A citation-based method for searching scientific literature

Byungjin Hwang, Ji Hyun Lee, Duhee Bang. Exp Mol Med 2018
Times Cited: 351



Andrew Butler, Paul Hoffman, Peter Smibert, Efthymia Papalexi, Rahul Satija. Nat Biotechnol 2018
Times Cited: 2430




List of shared articles



Times cited

SCDC: bulk gene expression deconvolution by multiple single-cell RNA sequencing references.
Meichen Dong, Aatish Thennavan, Eugene Urrutia, Yun Li, Charles M Perou, Fei Zou, Yuchao Jiang. Brief Bioinform 2021
16

6

A review of computational strategies for denoising and imputation of single-cell transcriptomic data.
Lucrezia Patruno, Davide Maspero, Francesco Craighero, Fabrizio Angaroni, Marco Antoniotti, Alex Graudenzi. Brief Bioinform 2021
0

Ensemble learning models that predict surface protein abundance from single-cell multimodal omics data.
Fan Xu, Shike Wang, Xinnan Dai, Piyushkumar A Mundra, Jie Zheng. Methods 2021
2

Single nucleus transcriptomics data integration recapitulates the major cell types in human liver.
Klev Diamanti, Juan Salvador Inda Díaz, Amanda Raine, Gang Pan, Claes Wadelius, Marco Cavalli. Hepatol Res 2021
1

Analysis of canine myeloid-derived suppressor cells (MDSCs) utilizing fluorescence-activated cell sorting, RNA protection mediums to yield quality RNA for single-cell RNA sequencing.
K Jackson, R J Milner, A Doty, S Hutchison, G Cortes-Hinojosa, A Riva, B Sahay, A Lejeune, S Bechtel. Vet Immunol Immunopathol 2021
0

Goals and approaches for each processing step for single-cell RNA sequencing data.
Zilong Zhang, Feifei Cui, Chunyu Wang, Lingling Zhao, Quan Zou. Brief Bioinform 2021
2


Single-cell RNA sequencing in vision research: Insights into human retinal health and disease.
Andrew P Voigt, Nathaniel K Mullin, Edwin M Stone, Budd A Tucker, Todd E Scheetz, Robert F Mullins. Prog Retin Eye Res 2021
3


scGNN is a novel graph neural network framework for single-cell RNA-Seq analyses.
Juexin Wang, Anjun Ma, Yuzhou Chang, Jianting Gong, Yuexu Jiang, Ren Qi, Cankun Wang, Hongjun Fu, Qin Ma, Dong Xu. Nat Commun 2021
3

Multiplexed Analysis of Retinal Gene Expression and Chromatin Accessibility using scRNA-Seq and scATAC-Seq.
Kurt Weir, Patrick Leavey, Clayton Santiago, Seth Blackshaw. J Vis Exp 2021
0

Single-Cell RNA Sequencing Analysis: A Step-by-Step Overview.
Shaked Slovin, Annamaria Carissimo, Francesco Panariello, Antonio Grimaldi, Valentina Bouché, Gennaro Gambardella, Davide Cacchiarelli. Methods Mol Biol 2021
0

Applications of single-cell and bulk RNA sequencing in onco-immunology.
Maria Kuksin, Daphné Morel, Marine Aglave, François-Xavier Danlos, Aurélien Marabelle, Andrei Zinovyev, Daniel Gautheret, Loïc Verlingue. Eur J Cancer 2021
1


Single-Cell Transcriptomics: Current Methods and Challenges in Data Acquisition and Analysis.
Asif Adil, Vijay Kumar, Arif Tasleem Jan, Mohammed Asger. Front Neurosci 2021
0

Differential gene expression analysis for multi-subject single cell RNA sequencing studies with aggregateBioVar.
Andrew L Thurman, Jason A Ratcliff, Michael S Chimenti, Alejandro A Pezzulo. Bioinformatics 2021
0

Analysis of deficiency of adenosine deaminase 2 pathogenesis based on single-cell RNA sequencing of monocytes.
Naoki Watanabe, Shouguo Gao, Zhijie Wu, Sai Batchu, Sachiko Kajigaya, Carrie Diamond, Lemlem Alemu, Diego Quinones Raffo, Patrycja Hoffmann, Deborah Stone,[...]. J Leukoc Biol 2021
1

DRscDB: A single-cell RNA-seq resource for data mining and data comparison across species.
Yanhui Hu, Sudhir Gopal Tattikota, Yifang Liu, Aram Comjean, Yue Gao, Corey Forman, Grace Kim, Jonathan Rodiger, Irene Papatheodorou, Gilberto Dos Santos,[...]. Comput Struct Biotechnol J 2021
1

Tutorial: guidelines for annotating single-cell transcriptomic maps using automated and manual methods.
Zoe A Clarke, Tallulah S Andrews, Jawairia Atif, Delaram Pouyabahar, Brendan T Innes, Sonya A MacParland, Gary D Bader. Nat Protoc 2021
0