A citation-based method for searching scientific literature

Xiaowen Zhang, Huai-Chin Chiang, Yao Wang, Chi Zhang, Sabrina Smith, Xiayan Zhao, Sreejith J Nair, Joel Michalek, Ismail Jatoi, Meeghan Lautner, Boyce Oliver, Howard Wang, Anna Petit, Teresa Soler, Joan Brunet, Francesca Mateo, Miguel Angel Pujana, Elizabeth Poggi, Krysta Chaldekas, Claudine Isaacs, Beth N Peshkin, Oscar Ochoa, Frederic Chedin, Constantine Theoharis, Lu-Zhe Sun, Tyler J Curiel, Richard Elledge, Victor X Jin, Yanfen Hu, Rong Li. Nat Commun 2017
Times Cited: 76



Madzia P Crossley, Michael Bocek, Karlene A Cimprich. Mol Cell 2019
Times Cited: 244




List of shared articles



Times cited

Mechanisms of damage tolerance and repair during DNA replication.
Mohamed Elsaid Ashour, Nima Mosammaparast. Nucleic Acids Res 2021
5

Proximity labeling identifies a repertoire of site-specific R-loop modulators.
Qingqing Yan, Phillip Wulfridge, John Doherty, Jose L Fernandez-Luna, Pedro J Real, Hsin-Yao Tang, Kavitha Sarma. Nat Commun 2022
3

New Roles for Canonical Transcription Factors in Repeat Expansion Diseases.
Lindsey D Goodman, Nancy M Bonini. Trends Genet 2020
8

Aicardi-Goutières syndrome-associated gene SAMHD1 preserves genome integrity by preventing R-loop formation at transcription-replication conflict regions.
Kiwon Park, Jeongmin Ryoo, Heena Jeong, Minsu Kim, Sungwon Lee, Sung-Yeon Hwang, Jiyoung Ahn, Doyeon Kim, Hyungseok C Moon, Daehyun Baek,[...]. PLoS Genet 2021
6

RNA: a double-edged sword in genome maintenance.
Dali Zong, Philipp Oberdoerffer, Pedro J Batista, André Nussenzweig. Nat Rev Genet 2020
15

Transcription-associated topoisomerase 2α (TOP2A) activity is a major effector of cytotoxicity induced by G-quadruplex ligands.
Madeleine Bossaert, Angélique Pipier, Jean-Francois Riou, Céline Noirot, Linh-Trang Nguyên, Remy-Felix Serre, Olivier Bouchez, Eric Defrancq, Patrick Calsou, Sébastien Britton,[...]. Elife 2021
14

Lessons learned from understanding chemotherapy resistance in epithelial tubo-ovarian carcinoma from BRCA1and BRCA2mutation carriers.
Cécile Le Page, Setor Amuzu, Kurosh Rahimi, Walter Gotlieb, Jiannis Ragoussis, Patricia N Tonin. Semin Cancer Biol 2021
7

ATAD5 restricts R-loop formation through PCNA unloading and RNA helicase maintenance at the replication fork.
Sangin Kim, Nalae Kang, Su Hyung Park, James Wells, Taejoo Hwang, Eunjin Ryu, Byung-Gyu Kim, Sunyoung Hwang, Seong-Jung Kim, Sukhyun Kang,[...]. Nucleic Acids Res 2020
16

Walking a tightrope: The complex balancing act of R-loops in genome stability.
Joshua R Brickner, Jada L Garzon, Karlene A Cimprich. Mol Cell 2022
0

R-Loop Physiology and Pathology: A Brief Review.
Ryan Patrick Mackay, Qinqin Xu, Paul M Weinberger. DNA Cell Biol 2020
5

Catalytically inactive, purified RNase H1: A specific and sensitive probe for RNA-DNA hybrid imaging.
Magdalena P Crossley, Joshua R Brickner, Chenlin Song, Su Mon Thin Zar, Su S Maw, Frédéric Chédin, Miaw-Sheue Tsai, Karlene A Cimprich. J Cell Biol 2021
8

Defining R-loop classes and their contributions to genome instability.
Daisy Castillo-Guzman, Frédéric Chédin. DNA Repair (Amst) 2021
5

Sources, resolution and physiological relevance of R-loops and RNA-DNA hybrids.
Eva Petermann, Li Lan, Lee Zou. Nat Rev Mol Cell Biol 2022
0

The dark side of RNA:DNA hybrids.
Alessandra Brambati, Luca Zardoni, Eleonora Nardini, Achille Pellicioli, Giordano Liberi. Mutat Res Rev Mutat Res 2020
18

Elongating RNA polymerase II and RNA:DNA hybrids hinder fork progression and gene expression at sites of head-on replication-transcription collisions.
Luca Zardoni, Eleonora Nardini, Alessandra Brambati, Chiara Lucca, Ramveer Choudhary, Federica Loperfido, Simone Sabbioneda, Giordano Liberi. Nucleic Acids Res 2021
3

R-loop and its functions at the regulatory interfaces between transcription and (epi)genome.
Arum Kim, Gang Greg Wang. Biochim Biophys Acta Gene Regul Mech 2021
2

R-loopBase: a knowledgebase for genome-wide R-loop formation and regulation.
Ruoyao Lin, Xiaoming Zhong, Yongli Zhou, Huichao Geng, Qingxi Hu, Zhihao Huang, Jun Hu, Xiang-Dong Fu, Liang Chen, Jia-Yu Chen. Nucleic Acids Res 2022
1

Systematic bromodomain protein screens identify homologous recombination and R-loop suppression pathways involved in genome integrity.
Jae Jin Kim, Seo Yun Lee, Fade Gong, Anna M Battenhouse, Daniel R Boutz, Aarti Bashyal, Samantha T Refvik, Cheng-Ming Chiang, Blerta Xhemalce, Tanya T Paull,[...]. Genes Dev 2019
45

R-loops as Janus-faced modulators of DNA repair.
Aline Marnef, Gaëlle Legube. Nat Cell Biol 2021
32

Sensing R-Loop-Associated DNA Damage to Safeguard Genome Stability.
Carlo Rinaldi, Paolo Pizzul, Maria Pia Longhese, Diego Bonetti. Front Cell Dev Biol 2021
11

From R-Loops to G-Quadruplexes: Emerging New Threats for the Replication Fork.
Antonio Maffia, Cecilia Ranise, Simone Sabbioneda. Int J Mol Sci 2020
17

DNA repair defects in cancer and therapeutic opportunities.
Jessica L Hopkins, Li Lan, Lee Zou. Genes Dev 2022
0

qDRIP: a method to quantitatively assess RNA-DNA hybrid formation genome-wide.
Magdalena P Crossley, Michael J Bocek, Stephan Hamperl, Tomek Swigut, Karlene A Cimprich. Nucleic Acids Res 2020
16


RNA-DNA hybrids and the convergence with DNA repair.
Tanya T Paull. Crit Rev Biochem Mol Biol 2019
11