A citation-based method for searching scientific literature

Vladimir Yu Kiselev, Andrew Yiu, Martin Hemberg. Nat Methods 2018
Times Cited: 179



Allon M Klein, Linas Mazutis, Ilke Akartuna, Naren Tallapragada, Adrian Veres, Victor Li, Leonid Peshkin, David A Weitz, Marc W Kirschner. Cell 2015
Times Cited: 1367




List of shared articles



Times cited


Probabilistic harmonization and annotation of single-cell transcriptomics data with deep generative models.
Chenling Xu, Romain Lopez, Edouard Mehlman, Jeffrey Regier, Michael I Jordan, Nir Yosef. Mol Syst Biol 2021
10

Accurate feature selection improves single-cell RNA-seq cell clustering.
Kenong Su, Tianwei Yu, Hao Wu. Brief Bioinform 2021
1

Single-Cell RNA Sequencing in Parkinson's Disease.
Shi-Xun Ma, Su Bin Lim. Biomedicines 2021
1

Tutorial: guidelines for annotating single-cell transcriptomic maps using automated and manual methods.
Zoe A Clarke, Tallulah S Andrews, Jawairia Atif, Delaram Pouyabahar, Brendan T Innes, Sonya A MacParland, Gary D Bader. Nat Protoc 2021
0

scDeepSort: a pre-trained cell-type annotation method for single-cell transcriptomics using deep learning with a weighted graph neural network.
Xin Shao, Haihong Yang, Xiang Zhuang, Jie Liao, Penghui Yang, Junyun Cheng, Xiaoyan Lu, Huajun Chen, Xiaohui Fan. Nucleic Acids Res 2021
0

Leveraging the Cell Ontology to classify unseen cell types.
Sheng Wang, Angela Oliveira Pisco, Aaron McGeever, Maria Brbic, Marinka Zitnik, Spyros Darmanis, Jure Leskovec, Jim Karkanias, Russ B Altman. Nat Commun 2021
0

bayNorm: Bayesian gene expression recovery, imputation and normalization for single-cell RNA-sequencing data.
Wenhao Tang, François Bertaux, Philipp Thomas, Claire Stefanelli, Malika Saint, Samuel Marguerat, Vahid Shahrezaei. Bioinformatics 2020
14

Evaluation of single-cell classifiers for single-cell RNA sequencing data sets.
Xinlei Zhao, Shuang Wu, Nan Fang, Xiao Sun, Jue Fan. Brief Bioinform 2020
13


Benchmarking principal component analysis for large-scale single-cell RNA-sequencing.
Koki Tsuyuzaki, Hiroyuki Sato, Kenta Sato, Itoshi Nikaido. Genome Biol 2020
11

Eleven grand challenges in single-cell data science.
David Lähnemann, Johannes Köster, Ewa Szczurek, Davis J McCarthy, Stephanie C Hicks, Mark D Robinson, Catalina A Vallejos, Kieran R Campbell, Niko Beerenwinkel, Ahmed Mahfouz,[...]. Genome Biol 2020
142


Advances and challenges in epigenomic single-cell sequencing applications.
Martin Philpott, Adam P Cribbs, Tom Brown, Tom Brown, Udo Oppermann. Curr Opin Chem Biol 2020
8

Single Cell RNA Sequencing in Atherosclerosis Research.
Jesse W Williams, Holger Winkels, Christopher P Durant, Konstantin Zaitsev, Yanal Ghosheh, Klaus Ley. Circ Res 2020
24

New avenues for systematically inferring cell-cell communication: through single-cell transcriptomics data.
Xin Shao, Xiaoyan Lu, Jie Liao, Huajun Chen, Xiaohui Fan. Protein Cell 2020
12

Single-cell technologies in hepatology: new insights into liver biology and disease pathogenesis.
Prakash Ramachandran, Kylie P Matchett, Ross Dobie, John R Wilson-Kanamori, Neil C Henderson. Nat Rev Gastroenterol Hepatol 2020
24