A citation-based method for searching scientific literature

Frédéric Chédin. Trends Genet 2016
Times Cited: 110



Stephan Hamperl, Michael J Bocek, Joshua C Saldivar, Tomek Swigut, Karlene A Cimprich. Cell 2017
Times Cited: 254




List of shared articles



Times cited

Epigenetic reprogramming by TET enzymes impacts co-transcriptional R-loops.
João C Sabino, Madalena R de Almeida, Patrícia L Abreu, Ana M Ferreira, Paulo Caldas, Marco M Domingues, Nuno C Santos, Claus M Azzalin, Ana Rita Grosso, Sérgio Fernandes de Almeida. Elife 2022
2

R-loop Mapping and Characterization During Drosophila Embryogenesis Reveals Developmental Plasticity in R-loop Signatures.
Alexander Munden, Mary Lauren Benton, John A Capra, Jared T Nordman. J Mol Biol 2022
0

ZFP281-BRCA2 prevents R-loop accumulation during DNA replication.
Yan Wang, Binbin Ma, Xiaoxu Liu, Ge Gao, Zhuanzhuan Che, Menghan Fan, Siyan Meng, Xiru Zhao, Rio Sugimura, Hua Cao,[...]. Nat Commun 2022
0

Recognition of RNA by the S9.6 antibody creates pervasive artifacts when imaging RNA:DNA hybrids.
John A Smolka, Lionel A Sanz, Stella R Hartono, Frédéric Chédin. J Cell Biol 2021
20

Defining R-loop classes and their contributions to genome instability.
Daisy Castillo-Guzman, Frédéric Chédin. DNA Repair (Amst) 2021
7

Toxic R-loops: Cause or consequence of replication stress?
Samira Kemiha, Jérôme Poli, Yea-Lih Lin, Armelle Lengronne, Philippe Pasero. DNA Repair (Amst) 2021
1

Transcription-Replication Collisions-A Series of Unfortunate Events.
Commodore St Germain, Hongchang Zhao, Jacqueline H Barlow. Biomolecules 2021
0

R-Loops and Its Chro-Mates: The Strange Case of Dr. Jekyll and Mr. Hyde.
Sidrit Uruci, Calvin Shun Yu Lo, David Wheeler, Nitika Taneja. Int J Mol Sci 2021
1

Functions of the CSB Protein at Topoisomerase 2 Inhibitors-Induced DNA Lesions.
Franciele Faccio Busatto, Sofiane Y Mersaoui, Yilun Sun, Yves Pommier, Jean-Yves Masson, Jenifer Saffi. Front Cell Dev Biol 2021
0

Elongating RNA polymerase II and RNA:DNA hybrids hinder fork progression and gene expression at sites of head-on replication-transcription collisions.
Luca Zardoni, Eleonora Nardini, Alessandra Brambati, Chiara Lucca, Ramveer Choudhary, Federica Loperfido, Simone Sabbioneda, Giordano Liberi. Nucleic Acids Res 2021
5

N6-methyladenosine regulates the stability of RNA:DNA hybrids in human cells.
Abdulkadir Abakir, Tom C Giles, Agnese Cristini, Jeremy M Foster, Nan Dai, Marta Starczak, Alejandro Rubio-Roldan, Miaomiao Li, Maria Eleftheriou, James Crutchley,[...]. Nat Genet 2020
81

From R-Loops to G-Quadruplexes: Emerging New Threats for the Replication Fork.
Antonio Maffia, Cecilia Ranise, Simone Sabbioneda. Int J Mol Sci 2020
17

The dark side of RNA:DNA hybrids.
Alessandra Brambati, Luca Zardoni, Eleonora Nardini, Achille Pellicioli, Giordano Liberi. Mutat Res Rev Mutat Res 2020
19

qDRIP: a method to quantitatively assess RNA-DNA hybrid formation genome-wide.
Magdalena P Crossley, Michael J Bocek, Stephan Hamperl, Tomek Swigut, Karlene A Cimprich. Nucleic Acids Res 2020
20

RNA: a double-edged sword in genome maintenance.
Dali Zong, Philipp Oberdoerffer, Pedro J Batista, André Nussenzweig. Nat Rev Genet 2020
16

Topoisomerase 1 prevents replication stress at R-loop-enriched transcription termination sites.
Alexy Promonet, Ismaël Padioleau, Yaqun Liu, Lionel Sanz, Anna Biernacka, Anne-Lyne Schmitz, Magdalena Skrzypczak, Amélie Sarrazin, Clément Mettling, Maga Rowicka,[...]. Nat Commun 2020
42

R-Loops as Cellular Regulators and Genomic Threats.
Madzia P Crossley, Michael Bocek, Karlene A Cimprich. Mol Cell 2019
259

Biology of RNA Surveillance in Development and Disease.
Brice Laffleur, Uttiya Basu. Trends Cell Biol 2019
9

R-ChIP for genome-wide mapping of R-loops by using catalytically inactive RNASEH1.
Jia-Yu Chen, Xuan Zhang, Xiang-Dong Fu, Liang Chen. Nat Protoc 2019
25

ALBA protein complex reads genic R-loops to maintain genome stability in Arabidopsis.
Wei Yuan, Jincong Zhou, Jinjin Tong, Wanqing Zhuo, Lishuan Wang, Yan Li, Qianwen Sun, Weiqiang Qian. Sci Adv 2019
21

Arginine methylation of the DDX5 helicase RGG/RG motif by PRMT5 regulates resolution of RNA:DNA hybrids.
Sofiane Y Mersaoui, Zhenbao Yu, Yan Coulombe, Martin Karam, Franciele F Busatto, Jean-Yves Masson, Stéphane Richard. EMBO J 2019
64

The DNA damage response acts as a safeguard against harmful DNA-RNA hybrids of different origins.
Sonia Barroso, Emilia Herrera-Moyano, Sergio Muñoz, María García-Rubio, Belén Gómez-González, Andrés Aguilera. EMBO Rep 2019
40

DROPA: DRIP-seq optimized peak annotator.
Marco Russo, Bruno De Lucca, Tiziano Flati, Silvia Gioiosa, Giovanni Chillemi, Giovanni Capranico. BMC Bioinformatics 2019
4

m6A promotes R-loop formation to facilitate transcription termination.
Xin Yang, Qian-Lan Liu, Wei Xu, Yi-Chang Zhang, Ying Yang, Lin-Fang Ju, Jing Chen, Yu-Sheng Chen, Kuan Li, Jie Ren,[...]. Cell Res 2019
53

Spliceosomal components protect embryonic neurons from R-loop-mediated DNA damage and apoptosis.
Shelly Sorrells, Sara Nik, Mattie J Casey, Rosannah C Cameron, Harold Truong, Cristhian Toruno, Michelle Gulfo, Albert Lowe, Cicely Jette, Rodney A Stewart,[...]. Dis Model Mech 2018
18


Mechanisms of Oncogene-Induced Replication Stress: Jigsaw Falling into Place.
Panagiotis Kotsantis, Eva Petermann, Simon J Boulton. Cancer Discov 2018
153


R-loop generation during transcription: Formation, processing and cellular outcomes.
Boris P Belotserkovskii, Silvia Tornaletti, Alicia D D'Souza, Philip C Hanawalt. DNA Repair (Amst) 2018
55

Genome-wide mapping reveals conserved and diverged R-loop activities in the unusual genetic landscape of the African trypanosome genome.
Emma Briggs, Graham Hamilton, Kathryn Crouch, Craig Lapsley, Richard McCulloch. Nucleic Acids Res 2018
15

Ribonuclease H1-targeted R-loops in surface antigen gene expression sites can direct trypanosome immune evasion.
Emma Briggs, Kathryn Crouch, Leandro Lemgruber, Craig Lapsley, Richard McCulloch. PLoS Genet 2018
26