling.
Susan M Voglmaier, Kaiwen Kam, Hua Yang, Doris L Fortin, Zhaolin Hua, Roger A Nicoll, Robert H Edwards. Neuron 2006
287
5

Green fluorescent protein variants as ratiometric dual emission pH sensors. 1. Structural characterization and preliminary application.
George T Hanson, Tim B McAnaney, Eun Sun Park, Marla E P Rendell, Daniel K Yarbrough, Shaoyou Chu, Lixuan Xi, Steven G Boxer, Marshall H Montrose, S James Remington. Biochemistry 2002
179
4

Expanded dynamic range of fluorescent indicators for Ca(2+) by circularly permuted yellow fluorescent proteins.
Takeharu Nagai, Shuichi Yamada, Takashi Tominaga, Michinori Ichikawa, Atsushi Miyawaki. Proc Natl Acad Sci U S A 2004
759
4

Intracellular pH is a tightly controlled signal in yeast.
Rick Orij, Stanley Brul, Gertien J Smits. Biochim Biophys Acta 2011
122
4

A circuit for navigation in Caenorhabditis elegans.
Jesse M Gray, Joseph J Hill, Cornelia I Bargmann. Proc Natl Acad Sci U S A 2005
457
4

Ultrafast neuronal imaging of dopamine dynamics with designed genetically encoded sensors.
Tommaso Patriarchi, Jounhong Ryan Cho, Katharina Merten, Mark W Howe, Aaron Marley, Wei-Hong Xiong, Robert W Folk, Gerard Joey Broussard, Ruqiang Liang, Min Jee Jang,[...]. Science 2018
348
4

Ultrasensitive fluorescent proteins for imaging neuronal activity.
Tsai-Wen Chen, Trevor J Wardill, Yi Sun, Stefan R Pulver, Sabine L Renninger, Amy Baohan, Eric R Schreiter, Rex A Kerr, Michael B Orger, Vivek Jayaraman,[...]. Nature 2013
4

A Genetically Encoded Fluorescent Sensor for Rapid and Specific In Vivo Detection of Norepinephrine.
Jiesi Feng, Changmei Zhang, Julieta E Lischinsky, Miao Jing, Jingheng Zhou, Huan Wang, Yajun Zhang, Ao Dong, Zhaofa Wu, Hao Wu,[...]. Neuron 2019
143
4


Genetically encoded calcium indicators for multi-color neural activity imaging and combination with optogenetics.
Jasper Akerboom, Nicole Carreras Calderón, Lin Tian, Sebastian Wabnig, Matthias Prigge, Johan Tolö, Andrew Gordus, Michael B Orger, Kristen E Severi, John J Macklin,[...]. Front Mol Neurosci 2013
420
4

Synaptic Vesicle Recycling Pathway Determines Neurotransmitter Content and Release Properties.
Kätlin Silm, Jing Yang, Pamela F Marcott, Cedric S Asensio, Jacob Eriksen, Daryl A Guthrie, Amy H Newman, Christopher P Ford, Robert H Edwards. Neuron 2019
39
10

AMPARs and synaptic plasticity: the last 25 years.
Richard L Huganir, Roger A Nicoll. Neuron 2013
589
4

Genetically encoded indicators of neuronal activity.
Michael Z Lin, Mark J Schnitzer. Nat Neurosci 2016
312
4

Cortical Synaptic AMPA Receptor Plasticity during Motor Learning.
Richard H Roth, Robert H Cudmore, Han L Tan, Ingie Hong, Yong Zhang, Richard L Huganir. Neuron 2020
41
9


Glutamate receptor exocytosis and spine enlargement during chemically induced long-term potentiation.
Charles D Kopec, Bo Li, Wei Wei, Jannic Boehm, Roberto Malinow. J Neurosci 2006
340
4

A trans-synaptic nanocolumn aligns neurotransmitter release to receptors.
Ai-Hui Tang, Haiwen Chen, Tuo P Li, Sarah R Metzbower, Harold D MacGillavry, Thomas A Blanpied. Nature 2016
295
4

A bright monomeric green fluorescent protein derived from Branchiostoma lanceolatum.
Nathan C Shaner, Gerard G Lambert, Andrew Chammas, Yuhui Ni, Paula J Cranfill, Michelle A Baird, Brittney R Sell, John R Allen, Richard N Day, Maria Israelsson,[...]. Nat Methods 2013
579
4

Semisynthetic fluorescent pH sensors for imaging exocytosis and endocytosis.
Magalie Martineau, Agila Somasundaram, Jonathan B Grimm, Todd D Gruber, Daniel Choquet, Justin W Taraska, Luke D Lavis, David Perrais. Nat Commun 2017
42
9

Visualization of Membrane Pore in Live Cells Reveals a Dynamic-Pore Theory Governing Fusion and Endocytosis.
Wonchul Shin, Lihao Ge, Gianvito Arpino, Seth A Villarreal, Edaeni Hamid, Huisheng Liu, Wei-Dong Zhao, Peter J Wen, Hsueh-Cheng Chiang, Ling-Gang Wu. Cell 2018
98
4

Fluorescent false neurotransmitters visualize dopamine release from individual presynaptic terminals.
Niko G Gubernator, Hui Zhang, Roland G W Staal, Eugene V Mosharov, Daniela B Pereira, Minerva Yue, Vojtech Balsanek, Paul A Vadola, Bipasha Mukherjee, Robert H Edwards,[...]. Science 2009
137
4

Coordinated regulation of intracellular pH by two glucose-sensing pathways in yeast.
Daniel G Isom, Stephani C Page, Leonard B Collins, Nicholas J Kapolka, Geoffrey J Taghon, Henrik G Dohlman. J Biol Chem 2018
15
26

Monitoring of vacuolar-type H+ ATPase-mediated proton influx into synaptic vesicles.
Yoshihiro Egashira, Miki Takase, Shigeo Takamori. J Neurosci 2015
38
10


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.