A citation-based method for searching scientific literature

Yujia A Chan, Maria J Aristizabal, Phoebe Y T Lu, Zongli Luo, Akil Hamza, Michael S Kobor, Peter C Stirling, Philip Hieter. PLoS Genet 2014
Times Cited: 153







List of shared articles



Times cited

SF3B1 homeostasis is critical for survival and therapeutic response in T cell leukemia.
Cuijuan Han, Alireza Khodadadi-Jamayran, Adam H Lorch, Qi Jin, Valentina Serafin, Ping Zhu, Yuliya Politanska, Limin Sun, Blanca T Gutierrez-Diaz, Marina V Pryzhkova,[...]. Sci Adv 2022
3

Integrative analysis and prediction of human R-loop binding proteins.
Arun Kumar, Louis-Alexandre Fournier, Peter C Stirling. G3 (Bethesda) 2022
0

Resolution of R-loops by topoisomerase III-β (TOP3B) in coordination with the DEAD-box helicase DDX5.
Sourav Saha, Xi Yang, Shar-Yin Naomi Huang, Keli Agama, Simone Andrea Baechler, Yilun Sun, Hongliang Zhang, Liton Kumar Saha, Shuaikun Su, Lisa M Jenkins,[...]. Cell Rep 2022
0

Untangling the crosstalk between BRCA1 and R-loops during DNA repair.
Marta San Martin Alonso, Sylvie M Noordermeer. Nucleic Acids Res 2021
5

Linking circular intronic RNA degradation and function in transcription by RNase H1.
Xiang Li, Jia-Lin Zhang, Yun-Ni Lei, Xiao-Qi Liu, Wei Xue, Yang Zhang, Fan Nan, Xiang Gao, Jun Zhang, Jia Wei,[...]. Sci China Life Sci 2021
11

R-loop and its functions at the regulatory interfaces between transcription and (epi)genome.
Arum Kim, Gang Greg Wang. Biochim Biophys Acta Gene Regul Mech 2021
2



Regulatory R-loops as facilitators of gene expression and genome stability.
Christof Niehrs, Brian Luke. Nat Rev Mol Cell Biol 2020
122

The dark side of RNA:DNA hybrids.
Alessandra Brambati, Luca Zardoni, Eleonora Nardini, Achille Pellicioli, Giordano Liberi. Mutat Res Rev Mutat Res 2020
19

UAP56/DDX39B is a major cotranscriptional RNA-DNA helicase that unwinds harmful R loops genome-wide.
Carmen Pérez-Calero, Aleix Bayona-Feliu, Xiaoyu Xue, Sonia I Barroso, Sergio Muñoz, Víctor M González-Basallote, Patrick Sung, Andrés Aguilera. Genes Dev 2020
37

New insight into the biology of R-loops.
Prasun Chakraborty. Mutat Res 2020
5

Harmful DNA:RNA hybrids are formed in cis and in a Rad51-independent manner.
Juan Lafuente-Barquero, Maria Luisa García-Rubio, Marta San Martin-Alonso, Belén Gómez-González, Andrés Aguilera. Elife 2020
13

Selective defects in gene expression control genome instability in yeast splicing mutants.
Annie S Tam, Tianna S Sihota, Karissa L Milbury, Anni Zhang, Veena Mathew, Peter C Stirling. Mol Biol Cell 2019
14


What causes an RNA-DNA hybrid to compromise genome integrity?
Ana G Rondón, Andrés Aguilera. DNA Repair (Amst) 2019
11

Depletion of the MFAP1/SPP381 Splicing Factor Causes R-Loop-Independent Genome Instability.
Irene Salas-Armenteros, Sonia I Barroso, Ana G Rondón, Mónica Pérez, Eloisa Andújar, Rosa Luna, Andrés Aguilera. Cell Rep 2019
12

MRE11-RAD50-NBS1 promotes Fanconi Anemia R-loop suppression at transcription-replication conflicts.
Emily Yun-Chia Chang, Shuhe Tsai, Maria J Aristizabal, James P Wells, Yan Coulombe, Franciele F Busatto, Yujia A Chan, Arun Kumar, Yi Dan Zhu, Alan Ying-Hsu Wang,[...]. Nat Commun 2019
30

R Loops: From Physiological to Pathological Roles.
Tatiana García-Muse, Andrés Aguilera. Cell 2019
189

The THO Complex as a Paradigm for the Prevention of Cotranscriptional R-Loops.
Rosa Luna, Ana G Rondón, Carmen Pérez-Calero, Irene Salas-Armenteros, Andrés Aguilera. Cold Spring Harb Symp Quant Biol 2019
14


Topoisomerase I and Genome Stability: The Good and the Bad.
Jang-Eun Cho, Sue Jinks-Robertson. Methods Mol Biol 2018
11

Genome-wide relationship between R-loop formation and antisense transcription in Escherichia coli.
Nalini Raghunathan, Rajvardhan M Kapshikar, Jakku K Leela, Jillella Mallikarjun, Philippe Bouloc, Jayaraman Gowrishankar. Nucleic Acids Res 2018
19



Human proteins that interact with RNA/DNA hybrids.
Isabel X Wang, Christopher Grunseich, Jennifer Fox, Joshua Burdick, Zhengwei Zhu, Niema Ravazian, Markus Hafner, Vivian G Cheung. Genome Res 2018
67

Genome-wide mapping reveals conserved and diverged R-loop activities in the unusual genetic landscape of the African trypanosome genome.
Emma Briggs, Graham Hamilton, Kathryn Crouch, Craig Lapsley, Richard McCulloch. Nucleic Acids Res 2018
15


R Loops and Links to Human Disease.
Patricia Richard, James L Manley. J Mol Biol 2017
92

Functions of Replication Protein A as a Sensor of R Loops and a Regulator of RNaseH1.
Hai Dang Nguyen, Tribhuwan Yadav, Sumanprava Giri, Borja Saez, Timothy A Graubert, Lee Zou. Mol Cell 2017
132

RNA-DNA hybrid (R-loop) immunoprecipitation mapping: an analytical workflow to evaluate inherent biases.
László Halász, Zsolt Karányi, Beáta Boros-Oláh, Tímea Kuik-Rózsa, Éva Sipos, Éva Nagy, Ágnes Mosolygó-L, Anett Mázló, Éva Rajnavölgyi, Gábor Halmos,[...]. Genome Res 2017
48

PIF1 family DNA helicases suppress R-loop mediated genome instability at tRNA genes.
Phong Lan Thao Tran, Thomas J Pohl, Chi-Fu Chen, Angela Chan, Sebastian Pott, Virginia A Zakian. Nat Commun 2017
68