A citation-based method for searching scientific literature

Evan Z Macosko, Anindita Basu, Rahul Satija, James Nemesh, Karthik Shekhar, Melissa Goldman, Itay Tirosh, Allison R Bialas, Nolan Kamitaki, Emily M Martersteck, John J Trombetta, David A Weitz, Joshua R Sanes, Alex K Shalek, Aviv Regev, Steven A McCarroll. Cell 2015
Times Cited: 2458



Allon M Klein, Linas Mazutis, Ilke Akartuna, Naren Tallapragada, Adrian Veres, Victor Li, Leonid Peshkin, David A Weitz, Marc W Kirschner. Cell 2015
Times Cited: 1258




List of shared articles



Times cited

PsychENCODE and beyond: transcriptomics and epigenomics of brain development and organoids.
Alexandre Jourdon, Soraya Scuderi, Davide Capauto, Alexej Abyzov, Flora M Vaccarino. Neuropsychopharmacology 2021
1



Idiopathic pulmonary fibrosis: Disease mechanisms and drug development.
Paolo Spagnolo, Jonathan A Kropski, Mark G Jones, Joyce S Lee, Giulio Rossi, Theodoros Karampitsakos, Toby M Maher, Argyrios Tzouvelekis, Christopher J Ryerson. Pharmacol Ther 2021
2

Multi-domain translation between single-cell imaging and sequencing data using autoencoders.
Karren Dai Yang, Anastasiya Belyaeva, Saradha Venkatachalapathy, Karthik Damodaran, Abigail Katcoff, Adityanarayanan Radhakrishnan, G V Shivashankar, Caroline Uhler. Nat Commun 2021
6

Single-Cell RNA Sequencing to Disentangle the Blood System.
Jean Acosta, Daniel Ssozi, Peter van Galen. Arterioscler Thromb Vasc Biol 2021
0

Delineating copy number and clonal substructure in human tumors from single-cell transcriptomes.
Ruli Gao, Shanshan Bai, Ying C Henderson, Yiyun Lin, Aislyn Schalck, Yun Yan, Tapsi Kumar, Min Hu, Emi Sei, Alexander Davis,[...]. Nat Biotechnol 2021
4

Single-cell resolution landscape of equine peripheral blood mononuclear cells reveals diverse cell types including T-bet+ B cells.
Roosheel S Patel, Joy E Tomlinson, Thomas J Divers, Gerlinde R Van de Walle, Brad R Rosenberg. BMC Biol 2021
2

Elucidating the cellular dynamics of the brain with single-cell RNA sequencing.
Aida Cardona-Alberich, Manon Tourbez, Sarah F Pearce, Christopher R Sibley. RNA Biol 2021
2

Single-cell transcriptomic reveals molecular diversity and developmental heterogeneity of human stem cell-derived oligodendrocyte lineage cells.
Xitiz Chamling, Alyssa Kallman, Weixiang Fang, Cynthia A Berlinicke, Joseph L Mertz, Prajwal Devkota, Itzy E Morales Pantoja, Matthew D Smith, Zhicheng Ji, Calvin Chang,[...]. Nat Commun 2021
2

Joint profiling of histone modifications and transcriptome in single cells from mouse brain.
Chenxu Zhu, Yanxiao Zhang, Yang Eric Li, Jacinta Lucero, M Margarita Behrens, Bing Ren. Nat Methods 2021
4

Imaging-based screens of pool-synthesized cell libraries.
Michael Lawson, Johan Elf. Nat Methods 2021
0

The current landscape of single-cell transcriptomics for cancer immunotherapy.
Puneeth Guruprasad, Yong Gu Lee, Ki Hyun Kim, Marco Ruella. J Exp Med 2021
3

Single-Cell Sequencing Applications in the Inner Ear.
Mingxuan Wu, Mingyu Xia, Wenyan Li, Huawei Li. Front Cell Dev Biol 2021
0

Sequencing-Based Protein Analysis of Single Extracellular Vesicles.
Jina Ko, Yongcheng Wang, Kuanwei Sheng, David A Weitz, Ralph Weissleder. ACS Nano 2021
0

Single-Cell RNA Sequencing Analysis: A Step-by-Step Overview.
Shaked Slovin, Annamaria Carissimo, Francesco Panariello, Antonio Grimaldi, Valentina Bouché, Gennaro Gambardella, Davide Cacchiarelli. Methods Mol Biol 2021
0

Comprehensive description of the current breast cancer microenvironment advancements via single-cell analysis.
Xueqi Yan, Yinghong Xie, Fan Yang, Yijia Hua, Tianyu Zeng, Chunxiao Sun, Mengzhu Yang, Xiang Huang, Hao Wu, Ziyi Fu,[...]. J Exp Clin Cancer Res 2021
0

Calculating Sample Size Requirements for Temporal Dynamics in Single-Cell Proteomics.
Hannah Boekweg, Amanda J Guise, Edward D Plowey, Ryan T Kelly, Samuel H Payne. Mol Cell Proteomics 2021
0

Single-Cell RNA Sequencing in Parkinson's Disease.
Shi-Xun Ma, Su Bin Lim. Biomedicines 2021
0

Comparison of high-throughput single-cell RNA sequencing data processing pipelines.
Mingxuan Gao, Mingyi Ling, Xinwei Tang, Shun Wang, Xu Xiao, Ying Qiao, Wenxian Yang, Rongshan Yu. Brief Bioinform 2021
0

A microfluidic device enabling deterministic single cell trapping and release.
Huichao Chai, Yongxiang Feng, Fei Liang, Wenhui Wang. Lab Chip 2021
0

Ultra-high-throughput single-cell RNA sequencing and perturbation screening with combinatorial fluidic indexing.
Paul Datlinger, André F Rendeiro, Thorina Boenke, Martin Senekowitsch, Thomas Krausgruber, Daniele Barreca, Christoph Bock. Nat Methods 2021
1

The Known Unknowns of the Immune Response to Coccidioides.
Rebecca A Ward, George R Thompson, Alexandra-Chloé Villani, Bo Li, Michael K Mansour, Marcel Wuethrich, Jenny M Tam, Bruce S Klein, Jatin M Vyas. J Fungi (Basel) 2021
0

Analysis of single-cell RNA sequencing data based on autoencoders.
Andrea Tangherloni, Federico Ricciuti, Daniela Besozzi, Pietro Liò, Ana Cvejic. BMC Bioinformatics 2021
0

Single-cell approaches to investigate B cells and antibodies in autoimmune neurological disorders.
Alicia Zou, Sudarshini Ramanathan, Russell C Dale, Fabienne Brilot. Cell Mol Immunol 2021
1

Model-based autoencoders for imputing discrete single-cell RNA-seq data.
Tian Tian, Martin Renqiang Min, Zhi Wei. Methods 2021
1

Genome editing of immune cells using CRISPR/Cas9.
Segi Kim, Cedric Hupperetz, Seongjoon Lim, Chan Hyuk Kim. BMB Rep 2021
0

Single-cell RNA sequencing in vision research: Insights into human retinal health and disease.
Andrew P Voigt, Nathaniel K Mullin, Edwin M Stone, Budd A Tucker, Todd E Scheetz, Robert F Mullins. Prog Retin Eye Res 2021
1

Gut-licensed IFNγ+ NK cells drive LAMP1+TRAIL+ anti-inflammatory astrocytes.
Liliana M Sanmarco, Michael A Wheeler, Cristina Gutiérrez-Vázquez, Carolina Manganeli Polonio, Mathias Linnerbauer, Felipe A Pinho-Ribeiro, Zhaorong Li, Federico Giovannoni, Katelyn V Batterman, Giulia Scalisi,[...]. Nature 2021
14

Accurate feature selection improves single-cell RNA-seq cell clustering.
Kenong Su, Tianwei Yu, Hao Wu. Brief Bioinform 2021
0

Single-cell RNA sequencing reveals developmental heterogeneity among Plasmodium berghei sporozoites.
Anthony A Ruberto, Caitlin Bourke, Nicolas Merienne, Thomas Obadia, Rogerio Amino, Ivo Mueller. Sci Rep 2021
0