A citation-based method for searching scientific literature

Martin Steinegger, Markus Meier, Milot Mirdita, Harald Vöhringer, Stephan J Haunsberger, Johannes Söding. BMC Bioinformatics 2019
Times Cited: 229



Stefan Seemayer, Markus Gruber, Johannes Söding. Bioinformatics 2014
Times Cited: 220




List of shared articles



Times cited

Interpreting Potts and Transformer Protein Models Through the Lens of Simplified Attention.
Nicholas Bhattacharya, Neil Thomas, Roshan Rao, Justas Dauparas, Peter K Koo, David Baker, Yun S Song, Sergey Ovchinnikov. Pac Symp Biocomput 2022
0

Enhancing protein inter-residue real distance prediction by scrutinising deep learning models.
Julia Rahman, M A Hakim Newton, Md Khaled Ben Islam, Abdul Sattar. Sci Rep 2022
1

SPOT-Contact-LM: Improving Single-Sequence-Based Prediction of Protein Contact Map using a Transformer Language Model.
Jaspreet Singh, Thomas Litfin, Jaswinder Singh, Kuldip Paliwal, Yaoqi Zhou. Bioinformatics 2022
3

A-Prot: protein structure modeling using MSA transformer.
Yiyu Hong, Juyong Lee, Junsu Ko. BMC Bioinformatics 2022
1

Protein language-model embeddings for fast, accurate, and alignment-free protein structure prediction.
Konstantin Weissenow, Michael Heinzinger, Burkhard Rost. Structure 2022
2

Deep learning geometrical potential for high-accuracy ab initio protein structure prediction.
Yang Li, Chengxin Zhang, Dong-Jun Yu, Yang Zhang. iScience 2022
0

Protein Contact Map Refinement for Improving Structure Prediction Using Generative Adversarial Networks.
Sai Raghavendra Maddhuri Venkata Subramaniya, Genki Terashi, Aashish Jain, Yuki Kagaya, Daisuke Kihara. Bioinformatics 2021
3

Analyzing effect of quadruple multiple sequence alignments on deep learning based protein inter-residue distance prediction.
Aashish Jain, Genki Terashi, Yuki Kagaya, Sai Raghavendra Maddhuri Venkata Subramaniya, Charles Christoffer, Daisuke Kihara. Sci Rep 2021
11