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List of shared articles
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Experimental and computational technologies to dissect the kidney at the single-cell level.
Christoph Kuppe, Javier Perales-Patón, Julio Saez-Rodriguez, Rafael Kramann. Nephrol Dial Transplant 2022
Christoph Kuppe, Javier Perales-Patón, Julio Saez-Rodriguez, Rafael Kramann. Nephrol Dial Transplant 2022
Single-cell chromatin accessibility landscape in kidney identifies additional cell-of-origin in heterogenous papillary renal cell carcinoma.
Qi Wang, Yang Zhang, Bolei Zhang, Yao Fu, Xiaozhi Zhao, Jing Zhang, Ke Zuo, Yuexian Xing, Song Jiang, Zhaohui Qin,[...]. Nat Commun 2022
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Heterogeneity of tumor microenvironment is associated with clinical prognosis of non-clear cell renal cell carcinoma: a single-cell genomics study.
Wen-Jin Chen, Hao Cao, Jian-Wei Cao, Li Zuo, Fa-Jun Qu, Da Xu, Hao Zhang, Hai-Yi Gong, Jia-Xin Chen, Jian-Qing Ye,[...]. Cell Death Dis 2022
Wen-Jin Chen, Hao Cao, Jian-Wei Cao, Li Zuo, Fa-Jun Qu, Da Xu, Hao Zhang, Hai-Yi Gong, Jia-Xin Chen, Jian-Qing Ye,[...]. Cell Death Dis 2022
Mapping the human kidney using single-cell genomics.
Felix Schreibing, Rafael Kramann. Nat Rev Nephrol 2022
Felix Schreibing, Rafael Kramann. Nat Rev Nephrol 2022
High-resolution Slide-seqV2 spatial transcriptomics enables discovery of disease-specific cell neighborhoods and pathways.
Jamie L Marshall, Teia Noel, Qingbo S Wang, Haiqi Chen, Evan Murray, Ayshwarya Subramanian, Katherine A Vernon, Silvana Bazua-Valenti, Katie Liguori, Keith Keller,[...]. iScience 2022
Jamie L Marshall, Teia Noel, Qingbo S Wang, Haiqi Chen, Evan Murray, Ayshwarya Subramanian, Katherine A Vernon, Silvana Bazua-Valenti, Katie Liguori, Keith Keller,[...]. iScience 2022
Single-cell transcriptomics: a novel precision medicine technique in nephrology.
Jisoo Kim, Jihwan Park. Korean J Intern Med 2021
Jisoo Kim, Jihwan Park. Korean J Intern Med 2021
Decoding myofibroblast origins in human kidney fibrosis.
Christoph Kuppe, Mahmoud M Ibrahim, Jennifer Kranz, Xiaoting Zhang, Susanne Ziegler, Javier Perales-Patón, Jitske Jansen, Katharina C Reimer, James R Smith, Ross Dobie,[...]. Nature 2021
Christoph Kuppe, Mahmoud M Ibrahim, Jennifer Kranz, Xiaoting Zhang, Susanne Ziegler, Javier Perales-Patón, Jitske Jansen, Katharina C Reimer, James R Smith, Ross Dobie,[...]. Nature 2021
The Nuclear Receptor ESRRA Protects from Kidney Disease by Coupling Metabolism and Differentiation.
Poonam Dhillon, Jihwan Park, Carmen Hurtado Del Pozo, Lingzhi Li, Tomohito Doke, Shizheng Huang, Juanjuan Zhao, Hyun Mi Kang, Rojesh Shrestra, Michael S Balzer,[...]. Cell Metab 2021
Poonam Dhillon, Jihwan Park, Carmen Hurtado Del Pozo, Lingzhi Li, Tomohito Doke, Shizheng Huang, Juanjuan Zhao, Hyun Mi Kang, Rojesh Shrestra, Michael S Balzer,[...]. Cell Metab 2021
The study of single cells in diabetic kidney disease.
Harmandeep Kaur, Andrew Advani. J Nephrol 2021
Harmandeep Kaur, Andrew Advani. J Nephrol 2021
Molecular characterization of the human kidney interstitium in health and disease.
Daria Barwinska, Tarek M El-Achkar, Ricardo Melo Ferreira, Farooq Syed, Ying-Hua Cheng, Seth Winfree, Michael J Ferkowicz, Takashi Hato, Kimberly S Collins, Kenneth W Dunn,[...]. Sci Adv 2021
Daria Barwinska, Tarek M El-Achkar, Ricardo Melo Ferreira, Farooq Syed, Ying-Hua Cheng, Seth Winfree, Michael J Ferkowicz, Takashi Hato, Kimberly S Collins, Kenneth W Dunn,[...]. Sci Adv 2021
Targeted Single-Cell RNA-seq Identifies Minority Cell Types of Kidney Distal Nephron.
Lihe Chen, Chun-Lin Chou, Mark A Knepper. J Am Soc Nephrol 2021
Lihe Chen, Chun-Lin Chou, Mark A Knepper. J Am Soc Nephrol 2021
Single cell transcriptional and chromatin accessibility profiling redefine cellular heterogeneity in the adult human kidney.
Yoshiharu Muto, Parker C Wilson, Nicolas Ledru, Haojia Wu, Henrik Dimke, Sushrut S Waikar, Benjamin D Humphreys. Nat Commun 2021
Yoshiharu Muto, Parker C Wilson, Nicolas Ledru, Haojia Wu, Henrik Dimke, Sushrut S Waikar, Benjamin D Humphreys. Nat Commun 2021
Integration of spatial and single-cell transcriptomics localizes epithelial cell-immune cross-talk in kidney injury.
Ricardo Melo Ferreira, Angela R Sabo, Seth Winfree, Kimberly S Collins, Danielle Janosevic, Connor J Gulbronson, Ying-Hua Cheng, Lauren Casbon, Daria Barwinska, Michael J Ferkowicz,[...]. JCI Insight 2021
Ricardo Melo Ferreira, Angela R Sabo, Seth Winfree, Kimberly S Collins, Danielle Janosevic, Connor J Gulbronson, Ying-Hua Cheng, Lauren Casbon, Daria Barwinska, Michael J Ferkowicz,[...]. JCI Insight 2021
Single-cell analyses of renal cell cancers reveal insights into tumor microenvironment, cell of origin, and therapy response.
Yuping Zhang, Sathiya P Narayanan, Rahul Mannan, Gregory Raskind, Xiaoming Wang, Pankaj Vats, Fengyun Su, Noshad Hosseini, Xuhong Cao, Chandan Kumar-Sinha,[...]. Proc Natl Acad Sci U S A 2021
Yuping Zhang, Sathiya P Narayanan, Rahul Mannan, Gregory Raskind, Xiaoming Wang, Pankaj Vats, Fengyun Su, Noshad Hosseini, Xuhong Cao, Chandan Kumar-Sinha,[...]. Proc Natl Acad Sci U S A 2021
SARS-CoV-2 Causes Acute Kidney Injury by Directly Infecting Renal Tubules.
Zhaohui Chen, Junyi Hu, Lilong Liu, Rong Chen, Miao Wang, Ming Xiong, Zhen-Qiong Li, Yi Zhao, Hong Li, Chuhuai Guan,[...]. Front Cell Dev Biol 2021
Zhaohui Chen, Junyi Hu, Lilong Liu, Rong Chen, Miao Wang, Ming Xiong, Zhen-Qiong Li, Yi Zhao, Hong Li, Chuhuai Guan,[...]. Front Cell Dev Biol 2021
Current Methodological Challenges of Single-Cell and Single-Nucleus RNA-Sequencing in Glomerular Diseases.
Dries Deleersnijder, Jasper Callemeyn, Ingrid Arijs, Maarten Naesens, Amaryllis H Van Craenenbroeck, Diether Lambrechts, Ben Sprangers. J Am Soc Nephrol 2021
Dries Deleersnijder, Jasper Callemeyn, Ingrid Arijs, Maarten Naesens, Amaryllis H Van Craenenbroeck, Diether Lambrechts, Ben Sprangers. J Am Soc Nephrol 2021
Single cell derived mRNA signals across human kidney tumors.
Matthew D Young, Thomas J Mitchell, Lars Custers, Thanasis Margaritis, Francisco Morales-Rodriguez, Kwasi Kwakwa, Eleonora Khabirova, Gerda Kildisiute, Thomas R W Oliver, Ronald R de Krijger,[...]. Nat Commun 2021
Matthew D Young, Thomas J Mitchell, Lars Custers, Thanasis Margaritis, Francisco Morales-Rodriguez, Kwasi Kwakwa, Eleonora Khabirova, Gerda Kildisiute, Thomas R W Oliver, Ronald R de Krijger,[...]. Nat Commun 2021
"SLC-omics" of the kidney: solute transporters along the nephron.
Spencer Lewis, Lihe Chen, Viswanathan Raghuram, Syed J Khundmiri, Chung-Lin Chou, Chin-Rang Yang, Mark A Knepper. Am J Physiol Cell Physiol 2021
Spencer Lewis, Lihe Chen, Viswanathan Raghuram, Syed J Khundmiri, Chung-Lin Chou, Chin-Rang Yang, Mark A Knepper. Am J Physiol Cell Physiol 2021